Ckir019678.1
Basic Information
- Insect
- Collessia kirishimana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035078785.1
- Location
- JAWNPV010046155.1:1-806[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-19 4.4e-16 59.1 0.0 1 43 37 80 37 82 0.95 2 3 8.6 2.3e+04 -4.0 0.1 4 9 171 176 171 177 0.80 3 3 0.084 2.3e+02 2.4 0.0 22 35 189 202 188 205 0.90
Sequence Information
- Coding Sequence
- GCCCATGGCCACCTGtcacagcaccaccagcagctgaGTGCCCAGGAGGCGGCCGCCTTGGCAGCTGGCAAGGGCACGCGTCCAAAGCGTGGCAAGTACCGCAACTACGACAGAGACAGCCTCGTGGAGGCGGTCAAGGCCGTGCAGCGGGGCGAGATGTCCGTGCACCGAGCCGGCAGCTACTACGGGGTGCCCCACTCAACGCTCGAGTACAAGGTCAAGGAGCGGCACCTGATGAGGCCACGCAAGCGCGAGCCCAAGCCGCAGCCGGATCTGGTGGGGCTAACAGGCGCCGCCAACAAGGTGAACGCCCACCTACACCTGGACAAGCTGAAGCCGGCAAGCAACTCCAAGCTGAGCAACGCCCTCAAGaacaacagccaggcagcggcTGCCGGAGCTGCTCCCAATGGACTCAAGCTGCCCATCTTTGATGCGGCTCCTCAGCTTTCCTTCCAGCCCAACATGTTCTGGCCCAACAATGCCGCCAACTATGGTCTGGACTTCAACCGGATGGCCGAGGCCATTCGCAATCCCGGCAGCGCCAACAGTCCGCTGGGCGTGGCTGCCAACCATCATGGGGTGAACGTGAGTGCCCTGGAGATGGCCGAGAACATGTACGACGGCATCATACGCAAGACCCTGCAGAACGACGTCACCacgtgcagcagcaacagtggcaacggTCACGGAAACGCCCTTCTCGACCAGCTGCTGGTGAAGAAGACACCTCTCCCGTTCACCAACAACCGCAGCAATGACTACGCCGCCGCCTGTTCCAGCTCCGACAGCAACAAGCGAGCCGG
- Protein Sequence
- AHGHLSQHHQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNAHLHLDKLKPASNSKLSNALKNNSQAAAAGAAPNGLKLPIFDAAPQLSFQPNMFWPNNAANYGLDFNRMAEAIRNPGSANSPLGVAANHHGVNVSALEMAENMYDGIIRKTLQNDVTTCSSNSGNGHGNALLDQLLVKKTPLPFTNNRSNDYAAACSSSDSNKRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -