Ccol025801.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- XBP1
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000370.1:3025400-3027334[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-14 1.2e-10 42.1 15.7 2 62 84 144 84 149 0.94 2 2 3.4 4.7e+03 -1.5 0.3 35 49 207 221 205 225 0.76
Sequence Information
- Coding Sequence
- ATGAATGTTTTGAAGAGCGTCGTCATCGCACTGCCCAAGGGCCTGTCCAAGACGCCTAGCCTCGTCTCCGACAACCAACTATCGAAATCATtgacgaaatttaattttactaccTCTATATTGACGGACAAGTCGAACATGGACACGAAGAGAATGACCAAACACGAAGAGGTCCAGGATGAAGGCATGCTATTCAAGACAGATGTGTGCGTCCGTGGAAAAAAACGTCGATTGGATCACTTAACGTGGGAAGAAAAACTGCAACGAAAGAAACTGAAAAATAGAGTAGCGGCTCAGACTTCTAGGGATCGCAAGAAGGCTAAACTAGACGAATTGGAAGATACAGTTAGAACGTTAAGGGAACAGAACGATTTGTTGATGCAAGAGTGTACTATGTTGAGGTCACAGAACGAGTTGTTGGTCACAGAAACAAAGAGATTGAGGAAGGATAAGGATACGAAGAGCGCAGAAGTGTCTATCTGTTCGATGTGCCAGAGTCGTGTCGGTTGTGCTGTATCGCCGCTGGGATCTACAGTGTCCCCCGCATACCCTCTGCAGCAGGGTGGAACAACACAGCTGGCACCGTCTCTGACGCTAACCCCAGGAGACGATTACATCGAACGACTTGAAGAACTTGCAGAAAGCCTTTTGCGAGAGGTTACCGCAGAAGTGGAAGCAAATCCTTGTAGAACAAATGAACAAGTGTCAGTCAAGAAAAATACCATTGAGAAACGTGACCATACGAAAGGAGTGGTGGGGCAGGCATCAAAAAATGTGGAAGCCGATCGAACCTCTAGAAGCATGAGCTCGTACGACGAACTGTGGCATCCTGTTACCAGCACAGTCGCTACACCATGTACCGTCAACACAAGCGCACCTCCAGTGTCAATAAAGTCGGAAGTCGAAGTAAAACAAGAAGTCGATACGCACGATTTGGACACCGTTTACGGCACTTACGACGAAACTACAAATTCCATAACGATCATTTATCCGGGCGACGAGAGCAACGTGGGCATTCAAGAGTGCGTTCAGGAAGTAAGCACGGACGGTGGTTGCTTGACCGAGGACTCGTCGTACGTCACGTCCAATTATTATTACTCCCATAAATTGTCACCGTCCTACACATGCACGGATTCTATGTCACCGTCGAGCATATATTCCGCAGACACGGATAATGGCTTTACACCCACGAAATTAGACTCGAACGCGTCCGACTGCGGATACGAGTCGCATAATTCACCGACGCCCGATATCCGTAACGAAAAAACTACAGTGGCCCTGTCCGACCTTTGGCACGAAAGCTTTTCCGAATTATTCCCAACGTTAGCCTGA
- Protein Sequence
- MNVLKSVVIALPKGLSKTPSLVSDNQLSKSLTKFNFTTSILTDKSNMDTKRMTKHEEVQDEGMLFKTDVCVRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRTLREQNDLLMQECTMLRSQNELLVTETKRLRKDKDTKSAEVSICSMCQSRVGCAVSPLGSTVSPAYPLQQGGTTQLAPSLTLTPGDDYIERLEELAESLLREVTAEVEANPCRTNEQVSVKKNTIEKRDHTKGVVGQASKNVEADRTSRSMSSYDELWHPVTSTVATPCTVNTSAPPVSIKSEVEVKQEVDTHDLDTVYGTYDETTNSITIIYPGDESNVGIQECVQEVSTDGGCLTEDSSYVTSNYYYSHKLSPSYTCTDSMSPSSIYSADTDNGFTPTKLDSNASDCGYESHNSPTPDIRNEKTTVALSDLWHESFSELFPTLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -