Ccol006099.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- ATFC
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000078.1:30505304-30509986[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8 2.5e+03 -0.6 0.0 39 60 115 136 110 139 0.82 2 2 5.7e-15 7.9e-12 45.8 11.0 2 63 278 339 277 341 0.95
Sequence Information
- Coding Sequence
- ATGCCATCGAGTCAGGGCCAAGAGATGTGGTCATGGAAGTTCGAGCCAGTCTCCCCTAAGGGGGCATCGTCATCCGATGTAGAAGACGATTGGCTCTTATTTGATGATAAATCTGTAGAGCCTACTAAAAATGTTGTTAAACCAATATACGATGATCATCCCACCCGTGCACAAGTTGCTACAAAACTTTTAGAAGAACTAAATGAATGGATTAAAGAAGaGCCTTTTTCAGACTGGTTAGAGGAAAAAATTGAGCTACCCATTTTTGAGGAATTGCCAGTGTCTGAAAGTGGACAACTTAAATCAACGTCATACAATGAAGTTACTAAAATTCCCCAGCAAGATCACACACAAACTCTGTTGCAAGAGTTTGAAACAGTTCTCGAAGATGTGGAAGCTTGCCATCAAATAGTCCCTACATCGAGTTCTACGCTTACACCCCCCCAATCGCCTCCACCACATAAACCATTAAGCGTGGATACCCAACTACTTGTTACTTTACAACCTATACAACCATTGTATTCTAATCATCAATCCACATATGATGTGGTAGTTTTTGAGGAAAAATCGTATATTAATGAAGTACCTGTACAGTGGAACACAAAAAATATATCATTGGATCCATTAAATGCGGATGTTGCACATGACTTAGCTGTAGTGGATGAATATGTACGTTTACATACTGAAGATATTCCACCATCTAGTCCGTGTACAAGCTCTGGCGGTAGTTACACTTCATCGGAAGATTCTGTGGACGATCCAGATTGGATATTGAAATCCGGTAGGAAATCTACCAGAAATCGTCAGAAACCTTACTCCCGCCCGTCTGTAGAAGATAAAAAAGTCCGTAAAAAGGAACAAAACAAAAATGCAGCAACGCGTTATAGGCAAAAGAAAAAACAAGAAATAAAAGAGATATTGGGCGAAGAACGTGAACTTGCGGatcataatgaaaaattaaagaatcaAGCGAAAGATTTGCAACGAGAAATTGGGTATTTAAAGGGCTTGATGAGAGACTTATTTAGAGCCAAGGGTCTGATCAAATAA
- Protein Sequence
- MPSSQGQEMWSWKFEPVSPKGASSSDVEDDWLLFDDKSVEPTKNVVKPIYDDHPTRAQVATKLLEELNEWIKEEPFSDWLEEKIELPIFEELPVSESGQLKSTSYNEVTKIPQQDHTQTLLQEFETVLEDVEACHQIVPTSSSTLTPPQSPPPHKPLSVDTQLLVTLQPIQPLYSNHQSTYDVVVFEEKSYINEVPVQWNTKNISLDPLNADVAHDLAVVDEYVRLHTEDIPPSSPCTSSGGSYTSSEDSVDDPDWILKSGRKSTRNRQKPYSRPSVEDKKVRKKEQNKNAATRYRQKKKQEIKEILGEERELADHNEKLKNQAKDLQREIGYLKGLMRDLFRAKGLIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00965804;
- 90% Identity
- iTF_00360663;
- 80% Identity
- iTF_00360663;