Ccro006741.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_905220415.1
- Location
- HG991961.1:9401549-9404626[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.53 1.3e+04 -3.8 4.6 75 85 47 57 3 104 0.45 2 4 3e-103 7e-99 330.5 6.9 1 218 211 420 211 420 0.93 3 4 0.35 8.3e+03 -3.2 0.5 71 71 479 479 424 525 0.52 4 4 0.16 3.8e+03 -2.0 1.8 66 95 648 678 605 718 0.42
Sequence Information
- Coding Sequence
- ATGGATACTACCAAGACGATGGAAACCATCGATGACCAGCAAAATTTAGAAAATAATCATCAATCTGCAGTTACAATGGAAGAAAAAGAATCGGCTCTACCTGTGATAAATGATAAGAATAGTGACAGTGATGGTAACAGTGAAGATCTTAGCAGTAATGACGATCAAAACATTGTGAATAATATCAACTCTCAGTTTTATGAGAGTAGTGATAGTAAAGTAGATTACGCTGAAAAATTAGACGATAATGACACTTTGAGTGATATTGATGACATAAAAACGGACACGGCATCCGCTGATAGTGAAGACTCTGCCCTAGGCAGTCTTCCACCGGACGGTGCACTTAATGATAGAGAGGAGGACGGACAAGACCGTTCCGATGGAAGTGATTCTGGTCTTGGATCAGAAACGGTAGAAGATGTTAAGTTACCCAGTTTCGATTTAGTATTGCCCTGCCCTGGTAACGAAGAGAGTGCTAGTAAAGAAGTCGCAAATGAGGAGAGTTCTATAAATATTCATGTTGATGCGGAAAACAATAGTCAAATTCCAGACACAGAATTGAAGAAACCCCTAAAACGATGTCTCAAGAGGAAATGCGAAGAAGAAAATATTGATGGCCCTGTTATTAAAAAGAAAAAGGAATCGATAAAATTCGACAATGTAACAGTGTTTTATTTTCCAAGAGCACAAGGGTTTTCGTGTGTGCCATCACAAGGGGGTTCTACGCTTGGTATGGAATGGGAACATAGTCACATACAGAAATTTACTTTAGCTGAACATGCTTTAGAACAAAGAAGATTGCATCGACAGATATTACAACAATTAAAGAGCGAACGGCATTCAGTTCAAGGCGTATCTCTATCATCGAGTGAAGACAGTGACACGGAAGAAGAAACTAGCGACATTTCTGAATCAGAGCTAGATTTAGATAGCTACTATTTTTTACAGCCTGTTCCTACAAGACAGAGAAGGGTCTTACTACGTGCGGCTGGAGTGAGAAAAATAGAAGGCTATGAAAAAGATGAATGTAGAGATATACGAACATCAAGAGAGTTTTGTGGATGTGCTTGTAAAGGTGTATGCAATCCCGATAGTTGCTCATGTAGCATGGCAGGCATAAAATGTCAAGTTGATAGACTTAATTTTCCATGTGGCTGTACGAGGGATGGCTGCGGCAATACATCCGGCCGAATTGAGTTTAACCCAATAAGAGTAAGAACTCATTTTATAAACACCCTAATGAGATTAGGACTCGAAAAGAAAAATGAAGAAAACCAGGAAGCTGCTAAACGACAGTGGGCTGCAGTTCATAACATCAATAATGCATCTCCGTGTATTCCGCACACATCATATAATAAAGGTCATTCGCAGAATGCTGAAAATAATACATTACATAATAGAAATTCTCTACATACTTCTCAAATAGACAATTGCATTAATATCGGAGCTTTTAACAATATTCACTGTGATGTTAATAGCTCCAACGCATCTAGAAGTATTCACGAGGATAACGTGAATCAAAAGAATGGAAAGGAACAAAATATCTTAAATTTCAGTGACAAATCGGATCATCGTAATCACGACCCCTATACATGTAGCATACTTCAAGGCAAAGGCCCACCTTATCCACTGACCAACAATATGGATTTTAATATGTCTAATAACATACAAAGATATTCGTGTGATCTCAATTACACTTATGAACAGCCGCATGACAACCATGCATTTAAATCATTACAGAGCTATTCAGCAACAAGCTTTGAAGAGTTTGCTCAAAATTCTCACATATCAATGTTCAACCCTTATGGGCACACATATACAACTGAGTATATGTGTAAATCTAATTCAAGCGTGGAGCATAACTCATTACAATACCACGGTATAGCACAAAATCACTACGATATGTATAAAAATACATCTGCGTGTGTAAGTACCCAAAATAAATCTGACTCAAATTATTCAGCGCTCATGTCGATGCCATATCAATCTAGCAATAAGTTGCAATCTGTAGATAACGATGAGAACTGGTTCAGTCAGAATACACTTCTAAACTTGGACAGCAGCGAACAAACGACGCAGGACGCTTCCGATGCGTCATCGCAGCCGACGCAAACATCGTCAGAAGGCGACGCCAGCGAGGTAACCGAAAACTTCGGGGAACTCATCAAGAAGACAATGGTAGAGTCTGTCATTGTGTAG
- Protein Sequence
- MDTTKTMETIDDQQNLENNHQSAVTMEEKESALPVINDKNSDSDGNSEDLSSNDDQNIVNNINSQFYESSDSKVDYAEKLDDNDTLSDIDDIKTDTASADSEDSALGSLPPDGALNDREEDGQDRSDGSDSGLGSETVEDVKLPSFDLVLPCPGNEESASKEVANEESSINIHVDAENNSQIPDTELKKPLKRCLKRKCEEENIDGPVIKKKKESIKFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHSHIQKFTLAEHALEQRRLHRQILQQLKSERHSVQGVSLSSSEDSDTEEETSDISESELDLDSYYFLQPVPTRQRRVLLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPDSCSCSMAGIKCQVDRLNFPCGCTRDGCGNTSGRIEFNPIRVRTHFINTLMRLGLEKKNEENQEAAKRQWAAVHNINNASPCIPHTSYNKGHSQNAENNTLHNRNSLHTSQIDNCINIGAFNNIHCDVNSSNASRSIHEDNVNQKNGKEQNILNFSDKSDHRNHDPYTCSILQGKGPPYPLTNNMDFNMSNNIQRYSCDLNYTYEQPHDNHAFKSLQSYSATSFEEFAQNSHISMFNPYGHTYTTEYMCKSNSSVEHNSLQYHGIAQNHYDMYKNTSACVSTQNKSDSNYSALMSMPYQSSNKLQSVDNDENWFSQNTLLNLDSSEQTTQDASDASSQPTQTSSEGDASEVTENFGELIKKTMVESVIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357517;
- 90% Identity
- iTF_00357517;
- 80% Identity
- -