Ccro022105.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- Arid5b
- Assembly
- GCA_905220415.1
- Location
- HG991981.1:1960111-2023362[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-10 4.9e-07 30.5 0.1 2 89 333 405 332 405 0.87
Sequence Information
- Coding Sequence
- ATGGAGAAACCATCGTACAAGCTGGTAGGAGCGCCATGCGGTCAACATGGTCAATACACATTTTACAAAGCGCTGAGATTGACTGGACCTCTGGAAAGGATCATAGCCATAGGGGACTTCTTCTTCGTCAGAGTGTGGCAGGATTCTGAGCTGGTGTCCATTGGGGAACTGCAGCTGCTCTGGACGGACCGCGTCTCCGACCAGACCCTGGTCTCCCTGCGCCTTTACTTCCTTCCTGAGAACACGCCTGATGGCAGGGGACAGCATGGCCAGGACGAAGTACTCGCAATCAACGACAAAGTGGTCCTGCGTGCTGAGGACCTCCTCTCCTGGGTGTGCTCCGGTACGGGCTGGCGCTGGGGGCTCCGCGCAGTATGGCGGGGCGCGTGCGCTCCGCCCAGTGAGCCGAAGCATACTGCGCCATTGCATCATACGAGACTGGACTTTAGTGATGTTGAGAGAGAGAAGAGTGCTATGTCACTAGACACCGACAGTCCAGGCGTCGTAGTATTCTCCTACCCCCGCTACTGCAGATACCGTGCACTAGCGGCCAGACTGGACGGCATCCAATCCGCCTGGCTGCGGGACTCGCTGGTGGCCGCGCTCGGCGGGTACGCGGCACCCACCAGTAATACCCGGATACTGTACTGCAAGGACACCTTCGAGTACCCAGAACTGGAAGGCCACGAGTTCGTATGCAACCATCTCGCGCCGAAACTAAAAGGACGACCACGTGGTCGGCGGCGGGCACGGGCGCGGTCGCGTGACCGTGACCACGACCCTGACCGTGACCGTGACTCGCGGTCGAGTGACAGTGACGTCACGCCGACGGAGCCGAGGACACCACGCCGAGTATCCCTCCGAAACGGCGGCGACAAACAGAGTGAAGAAGAAGACGAAACAGAGAGCAGAGTGGCGGAGAGAGAAGATAGAGATAGAGAGGAGAGAGAAGAGAAGAGACCGGATAGAGACGAGAAGAGACAGGAGAGCGTGAAGGATGAAGAGTTCCTACAGCAGTTGAGAGAGTTTTATAAAGACAGGAGTTATATGAAGATTGCGCATACGAAAAATATATCCCTCCGCAAATTATACGGACGGGTTAGATCTTGTGGCGGCTACGAAGCGGCGTGCAGAGGGCGGGTTTGGAAGTTACTGTATGGAGGTCTAGCGCCGAGGGCTAGGAGGCTATATGAGAGATTCCTGCTTCTCTTCGAGAACCATCAACGACGGGAAAACCCAAAACTCTTCCCCAAATTAAACGGCAAAATAGACGAACCAAAAACCATAGACACGATAGACGTCACCGACTCGCCTCTACGCGACATAGACAACAAAACCGACTTGCCAGAAAAGAGGTTACGCACTCCAAGCCCGAAAGCCGACGAAAAACTCATTTTGGACAATGAAACTGGGGAATTACTAAAAGAGGACATGAATATTACCTCAAAACCCGCGGAGGAGTTAAATAGGGAGTTTCTAGAGTCGCTAACAAAGGAGAAGGAAGAGGAAAAGGGGGAAGATGAGGGAAAGAGGGGAGAGGAGGGAAAGAGGGGAGAGGAGGGAAAAGGGGAGGTGAAGATATCGGTGAAGCCGGTGGAAAAGTTGATAGATGTGGGGGTTGAAGATAGGAAAGATGGCAAAGAGTTTCTAAATGAACTCGCGCAGAAGTTGCATTTAGGTAATTCAGACACGACAATACTAAAGGAGCTATCAGACGCGCAGAGTAGCATTGCTTCGAACGCATTAACTAGCCTATCGACTTTAAGTGAGAAATACGCAGTAAACGGCCATAATTCAGTCACAGCAGTTAATTTAGATCAGCACAAAGCACGTCCGGCCGGCCGCAGCTCGCTGCGAGCTGTGCGCGTCAAACCGACCCGACCGCACCAACCGAACAACACACCCCCACAACCAGCAGTTCGCGTAGAAGCGTCCCCACCACCACCGGCCCCAGTCACCAACTTTGGTATTCACCACCCCGCACCACCACCCCCACATAGTGATGATGAAATCGTTGAGGTACCATACAAACCAAAAACACCAGAAATCATAGACTTAGACGAGTACCCGGAGAGTCCACAGAGCGTCAAGAAGAAAAAGCTGGAAATCCTCAAAGAACGGGGTTTAGAAGTTACTGCCGTACCACCGACCCCTATTTGGCCGACACCCCTAGCAACACCTTTGACCCCCATAACCCCGTTAATAAACCCCGCGCCTATTATTCTTAACCCCGCAGTACAACATCAAATAATGACGCAAGCGCAACTATTCCAAATGTATAATATTATCCCACCAAATTACGGTAATGGCCTTCAACCCCCAAAAGTTATTCAAGCCACCAGCGCCTTTGGAACATGTGGGCCAGAGAAAACAGTTTACGGCAACCCCAAAGACCCCTTCATGCCGCCCCCACACGTGCTCCAAGGAACCCCCATCAAACCCCAAAGGGCCATACAACCCTCTGTACCGACCCCTCAAGATATCCTCGACCTAACTTGCAAATCCCAATCTCCGCCCCCACAAAAACCAGCTGTGGAAATAGTTAGAATACCACAATCTGTGACTCCCACGCCGCAAAATTTGACCAAAAACTACACGCTTCTAGATGGTAAAGCGGTGGTCGGTTCCAACTTGGAAATAACGCTCGTCAACCCGAAAACACCTACGCAAAAACGGCCGCCGCAAAAACGGTCCTCGAACGGCAAATTCACATCAGCAAAAACGCCAACACCACCGAAAGATTACCCCAAACCGTTCCCATCTCCATCTGGGGTCAAAAAGGCCCCCATAGTGGTCCCCAACTACCAAATATCGCGCGATGACGTATCCCCAACCAGTTCAACGGGGTCAAAGGACTCGCAAAACGCGATGCCAAACAATTTGCTTACAAATGTGTTCAAAGGTCAGAATTTGACCCAAATGATGGATATGCAAAAGGGCCCCGTCAACCCCTTCATGGACCCGATGTATATGAACGCGTTCTACAGTAGTTTGGGCCAAATGGACCAGAGACAATTGGCCCTGTATAGGGACTTTATGGCCAATCAGTTTAGGGGTTACTCGGGCCTTTTGAACATTGGAACGCCGACAACGAAAAATTAG
- Protein Sequence
- MEKPSYKLVGAPCGQHGQYTFYKALRLTGPLERIIAIGDFFFVRVWQDSELVSIGELQLLWTDRVSDQTLVSLRLYFLPENTPDGRGQHGQDEVLAINDKVVLRAEDLLSWVCSGTGWRWGLRAVWRGACAPPSEPKHTAPLHHTRLDFSDVEREKSAMSLDTDSPGVVVFSYPRYCRYRALAARLDGIQSAWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRARARSRDRDHDPDRDRDSRSSDSDVTPTEPRTPRRVSLRNGGDKQSEEEDETESRVAEREDRDREEREEKRPDRDEKRQESVKDEEFLQQLREFYKDRSYMKIAHTKNISLRKLYGRVRSCGGYEAACRGRVWKLLYGGLAPRARRLYERFLLLFENHQRRENPKLFPKLNGKIDEPKTIDTIDVTDSPLRDIDNKTDLPEKRLRTPSPKADEKLILDNETGELLKEDMNITSKPAEELNREFLESLTKEKEEEKGEDEGKRGEEGKRGEEGKGEVKISVKPVEKLIDVGVEDRKDGKEFLNELAQKLHLGNSDTTILKELSDAQSSIASNALTSLSTLSEKYAVNGHNSVTAVNLDQHKARPAGRSSLRAVRVKPTRPHQPNNTPPQPAVRVEASPPPPAPVTNFGIHHPAPPPPHSDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLEILKERGLEVTAVPPTPIWPTPLATPLTPITPLINPAPIILNPAVQHQIMTQAQLFQMYNIIPPNYGNGLQPPKVIQATSAFGTCGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRAIQPSVPTPQDILDLTCKSQSPPPQKPAVEIVRIPQSVTPTPQNLTKNYTLLDGKAVVGSNLEITLVNPKTPTQKRPPQKRSSNGKFTSAKTPTPPKDYPKPFPSPSGVKKAPIVVPNYQISRDDVSPTSSTGSKDSQNAMPNNLLTNVFKGQNLTQMMDMQKGPVNPFMDPMYMNAFYSSLGQMDQRQLALYRDFMANQFRGYSGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357206;
- 90% Identity
- iTF_00357206;
- 80% Identity
- -