Ccro017546.1
Basic Information
- Insect
- Colias croceus
- Gene Symbol
- JMJ15_1
- Assembly
- GCA_905220415.1
- Location
- HG991958.1:6676509-6692596[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-16 7.2e-13 49.1 0.1 17 89 600 668 586 668 0.86
Sequence Information
- Coding Sequence
- ATGGAGAAAGTCCAAGCACAACGCAAATTCGCCGCGGGCATACATGTTCCGGTTACGCGTCAAACGCAACAAGCCGCTGTGGACAGGAGAACAGCAACACCTCCCGAGTCAAGAGTCTTCCAAATACATACTACACCGAGCTCGATGTTGGATGTGGTCGCTTTCCAAGGTATACACACTCACAAGCAACCAGTTGTACTATTAAAAAGGTTAGAAGATACAATGCAGCCAAGTTGCAGCAAGAGCAGCGAAAATGGCGAATCTGAACCGCCCAATCGGTACCCAATACGTTCGAAGAGCAGAAAATCTGTACGGAGGGATCGTAGCAGTGATACAGGTTGTAGTAAAAAGAGAAAAATATCCAAGAAGAAGTCATCAAATAGTAATGCATTCATGGAAATAGAACAGTCCGTACCCATAACACCTGTTTCTGGAGCTTCTGCCGATCATATGATAGATGAGGAGGTAGAAAATGTTAATGGATATGGAAGCATGACGCCTCTTCCTAATACTACTGGCTGTAGAGCAGATAAGGAAGATTCTGGAATTGTGAACCAAGTTCCTTTTGGTGCTTTAACAGATTTACAATTTGAAAATTCTGATGAAGCCATCGCGAATTTAAATGTTAAAACTAAAAATGAGAGGACAGAAGACGAGCTAACATCACAGCAGCATAACTTGTGCAAAGGCTCTAGGAGGAACACCGGCAGTTGGCAGGTGACGAATTACGAAACCGTGAACCGTGTATATGTGTTTAAGCATTGCAATGTGACAAACGAGGATGACGGCGTTAGCATGAATGAATATGAAGAATTTTCAGACAATTCAGTTATTATTGATGATAGTGATGGACAGGACGCAGTTACGAGTAGCTCCATAACTTATACACCGGCACCGAACAACAATTGTGCACAAAATATAGACGATGCAACTCCATCTATTCAAAATCAAGCAAGTACACGTAGCAACACGAAAAAAACAAGAAACGAGTCATGCCCCTCGAGGCACATTACTTCTTTAAAGGAAATTGTTTGCTGTAGTAATACTGTTCTAAATAAAAAATGTAACGCGTGTAAATTCTGTTCAAAAATAAAACTCGTATCGACACTTGTGAAATCACTGGAGTCGTCGAGTTTCAACTTATTACTATCGGATCATATTAATGTTGAAAATCTTCCCACTGATCTCACTGATACTACCAATCCTTCAATATCAGTTTCATCAACTGGAGATTTAAATAATTCAAATAATACGTGGAATTGTAAACTTGAAGTACCGTTCCCGGAGACCATGGATGATGATTGTGATGTAACTGAGACCGTGCAAAATGGCCAATTGTCCGGCACACAACAGCAAGAGACACGCAATCCCAACGCGAGTCCGTCCACTGATGAGACGTCGGAAAATCGGCGGTCTGTTTTCATTCCATCCTCAGCAGTTCCTGGACCATCTACTAGTACACCTACCCAGACACCTCCTAATTCCGAAATTTCCAGCGACGATGAAGTATTGTCTAAAATGAGGAATATTGAACGACCAAAAATGCAAAATGCTCCCGTTTTCGAACCGACCGCAGAGGAATTTAAGGATCCTATGGTATACTTCGAGTCAATACTGCCAAAGGTGGCAGAGTTTGGGTTGTGCAAAGTGATTCCACCGAGAACGTTCGTCCCACCTTGTAACTTGGATAACGAAATTCGATTTGGGGTAACAAATCAGTATATAGGGCGTATGTTCAAACGCTGGGGTTCGGCCTCTAAAGAACTTTCCAATATTCGGGCCAATTTGCTTGCGCACAAAATCTACCCCAGACCACCATTGCTTGATGGCCTTGAGGTAAACTTACCAAAACTATTTCGAGTTGTGCAAGGCTTGGGTGGATTGAAGAACGTATTCACTAAGAAGAAATGGAATAAGGTTGCTGAGGAGATGAGATACAAAAATCTGATAAATCCGAAAAAGCGTCTTGACCAAATATATGTAAAATTCCTGTTGCCATACGACACGTTGACCAATCAGGAGCGTAATAAGCTGACTAATCACGTTAATCGTTTATGGAAAAAGCGTTCCGATAATATGTTAGACCGAGCTACGAACCCATTGCATAGACAGAAACGCATGTTGGCGGAGTCTGATTCGTCCTCCGACGAAGAGTATGGGCCAGATGATGTGAAAATATTGGAGTCATTGAGTGAAACCGAAGACTGTATTATCGCGGGAAAGAAAATGAATTTGAAGTTTTTTAAAAAGATCGCCAATAGCGCTGTGGACATAAACGTGCCCTCGGGCGTTTGCAACGAGGAGAATGTCGAGAAGATATATTGGAAGCATGTCGAGACTGGCGAGGACCATGTGTGCGTGTACGCCGCCTCCATAGACACGGACGAGGCTGACTTGGGTTTCCCGAACGATTGTGAACAACCGTACTCGCAACACCCGTGGAATCTGAAGGTTCATACCTATCCGGAGAGGAGGATCGGTCGCGGTGGCACCGGGCCAGCCCGTTCACCCGACTTGAACCCCGTTGATTTTGACATTAAGGATATTGTGTACGCACGGGAGAGCACATCGGAGCAAGAATTGGAGGAAAATTCAAGTGGCTATAACAGCCATTAA
- Protein Sequence
- MEKVQAQRKFAAGIHVPVTRQTQQAAVDRRTATPPESRVFQIHTTPSSMLDVVAFQGIHTHKQPVVLLKRLEDTMQPSCSKSSENGESEPPNRYPIRSKSRKSVRRDRSSDTGCSKKRKISKKKSSNSNAFMEIEQSVPITPVSGASADHMIDEEVENVNGYGSMTPLPNTTGCRADKEDSGIVNQVPFGALTDLQFENSDEAIANLNVKTKNERTEDELTSQQHNLCKGSRRNTGSWQVTNYETVNRVYVFKHCNVTNEDDGVSMNEYEEFSDNSVIIDDSDGQDAVTSSSITYTPAPNNNCAQNIDDATPSIQNQASTRSNTKKTRNESCPSRHITSLKEIVCCSNTVLNKKCNACKFCSKIKLVSTLVKSLESSSFNLLLSDHINVENLPTDLTDTTNPSISVSSTGDLNNSNNTWNCKLEVPFPETMDDDCDVTETVQNGQLSGTQQQETRNPNASPSTDETSENRRSVFIPSSAVPGPSTSTPTQTPPNSEISSDDEVLSKMRNIERPKMQNAPVFEPTAEEFKDPMVYFESILPKVAEFGLCKVIPPRTFVPPCNLDNEIRFGVTNQYIGRMFKRWGSASKELSNIRANLLAHKIYPRPPLLDGLEVNLPKLFRVVQGLGGLKNVFTKKKWNKVAEEMRYKNLINPKKRLDQIYVKFLLPYDTLTNQERNKLTNHVNRLWKKRSDNMLDRATNPLHRQKRMLAESDSSSDEEYGPDDVKILESLSETEDCIIAGKKMNLKFFKKIANSAVDINVPSGVCNEENVEKIYWKHVETGEDHVCVYAASIDTDEADLGFPNDCEQPYSQHPWNLKVHTYPERRIGRGGTGPARSPDLNPVDFDIKDIVYARESTSEQELEENSSGYNSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -