Ccol008016.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- ATF2
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000080.1:7836996-7839324[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-11 1.6e-08 35.2 6.9 2 65 319 382 318 382 0.94
Sequence Information
- Coding Sequence
- ATGGCAGATAGTGAGAAACCTTTTACTTGTTCATCACCAGGTTGCAATATGAATTTTACAAACGAAGATCAGTTATCTGTACATAAAAAAAAGCACGACATGATGTTGAACTTAGGAAGTGGTTCTAAGAATGTTGGTTTCATGGCCGATCAGACTCCAACTCCGACGCGTTTCATCAGAAACTGCGAAGAAGTAGGGTTATTTCAAGATTTACAAAATGTGAACCCGTTCGAGGAAACATTCAGGAGGGCAGTAGAATCGGGAAACACTGGTACACTTACAGTACCGGAGGCTGGGATTACAGACGATACTCTACACACTCCCCATATATTTCCTCACATAACAGATGTGCTGCCTACCGGTAATCAAATTCTGCCAGAGAACAGCATTCAGGAATGCACCAGCAGCATCTCGATCACAGAAAACAGTACAGACGAACGAACCACTGTTGACACAGAAGTCTGTAGCAGCATGAAACTCTCTGTATCGAACAAGCAAGATTTAACGAAGGATAAACTAACGACAGAGAAAACCGAAACGCTTacagaaaatattattcatCAAGTTACAAGCACACCAATAATACCTAAGATTTTACAAGAACGGCCAACTCCGCAATTATCAATAAATGGAGAAGAAGTGCAGCTACTTTTGAAAACTTCCGACGGTAAACTGATGCAGCTGTCTGCAATTCCAATTTCCGGTTCTAGTAACGCTAATACCGTACAACCACCGAAACATCCAACAGTTGTGATAAAGACAGAGCCTCCTTTGCAATATACGACAAAAGGGGATTTCGAGAAGTCGGATTCAATGTTATCCTTGGCAAAAATGAaattgaaacaagtattaaCAAAAAGTACGGACTTGAAAAATCTGAGAACCGAGGACAGCTCAGGGAGAAACGAGTTTAGCAATTCGAAGAAACAAAATCGTGGCAAGACGATGGAAGAGCAGATAAAAAAGAAAGACATCCTTGAACGGAACCGTGCCAGTTCGATGAGGGCAAGAGCCAAAAGAAAAGCGTGGATACAACAGCTCGAAAGGACGGTCGCGAATGTGAATGAAACGAACGTGGCCCTGCAAATGGAAATAAAGGTTTTACGAGCAGAGGTCGCCAAGTTGAAGACTCTGCTATTGGCCCACAAAGATTGCCCAGTCACGAAGGCGATGCAGAAAGGGAGTAGCATAGTACTGGGCCCCAAAGTAATATCGTTGAATTCGGATCTGATGGCCAATCCGACAACCCCAATGGGAATTTTGATGAAGCGACCGACATCGTATTCTTCCGCAGAAGCATCTGTCGTGCCGAAGAAAAAATTATGTATGGCGCCTTTGAAAAACCCGATTATCTTCCCAAAAGTAGATTCCAACACGAGCATTTCATTTTCTAACGCGACATTTATCAAAACGATGCCTGCCATCAAGCTCATGGGCGTCAATCAGCTTTTAACGGAAACGAAGGAAGCCAAGCAGATTTTAATCATGCAAAATCCACGGAGGAAAATAGTGAAGTCCACTAAACAAATAATTCAGATTAACCCTAATTACGAGACAGAATTAGGTGACACGAAAAGCGCCGGAACGTAA
- Protein Sequence
- MADSEKPFTCSSPGCNMNFTNEDQLSVHKKKHDMMLNLGSGSKNVGFMADQTPTPTRFIRNCEEVGLFQDLQNVNPFEETFRRAVESGNTGTLTVPEAGITDDTLHTPHIFPHITDVLPTGNQILPENSIQECTSSISITENSTDERTTVDTEVCSSMKLSVSNKQDLTKDKLTTEKTETLTENIIHQVTSTPIIPKILQERPTPQLSINGEEVQLLLKTSDGKLMQLSAIPISGSSNANTVQPPKHPTVVIKTEPPLQYTTKGDFEKSDSMLSLAKMKLKQVLTKSTDLKNLRTEDSSGRNEFSNSKKQNRGKTMEEQIKKKDILERNRASSMRARAKRKAWIQQLERTVANVNETNVALQMEIKVLRAEVAKLKTLLLAHKDCPVTKAMQKGSSIVLGPKVISLNSDLMANPTTPMGILMKRPTSYSSAEASVVPKKKLCMAPLKNPIIFPKVDSNTSISFSNATFIKTMPAIKLMGVNQLLTETKEAKQILIMQNPRRKIVKSTKQIIQINPNYETELGDTKSAGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360673;
- 90% Identity
- iTF_00360673;
- 80% Identity
- -