Ccro013503.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Colias croceus
Gene Symbol
ct
Assembly
GCA_905220415.1
Location
HG991977.1:1432083-1555821[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9e-27 4.7e-23 81.4 0.0 3 70 365 433 363 439 0.94
2 3 3.2e-32 3.8e-28 97.7 0.0 4 77 765 839 763 841 0.96
3 3 5.8e-31 6.9e-27 93.7 0.0 3 75 961 1034 959 1038 0.95

Sequence Information

Coding Sequence
ATGCACCCCACCGGCGCGGCCAGTCTGCCCGCCGCACCAGAGGCGGAGGTGCAAGCTATGCACTCGATGGACTGGCTCTTTAAGAAGGAAAGGATATATCTCTTAGCACAGTTCTGGCAACAGAGAGCTACCCTGGCGGAGAAGGAGGTAACAACGCTAAAGGAACAATTAGCAACGACCAGTCCTACACCGCTGCAAGCCACAGTACCGCCTAAAACAAATGGCTCACACATAGACACACCAAGGGACCAAGAAACGAGGATAGACAGTTTCAGTCCAGATATAAAAGAAGAGAAAAGAAGAACTCCAGATATTGATGAGGATATAGAACATAAAATAGAAATGGCTGCCACAGCGAGGAGTAATAGCAACTCGTCACGGAGCAGTCCTGTCGTTAATCAGGGAAACAATTTAGAAAGTGAATTAGCTGCTAAGGAAAAAGAGATCGCGCAATTAGTAGAAGACGTGAGACGGTTACAAGCATCGCTGTCAGCGCTTCAGGAGGCGCACGCAAAGCAGTTGCAGCGGCTGGAAGAGAGGCTGGATGAAAAGAAACAGCACATCGCCAGGCTTGAAGCGAGACTGGATACGCAGAGGGACTACGATGATATCAAACGAGAGATCAGCATGCTCCGTTTCTCGGAGCTGGGCCCGAACGAGCGGCCACACACAATACCACCCCCTAAAGACATATTCGGTCATCAAAATCACCTCCTGCGTTCGATGGAGCTAGGCGGCAGCGAGCGCGAGCGCAAGCCGGAGCCGCTCCGCTCGCCCGCCGCCTCGCAGCACGAGCGCAGCTCCGCCGAGCGCGAGCGCAGCACGGAGCGGCGAGAGCCAGGTGCGGAGGAGTGGCCCGCGTCGCCGCCGCCGCTCAACAACAACACGACGCACCACAACCACAACGGCGCGCCGGCGCCCAGCCCGTTCCGCTTCGAGGAGCACCGGCCGTACCGCTTCGCGGAGGACATGGGCCCGCTGCCGCCCGGCGCGCTCGTGGGCCGGCTCGGCGACTCGCTCATCCCCAAGGGCGACCCCATGGAGGCGCGCCTGCAGGAGATGCTGCGCTACAACATGGACAAATACGCCAACTCGAACCTCGACACGCTGCACATCAGCCGGCGCGTGCGCGAGCTGCTGTCCGTGCACAACATCGGCCAGCGGCTCTTCGCCAAGTACGTGCTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTGTCCAAGCCGAAGCCCTGGGACAAGCTCACGGAGAAGGGCCGCGACTCGTACCGCAAGATGCACGCGTGGGCCTGCGACGAGGCCGCCATCATGCTGCTCAAGTCGCTCATTCCCAAGAAAGTGGGCACAAAAGATGGCACAGCAGCGCCAGGTTTCGGAAGATCAGACGGCGAAGGTGACGAACGGCTCGCACATATCCTCACTGAGGCTTCCCACATGATAAAAACACCGACACAGAACACGAATGACGATTCTAGGAGTAATGAAGACTCAAGTTCACCGAGAACGCAGTGTCCCTCCCCATTCTCGAATAAGGATTCAAGTCAAAATAGAAGGCTGAAAAAATATGAAAACGACGACATTCCTCAAGAGAAAGTGGTTCGCATATATCAAGAAGAACTGGCCAAAATCATGACGAGGCGAGTTGATGACATGCGACATAATCGTGAAGGGTTTCCTGGCATGTTCCCTCCATTTTTCAGCGGCGGCATGCCACCACACATGGAGCGGCCACCAGAAGACATCCGCATGGCCATCGAAGCGTACCACAGAGAGCTTGCCAAGATCCAACCCGGCGGGAACATGCCCAACTTGCACAATATACCCGGAATGCCACCCTTCCCCAACCTGATCGCGCTACAACATCAAGCGATGCAAGCGCAGAACCAGCACATGAACGGCTCAGGAGCGGTCCAAGACCTCTCCCTGCCCAAAGACAAAAATGCCAAAATAAACGGTATGACTGATAGCGATAAGGACAGACAGATGGACGCGGAGGAGGCGATCCGGCACGCGGGGAGTGCGTTCTCCTTAGTGAGGCCGAAGTTGGAGCCGGGCCAGCAGTCCACCGGCTCGTCGGCCTCCAGCCCGCTCGGGAACGCCATCCTCCCGCCAGCAATAACGCCCAATGAAGACTTCAATACTTCAGCGGCAGCGAGCCCCTTACAGCGAATGGCGTCAATAACGAATAGCTTAATATCTCAACCTCCAAATCCCCCACACCACACCCCTCCCCAGAGATCGATGAAGGCCGTGCTTCCACCGATCACGCAACAACAGTTTGATCTCTTTAACAATCTGAATACAGAAGATATAGTGAAAAGGGTGAAAGAAGCGTTGAGTCAGTACTCAATAAGTCAGAGGCTATTCGGAGAATCAGTGTTAGGGCTGTCACAAGGCTCCGTCAGTGACCTGCTCGCGAGGCCCAAACCCTGGCACATGTTAACACAGAAAGGAAGGGAACCCTTCATTAGAATGAAGATGTTTCTGGAAGATGATAATGCTGTACATAAATTAGTTGCATCACAGTACAAGATTGCGCCAGAAAAACTGATGAGGACCGGAAACTATAGCGGAGCGCCTCCGTGTCCGCCGAACATGAGCAAGCCGCTGGCGCCGACGCAGAAGATGCTGTCGGAGGCGACGTCGCTGCTCAGCAAGATGCAGCAGGAGCAGCTGCTGGGCGGCGCGCTGCACCTGCCGCCCGCGCTGCTGCTCACGCCGCCCGGCTTCGCGCCGCCGCACCCGCACCTGCCGCACGTGCCGCACGCGCCGCACGCGCCGCACGCGCCGCACCTGCCGCCCGACGGCAAGGAGCGCAAGCCGGCCCGCGCGCTGCCGCCGCACGTGGCGCCCAGCGTGTACGAGATGGCGGCGCTCACGCAGGACCTCGACACGCAGACCATCACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATCGGCCAGAAGATCTTCGGCGAGGCGGTGCTCGGCCTCTCGCAGGGCTCCGTCAGCGAGCTGCTGTCCAAGCCCAAGCCGTGGCACATGCTCAGCATCAAGGGCCGCGAGCCCTTCATCCGCATGCAGCTGTGGCTCAGCGACGCGCACAACATCGACCGCCTGCAGGCGCTCAAGAACGAGCGGCGCGAGGCCAACAAGCGGCGGCGATCCAGCGGGCCCGGCCAGGACAACTCCTCCGACACTTCCTCTAATGATACCTCCGAGTTCTACCACTCGAGCTCGCCGGGCCCCACTACGGGCGCGCCTTCTGCTAAGAAACAACGCGTCCTATTTTCAGAAGAGCAAAAAGAAGCTTTGAGGCTCGCGTTCGCCCTGGACCCGTACCCAAACATGCCGACGATAGAATTCTTAGCCGCCGAGTTGGGCCTGTCGACGCGGACGATAACGAACTGGTTCCACAACCACCGCATGCGGCTGAAGCAGCAGGCGCCGCACGGGCTGCCGGCCGAGCCGCCGGCCCGCGAGCCCGCCGCGCCCTTCGACCCGGTGCAGTTCCGCCTGCTGCTCAACCAGCGCCTGCTCGAGCTGCAGAAGGAGCGCATGGGGCTCGCCGGCGTGCCGCTGCCCTACCCGCCCTACTTCGCCGCCAACTCCAGCTTCGCGGCGCTCATCGGGCGCGGCCTGCTGCCGGCCGACGAGCGCAAGGACGCCGCCGGCGGGCTCGACCTGTCGATGCCGCTCAAGCGCGAGCCCGACGCGGACGACTTCGAGGACGACGACGCGGAGAGCAACCTCGGCTCGGAGGACTCGCTCGACGAGGACAAGAGCGAGCCCAAGGCGACCTCCACGCCGGCGCGGTCCAGCCGCCGCAAGCCCGCCGCGCCGCAGTGGGTCAACCCCGACTGGCAGGACGACAAGCCGCGCAACCCCGACGAGGTCATCATCAACGGCGTGTGCGTCATGCGCAGCGACGACTTCCGGCGCGAGGCCGAGCCCACCGTGCGCGTCGAGCCCTCGCCCGCCGCTGAGCCCGCGCCCGGAGAACCCTCGCCCGCTGCTCTAGCGCCCGACGATATCAAAACCGAGGCGGAGGACCGGTGGGAGTACTAG
Protein Sequence
MHPTGAASLPAAPEAEVQAMHSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLATTSPTPLQATVPPKTNGSHIDTPRDQETRIDSFSPDIKEEKRRTPDIDEDIEHKIEMAATARSNSNSSRSSPVVNQGNNLESELAAKEKEIAQLVEDVRRLQASLSALQEAHAKQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRFSELGPNERPHTIPPPKDIFGHQNHLLRSMELGGSERERKPEPLRSPAASQHERSSAERERSTERREPGAEEWPASPPPLNNNTTHHNHNGAPAPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTAAPGFGRSDGEGDERLAHILTEASHMIKTPTQNTNDDSRSNEDSSSPRTQCPSPFSNKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVDDMRHNREGFPGMFPPFFSGGMPPHMERPPEDIRMAIEAYHRELAKIQPGGNMPNLHNIPGMPPFPNLIALQHQAMQAQNQHMNGSGAVQDLSLPKDKNAKINGMTDSDKDRQMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNEDFNTSAAASPLQRMASITNSLISQPPNPPHHTPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMSKPLAPTQKMLSEATSLLSKMQQEQLLGGALHLPPALLLTPPGFAPPHPHLPHVPHAPHAPHAPHLPPDGKERKPARALPPHVAPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTTGAPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPAREPAAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSSFAALIGRGLLPADERKDAAGGLDLSMPLKREPDADDFEDDDAESNLGSEDSLDEDKSEPKATSTPARSSRRKPAAPQWVNPDWQDDKPRNPDEVIINGVCVMRSDDFRREAEPTVRVEPSPAAEPAPGEPSPAALAPDDIKTEAEDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00887212;
90% Identity
iTF_00358418;
80% Identity
iTF_00358418;