Ckir001147.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Collessia kirishimana
Gene Symbol
ct
Assembly
GCA_035078785.1
Location
JAWNPV010000284.1:1-24909[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-27 5.3e-23 81.6 0.0 3 72 1132 1202 1130 1207 0.95

Sequence Information

Coding Sequence
CGCGCTACTCTAGCCGAGAAGGAAGTGAATACATTGAAGGAGCAACTATCGACTGGGACGcccggcagcaacagcgataacaacaacagcacatcAGCAACAGGCACAGTAGAttcagcagccacagccaccgcagcagcagcagccgcagcagcagcagcagcggcagcggcagtagcagGAGCCATAGGAGCTCCGGCAGCATCAGGTCACGAGGATCACGATCAATTGGAGCTGGCCGAGTTGGCCACCAGTGACAGTGAGAAGCTATTGAACAGCTCAATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGTGGCAACCTGCTGGCCAACACAAATAccccgtcgccgtcgccgcccCTGCTGAGCgccgagcagcagcaacagttgcagaCGAGTCTCCAGAacggcgttggcgttggcggcgCCTGTCTCAATCCCAAGCTCTTCTTCAATCACGCCCAGCAGATGATGATGGAGGCGGCAGCtgcggcagccgcagcagccctgcagcaacagcagcaacaacagtcgccGATGCACTCGCCAGCCGGTTCGGGAACTGGAGCCGTCAATGCACAGCAAGTGGGTGatgcagcagccaccacagcaGTCGCTGGCAACAGTTGcattggcagcggcagcagcagcaccagcggcggtggcggcaacaataacagcaacaatgctGTTGCCGATGTGGATGATGAggacgatgaggatgacgacgatgaggaggaggaggaaaatgcCTCAAATGTGGCGCATTTGGATGATGAGGACATGGAACTGGAGGCCGAGGCCGAGGCGAATGCTGAATCCATTGGCAATGAGGCTGAGGCAAGAACTGAGGGCAGGGCAACgccacagcggcagcagcatgtTGCTGACAATGTTGACAACattgacgatgatgacgaggaTGTTGCCGTTCGCTTGGCAGAGCcaaacgatgacgatgatgatgatgatgatgatgatgacgatgaggaaGCTAGTTTAAATGTTAGCAATAATCATAATACCGATAGCAATAATAGTTGTAGTcgcaagaacaacagcaaaaacagcaacagtgaacagcagcaacatgttgccatgCGTGATAATAATGATAGtgagcaacatgttgcccatTGTGCTGAGGACGACGActgcaccaacaacaatactaacaacaacaacaacaacagcaccaacaacaacaataacaataacaacagcagcaacaataataataacaacaacagcagcagcaacaacaatgagaagCGCAAGAAGCgcaacgccagcaacaacaataacaacaacaacaataacaacaatcaaccCGCTGTTTTACTAGCCGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAACTGCAACGTTTACGTGCCCTGGAACAGACTCATCTCGTACAAATCCAACGGCTCGAGGAACATCTAGAGGTCAAGCGACAGCACATTATGCGCCTTGAAGCTCGCTTGGACAAGCAACAGATCAATGAGGCTCTCGCCGAGGCAACAGCCCTGGCCGCTGCTACTGtcacaagcagcaacaacaataataacagcaataacaacaacagcagcattagccagagcagcagcgacaacaacctGAGCCACAgtgcgacagcaacagcggccaCAATCACTGCAACAAGCggctcaacagcaacaacatcgcTAGAGGAATCGACTGCCAATGACTTGTCCATGTATAAATCCAGCTCACATACTCATTCCCATACGCATAATCTGGACAACGATGCTGGCGACGATGATGATCAGGCCATGCTTATCGATGcccatgacgatgatgatgatggcggcATTGATCGCTCACATCGTCATGAATTGGATGACGAGGAGCCCGAGGATCAGGACAATGATCTATCgaatgccacagccacagcggAGAGCAATGAgttgaaaatcaaaaaggaACAACACAGTCCACTGGATCTGAATATTCTGAGTCCACAATcagcaattgctgctgccacagcggctgctgcagctgccgcctGTGCCAATGATCCCAACAAGTTTCAGGCTCTGCTATTGGAACGCACCAAGGCATTGGCCGCTGAGGCTCTCAAGAATGGCGCCAGCAGTGATCATCCGGCGCATACAGTCAGCGATGCGCCACAAACTGAGATTGAAACACTACACGATCTGGTCAAGCAGCCCAAAATCGAGCTTGAAGATGTCGAAGagaatgacaatgacaatgagaATGACGATGGcgacgctgacgctgatgctgatgccgatgtTGTCCAGTCCACCTTGGAAGAGCAACTGGTCAATAGCTATTGGCGTCGCGGCTTTGAAACGcccacagcaactgcagccggagcagcagcaacaacagcagcaacagctatagCAACTGTCACAGCTCCAGGATGCAAAACGCCAACAAATTATcaaaatgccaatgccatacaacaacaacaacaacaacagcagcagcaacagcagcaacatcaagcAGCATTGCTGCCACCTCCTCCACCGCCACCTCCATTGCCGCCACAGCAACCACactatcaacagcagcaacagcagcaacaacagcaacagcagcagcagcaacatggacCTTCGTCCACAGCCTTGCTGAGTCAATTGGTTAACTCAACTTTCTCTTGTTCCAATTCCAATCGCTTAGATGCCGTTAACCAGCACCACAACCATaaccatcagcagcaacagcagcagccacacctGCCAcaccatcaccagcaccagcaccagcagcagcagcaacagcaacagctgtcaggcagcggcggcagcagcaatccagccagcaacagcagcaacagcgactcGCTgagccatcaccatcatcatcactctGCCGCTGGCCACCATCACGGCTCCCTCTTACAgcaggcagccgcagcagcggCCGCTGCCCACCATCTGCACCATGGCGGCGCCGACAGTTCCAACTCCTCAAGCGCCAACAGCACACCGAACAGTACCGCCCAGCTGGCAGCCAGTTTGGCCAGTTCCCTCAACGGCAACAAGTCGCTGCTGCAGGCAGCCGCCGTGgcagccgttgccgttgccgaggacaacaacaacagcctgTCGATGGCCGCCCATGCCCAGCATGCGGCTGCACTCGGTGCTCCCGGCTTTCTGCCCAATCTGCCCAATCTGCCCGGTCTGCCGGCCTTCCAGTTCGCAGCCGCCGCTGCAGCCGGCCAAGAGGCTCGAGCCCACTATCGCTTCTCCGATGCCGAACTGCAGCTACCGCCCGGCGCCTCAATGGCCGGCCGTCTCGGCGACTCCCTCATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCCCTCGACACGCTCCACATATCGCGTCGCGTACGCGAGCTGCTCTCCGTACACAACATTGGGCAGCGCCTGTTCGCCAAATACATCCTGGGACTGTCGCAGGGCACCGTATCGGAGCTGCTGAGCAAACCGAAGCCCTGGGACAAGCTGACCGAGAAGGGTCGCGATAGCTATCGCAAGATGCACGCCTGGGCCTGTGACGACAATGCCGTCATGCTGCTCAAGTCCTTGATACCCAAGAAAGCTAAACTAGTTAAACTGTTTTATGGTCGCAACTCTCCTGCCcactgcctgctggctgcttccACCTCTGACTCGGCTTGCCAACTCCTGAGTCCGGACTCCGGAGCTAATAACCAGGAGGACTACGAACCAACTAAACAGCAGGACTTTAGCCCAGCAAATGCCTATAAAATTGATCAAATCAATGGCAAAATGCGTGTGCGTCTGACTGTGGTTCCCCCTTCAGGGTTTACAGCTTAA
Protein Sequence
RATLAEKEVNTLKEQLSTGTPGSNSDNNNSTSATGTVDSAATATAAAAAAAAAAAAAAVAGAIGAPAASGHEDHDQLELAELATSDSEKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQTSLQNGVGVGGACLNPKLFFNHAQQMMMEAAAAAAAAALQQQQQQQSPMHSPAGSGTGAVNAQQVGDAAATTAVAGNSCIGSGSSSTSGGGGNNNSNNAVADVDDEDDEDDDDEEEEENASNVAHLDDEDMELEAEAEANAESIGNEAEARTEGRATPQRQQHVADNVDNIDDDDEDVAVRLAEPNDDDDDDDDDDDDEEASLNVSNNHNTDSNNSCSRKNNSKNSNSEQQQHVAMRDNNDSEQHVAHCAEDDDCTNNNTNNNNNNSTNNNNNNNNSSNNNNNNNSSSNNNEKRKKRNASNNNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAATVTSSNNNNNSNNNNSSISQSSSDNNLSHSATATAATITATSGSTATTSLEESTANDLSMYKSSSHTHSHTHNLDNDAGDDDDQAMLIDAHDDDDDGGIDRSHRHELDDEEPEDQDNDLSNATATAESNELKIKKEQHSPLDLNILSPQSAIAAATAAAAAAACANDPNKFQALLLERTKALAAEALKNGASSDHPAHTVSDAPQTEIETLHDLVKQPKIELEDVEENDNDNENDDGDADADADADVVQSTLEEQLVNSYWRRGFETPTATAAGAAATTAATAIATVTAPGCKTPTNYQNANAIQQQQQQQQQQQQQHQAALLPPPPPPPPLPPQQPHYQQQQQQQQQQQQQQQHGPSSTALLSQLVNSTFSCSNSNRLDAVNQHHNHNHQQQQQQPHLPHHHQHQHQQQQQQQQLSGSGGSSNPASNSSNSDSLSHHHHHHSAAGHHHGSLLQQAAAAAAAAHHLHHGGADSSNSSSANSTPNSTAQLAASLASSLNGNKSLLQAAAVAAVAVAEDNNNSLSMAAHAQHAAALGAPGFLPNLPNLPGLPAFQFAAAAAAGQEARAHYRFSDAELQLPPGASMAGRLGDSLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKAKLVKLFYGRNSPAHCLLAASTSDSACQLLSPDSGANNQEDYEPTKQQDFSPANAYKIDQINGKMRVRLTVVPPSGFTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-