Ccro015380.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_905220415.1
- Location
- HG991982.1:3847542-3849908[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.5 2.1e+03 -0.6 0.0 22 33 230 241 227 245 0.85 2 5 7.5e-10 9.9e-07 29.2 0.1 1 45 261 307 261 308 0.94 3 5 4.4e-10 5.8e-07 29.9 0.4 3 44 316 361 315 362 0.94 4 5 3.1e-09 4.1e-06 27.2 0.0 1 43 367 409 367 411 0.97 5 5 4.2e-09 5.5e-06 26.8 0.1 4 41 420 459 419 468 0.92
Sequence Information
- Coding Sequence
- ATGACTGATTTTGATTCGGACCTTGAGAGTGATTTAGAAGCCGAACTTGAAGATCTCAGAAGGCTCACAGCAGCATTAGAAGATGATGAACCAGGTCCCAGCAGAGGAATGTCTCAGTTTTCGGTTCATACTTCGCAATCAACAATTAATTCTGTACAAGATGATTTCATCAATATTGACACTGCCATCGCTCTAAATAAATTATACGACGAAAAACTGCAAGGTCTTGAAAAAATGCTGATAAATCGTTTAAATCAATGTAGACAGAAATTAAGAGAAGTTCAATGCACTAATAACGACGATAAAATTGAAAAACCGAATTATAACAAGTTTAAATACATTCACTGTGGTAAACCGTATTTCAAGGATGAGTTTGGTTTTCCTGCGCCCGACAATGAAGATACTTTGCTCAGAGCAAAAGCGGGAATGTATGATTTTGCTTCTATACAAGCTGTCCCTGGTTGGACTATAAAAGATAAGAATATATTAACTAAATGTATTCTTAAATTATCTAGAGAAATAAAAAGAAAGCAATTAAATTCACAACTTGCAAAAATGCAAAGGTTAAATGTAAACAAAACAAAAAAAAGTAAAGAGCATAATGAAATTCAAAAAATAAAAAAAAAATTAAATAGAATTGATAAAATGCCTCTTAAACTAGTAGCTCTACCCATTGATGAAGAGTATGACTGGGATTTTGTTGCGAAAAAATTAAACCATAGACATAGACCTCAAGAATTTAGAGCGTTATGGAAACTCTTTTTACATCCTTCAATAAATAAAACTCCTTGGTGTGAAAAGGAGGATACAAAACTACAGGATATTGTTAAAGAGAAAGAATATCAAGATTGGGATGCTATAGCTAAAGAATTAAATACAGGACGAACTGCCTATCAGTGTTTTGTATACTTCCGTACTAATATGGGGAACAATTTTATTTTACATAATTGGACCAAAGACGAAGAAGAGTATTTAAAAAGGCTAATAGAATATTATAGAGAGGATAATTACATTCCATGGTCAAAAATAGCATCTTCAATGGAGAATAGAACTAAAATCCAAGTTTATAACAAATACTTGAGAATGTCTGAACTTAGAAAAGGTAGATTTCTACCCGAGGAAGATGCTGTCATACTTACATTTGCTGATAAATATGGTACAGATTTCAAAAGAATGACGTGGTTCTTACCCGGTCGATCAGTTACACAGTGCCGTACGCGATATCATGTATTGTCTAAAAAGAAGGTCTCAATACAGTGGACTGCTGAAGAAGATAGAAAGTTAATACAACTTATGTCAAATCAAGATGTTATTAAGAATTATTCAAGCATCACAAAACATTTTCCAGGTAAGGATAGGGTACACATAAGATCTAGACATATGATATTAGAACGTTGGATGATGAGCCATCCCAATTTAGATATTGCAAAAGCCCCAAGACGGGGCCCAAGACTACTAAATCGCGGCAATTTGACTGATAATTTAAATAAGGCCATTGAAAATCTAAAAGCAAGAGTGAAATCCGATATACAAAAGGATAAATCAAGAGTGGTTACAATTAACTCATCAGAGCAAAGCATTGACGACGCGATAATAGACTTTTTTGTAAAACAACAGATAAAAACTAAAGATTCAAATAAACTCAAGACAAATGATAAGGATACTATACAAGAACCGAGTCAAACTGAATATGAAGCAAGAGAGGTGGTTAACGTCGCTAATTTGCAACAAGTTCTAATTTTGCTAAAAGCAAAGTTAAACAAGGAGAAGTTCATGAATAGTAGTACGTTTAATCAGTTTCCACAATTACATTTGCCAGATCTTAATATTTATAAAATCATTAAGAAATCCTATTCAAAAATGAAAAATGGACCAAATTCTGCACACCTAGCAAAGATCCCAGATGTATTTGGTAATAATAGCTTAGGTCGACTAGAATATGTCCTTCCTCCAAATTATGCAACCATTACAGGATGTAGAAAATTAATAAATTATGTTTCTAATCAAAATGATATTTCTAGAAAAAATTTAAGCCACATCATTCATAACAATAGTATATTGAGAGACCAAATGAGTCGAATGATAGAAAGATTTCATACTTTGTTTATGTGGCCTGTGATGTTATCAAATAGGCCCCCGCATCCACTAACAGCAAGAAACGTAAAACCAATAAATTACCAGCCCCCAGAAAGGAAAATTCAGCCACCTCCATATCAGAGAGGAGATTATTTGTCTTTGCCAAAAGTGATTGAAGATGACAATATTATTAGTGATGTAATTGATTTGGACCATAATAATATGAATGATGTTACTCTAGAACAATCATACATTTTTAGACCTTGTGATAGTGATGATGATGATGAATAA
- Protein Sequence
- MTDFDSDLESDLEAELEDLRRLTAALEDDEPGPSRGMSQFSVHTSQSTINSVQDDFINIDTAIALNKLYDEKLQGLEKMLINRLNQCRQKLREVQCTNNDDKIEKPNYNKFKYIHCGKPYFKDEFGFPAPDNEDTLLRAKAGMYDFASIQAVPGWTIKDKNILTKCILKLSREIKRKQLNSQLAKMQRLNVNKTKKSKEHNEIQKIKKKLNRIDKMPLKLVALPIDEEYDWDFVAKKLNHRHRPQEFRALWKLFLHPSINKTPWCEKEDTKLQDIVKEKEYQDWDAIAKELNTGRTAYQCFVYFRTNMGNNFILHNWTKDEEEYLKRLIEYYREDNYIPWSKIASSMENRTKIQVYNKYLRMSELRKGRFLPEEDAVILTFADKYGTDFKRMTWFLPGRSVTQCRTRYHVLSKKKVSIQWTAEEDRKLIQLMSNQDVIKNYSSITKHFPGKDRVHIRSRHMILERWMMSHPNLDIAKAPRRGPRLLNRGNLTDNLNKAIENLKARVKSDIQKDKSRVVTINSSEQSIDDAIIDFFVKQQIKTKDSNKLKTNDKDTIQEPSQTEYEAREVVNVANLQQVLILLKAKLNKEKFMNSSTFNQFPQLHLPDLNIYKIIKKSYSKMKNGPNSAHLAKIPDVFGNNSLGRLEYVLPPNYATITGCRKLINYVSNQNDISRKNLSHIIHNNSILRDQMSRMIERFHTLFMWPVMLSNRPPHPLTARNVKPINYQPPERKIQPPPYQRGDYLSLPKVIEDDNIISDVIDLDHNNMNDVTLEQSYIFRPCDSDDDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357435;
- 90% Identity
- iTF_00357435;
- 80% Identity
- -