Ckir007146.1
Basic Information
- Insect
- Collessia kirishimana
- Gene Symbol
- Arid4b
- Assembly
- GCA_035078785.1
- Location
- JAWNPV010004392.1:1-2791[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-29 1.9e-25 89.9 0.1 1 88 294 379 294 380 0.96
Sequence Information
- Coding Sequence
- CAAGCGGACGATCCGCCATCATTGCCAGTGGGCACCGAGGTTAGCGCCAAGTACAAGGGAGCCTTTTGTGAAGCAAAGGTCAGCAAGGTCGTGCGCAATATCAAAGTTAAAGTAGCCTACAAACAGGGCTTGGGCTCCGGCATTGTCTCCGACGATGCCATACGTGCGCCTCCCGGACAGTGGCGCGTGGGCGCCGTAGTGGAAGTGCGGCATCCCGACCGCAAAGAGATCGTCGAGGCCACCGTAACCAAAATACAAGATTGTTCACAATACACTGTGGTTTTCGACGATGGTGATATCACCACACTGCGACGGACAGCCCTCTGCCTCAAGAGCGGGCGACATTTCAACGAAAGCGAGACTCTGGATCAGTTACCACTAACGCATCCAGAGCACTTTGGTAATCCAGTGGTGGGCGGTCGACGAGGACGTCGCCGAGGTCATTTGAACGACGATAGCtccgacgatgatgatgagagtGATGCCAAGGAGGTGGTCAACGAAAAGGAGGAGAATATTGGCAAAGTTGTCTGTGTGGAGACCGAGTCGAAGAAAAAGGACAAGGAAAAATGGTTTCCAGCTTTGGTGGTAGCCCCCACAGCTCAGGCAACGGTGCGAATACGCGTCAAGGATGAATACCTGGTGCGTAGTTTCAAGGACGGACGCTACTATACTGTCCCCAAGAAGGAGGCCACAGAGTTTACCCGTGAGATGGCCAGCAAGCAGGATGTGCCAGCCGTACAGGCAGCCCTCGAGTTCCTGGACAGCAGCATTCTGCCACCACATTGGGATCGCGATTCTCTGTTCGGTTTGGCCAACCTCAGTAGCGAAGAAGATGCGGAAATCGATTCGGACTCATCGGACGATGAGCCACACGAGGAGAAGGATCGCTTTGTGGCCCAACTCTACAAATACATGGATGATCGCGGCACCCCGCTCAACAAGGTGCCCTCCATTCAGTCCCGCGACGTCGATCTCTATCGCCTCTTTCGCGCCGTTCAAAAGCGCGGCGGCTACAACCGCGTAACCACCCAGAATCAATGGAAACTCATCGCCCTCCGGCTGGGCTTTACGCCTTGCACAGTCAGCGTTATGAACCTGGTGAAGCAGGCCTACAAGAAATTTCTCCAACCCTATGGTGACTTTAATCGTAAACTTGGCTGCTCCATGCTGATGACCTCACGCAACTCAAATCGCAGCAAGGGCCGCAGTCTGGTCAGGGCCAATTCTGTGGCGTCGCCCAAGCCGCCAGAAATCTCCAAAACAGAATCGATCAGCAAACTCGCTTTGAGCAATCAGACGGCAGCgagtgcaagtgcaagtgctTCGTCCATACCGACAACTGCTGCCAGTCGGGCTGCTTCCCGAGCTGCCTCTCAATCTGCCGCCGAGGAATCTTCGGAAAATACCAGCGAGTCAAGTGTGGGCGGTGTGGGCGCTGTGGCCGTTCCCGTAGAGCCGGTCAAGAAGCAACGCAAAGGCTCAGCCGCCAGCGGTGGCAAAGTTAAAACATTAGTggaaaaatatgaagaaaagTCAACTGGACCGGGAGCTGGCACTGCAGCTGCATCCataacagcagcatcaacttCTTCCTCAGCATCGGTTGTTGTCTCTAAGGATGCCGAAGCTGATGTGCCGTTGGCCAAAATCAAGGCGgcttcagcagcagcctctAGGAACAGCATTGAGAAGGAAACAGCTTCCCATGCTGCAGCTACCAGCAGCAAGTCAACCACGGAGTCTCAACGCAGTCGCGATGCCTCACCAGCAGCGGGTAAGTGGTCTCTTGCTTCCACCTAA
- Protein Sequence
- QADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIRAPPGQWRVGAVVEVRHPDRKEIVEATVTKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGHLNDDSSDDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREMASKQDVPAVQAALEFLDSSILPPHWDRDSLFGLANLSSEEDAEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTTQNQWKLIALRLGFTPCTVSVMNLVKQAYKKFLQPYGDFNRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPPEISKTESISKLALSNQTAASASASASSIPTTAASRAASRAASQSAAEESSENTSESSVGGVGAVAVPVEPVKKQRKGSAASGGKVKTLVEKYEEKSTGPGAGTAAASITAASTSSSASVVVSKDAEADVPLAKIKAASAAASRNSIEKETASHAAATSSKSTTESQRSRDASPAAGKWSLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00550043;
- 90% Identity
- iTF_00804166;
- 80% Identity
- -