Ccro015819.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- kn
- Assembly
- GCA_905220415.1
- Location
- HG991971.1:4737810-4744846[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-119 9.4e-115 384.5 0.0 209 387 9 205 6 209 0.98 2 2 3e-09 3.6e-05 22.7 1.3 420 469 214 265 206 307 0.84
Sequence Information
- Coding Sequence
- ATGTTCAAGTATTATTTATACCAAGAGGTGGTGATATCAACCCAAGTGATGGTGGACGGGCCCCTCCTGGCGATATCGGACAACATGTTCGTCCACAACAACAGCAAGCACGGCCGCCGCGCCAAGCGCCTCGATCCGACTGAAGGTACAGAGGCTGCCCTCGAACCTACTTCGGGGCTATATCCACCGTTGCCCGTAGCAACGCCGTGCATCAAAGCAATATCACCTAGTGAAGGCTGGACGTCAGGGGGTTCGACGGTCATAATAGTGGGGGATAATTTCTTCGATGGCCTTCAAGTAGTCTTCGGAACTATGCTAGTTTGGAGTGAGTTAATAACGTCACACGCAATAAGAGTTCAAACGCCTCCGAGACACATACCGGGCGTCGTGGAAGTTACATTGTCGTACAAGAGTAAACAGTTCTGTAAAGGAGCGCCCGGAAGATTTGTTTATGTTTCAGCTCTCAACGAGCCTACGATAGATTACGGATTTCAGCGGCTTCAGAAACTTATACCGAGACATCCGGGCGATCCCGAGAAACTGCCTAAGGAAATAATACTAAAGCGAGCGGCGGATTTAGCAGAAGCGTTATACTCAATGCCTCGCAACAACCAGTTGGGTTTGGGAGCTCCTCGCTCACCGCCCGCCAGTATGCCCTTCAACTCGTACACAGGACAGCTTGCTGTTAGTGTACAGGACACTGCCACTTCGCAGTGGACGGAAGAAGACTACGCCCGTAGCGGCGGCTCGGTGTCGCCGCGCTACTGCTCGGCCGCCAGCACGCCGCACGCCTCCTACCCGCACCCGCAGCACTACCCCGCGCCGCCCACCTCGCTCTTCAACACCACCACCAGAATGAGTGGTCTAGTATCATCTCCATTCAGTGTGAATCCATTCTCTCTTCCAACGTGCAGCGCGCAACAATACGCACAAACAGCGCCTCTTGCTTCGAAGTAA
- Protein Sequence
- MFKYYLYQEVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTEAALEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTATSQWTEEDYARSGGSVSPRYCSAASTPHASYPHPQHYPAPPTSLFNTTTRMSGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01451205; iTF_00457033; iTF_00659254;
- 90% Identity
- iTF_01451205; iTF_01205490; iTF_00659254;
- 80% Identity
- -