Ccol008129.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- nfil3
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000080.1:10023918-10025297[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-14 5.4e-11 43.1 0.7 2 60 158 216 157 220 0.92 2 2 1.1 1.5e+03 0.1 0.0 32 52 419 432 411 435 0.57
Sequence Information
- Coding Sequence
- ATGGTGGCAGAATTTGTCGCCCGTCAGAGTGGATCGCCCATTAATGGTGAGACCGCGTGTCTGAACAGCAACATGCCGGCCACCCACACTATGGCGCACACCGGCCACGGTGGTCACGGCGCTCACGATGCCCATGGTCCGTTGCCTCCGTTGACGCATCCGGCCCACCATGCTGGTCCGCCGTCcatgcaacaacagcaacaccaGCATCAGCCTCAGCAACCGCCGCCGCAGCAGCAGCCGCCGCAAcaccaccaccaccatcaccaacaacagcaacagcaggcacagcagcagcaacagcagcagcagcagcagcaacagcagcagcaacagcagcagcagcagcagcatcacCTTCACGATGCCCAACAGGTGATACATCCTGAAAATTTCCCCCCGAACTTCGACATCAGAAAAGAGCTATTTTCTCAGCGCAAGCAACGAGAGTTCATCCCGGACAACAAGAAGGACGACAGCTACTGGGACCGTAGGAGGCGCAACAACGAGGCTGCCAAGCGGTCTCGCGAGAAGAGGCGTTTCAATGACATGGTGCTCGAGCAGCGAGTGATGGAGCTCAGCAAAGAGAACCATATCTTGAAGGCGCAACTCGAGGCGATACGGGACAAATTCGGTATATGCGGCGAGTCCGTGATCAGCACGGAACACGTCCTCGCGGCCTTACCCACCGAACCTCCCATTAGCGTCAAGAGAGCAAAACTCCCAGCCTCGACGGCCCTCCTCTATGCCAGGACACCCAGTCCAGTGCATACGTCCGTAATTCATCAGCCTGTCAGCGGGGCTCGGTCACCCAGGTCACCCGCTCAGCTCTACGTGCCCGAGACGACCGCCTATCCCGAGACGGAGAGTTTCCAATATCCCTATCCTCATCCAGCGATGCATCTAGACACGACGAGCGCGTTGAACCTGTCCCGCGGACGACGCGCTCAGTCGCCGTTCGAACTGTCGTCCGGGAGCGGCGACGAGGGTCCCCAGTTGGTGGTCAGTTCCCAGAATCCAGCAGCTAACAACAGTTTGCCCCACAAGTTGAGGCACAAGTCGCGCATCGGCGACAAGGATGCAGCCAGCGCGCTGCTGGCCCTCCAAGGTATAAAACAGGAACCCGGGCCAAGAGCGTCGCCGCCATGGGACAACGAGGGCTCCAGCGACGAACGTGATTCCGGCATTTCCTTGGGCGCCGAATGGACGGGCCCCACCGTGTCCGCTGTTCCTGAAAGCGAGAGGGAGGTCAAGTCGAGACTGGACCGCCTTGCCTCCGAAGTAGCTTCCCTTCAGTCGATATTCCGCCTTGGGAAACCGGCCGACAGTTTGGTCACGGGACATCCGCTCCCCGCGAACGCAACCGTCAGTGGCCCGTGA
- Protein Sequence
- MVAEFVARQSGSPINGETACLNSNMPATHTMAHTGHGGHGAHDAHGPLPPLTHPAHHAGPPSMQQQQHQHQPQQPPPQQQPPQHHHHHHQQQQQQAQQQQQQQQQQQQQQQQQQQQQHHLHDAQQVIHPENFPPNFDIRKELFSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVMELSKENHILKAQLEAIRDKFGICGESVISTEHVLAALPTEPPISVKRAKLPASTALLYARTPSPVHTSVIHQPVSGARSPRSPAQLYVPETTAYPETESFQYPYPHPAMHLDTTSALNLSRGRRAQSPFELSSGSGDEGPQLVVSSQNPAANNSLPHKLRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDNEGSSDERDSGISLGAEWTGPTVSAVPESEREVKSRLDRLASEVASLQSIFRLGKPADSLVTGHPLPANATVSGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513230;
- 90% Identity
- iTF_00024401;
- 80% Identity
- -