Cbeh029421.1
Basic Information
- Insect
- Colias behrii
- Gene Symbol
- -
- Assembly
- GCA_029959075.1
- Location
- JARWMB010000031.1:278655-279866[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00014 0.11 13.5 0.3 13 43 59 86 54 87 0.92 2 9 0.00021 0.17 12.9 3.6 2 29 107 134 106 146 0.83 3 9 0.086 69 4.5 3.9 5 43 139 174 137 175 0.87 4 9 0.022 18 6.4 3.6 6 43 169 203 165 204 0.82 5 9 1 8.1e+02 1.1 5.1 18 43 238 260 236 261 0.78 6 9 0.0039 3.1 8.8 0.4 18 44 287 310 282 310 0.92 7 9 1.4 1.1e+03 0.7 0.1 19 28 318 327 312 331 0.87 8 9 0.021 17 6.5 1.6 3 30 333 360 329 372 0.70 9 9 0.0036 2.9 8.9 5.1 14 43 370 396 357 397 0.85
Sequence Information
- Coding Sequence
- ATGGAGAATGAAACAGAGGAAATAACAGTGAAGCCTGAATTTGTGCAAATAGAGGTAAAAGAAGAACCGTTTAGCGTAGAAGCGAATATAGACACGCAAAACATAAAAGACGCTGACGAAAGTGATTCCGAAGAGCCAGAGGATGATTCTGCTGATAAAGTGAACTCAGAGGGTAAGAGAAATAGAGTGCCATGTCCAAAATGCGATCGAACGTTGAAAAACCAAGCGAACTTGAAGCAACATCTACGAACTGTACACTTGGAAGGAGCAGAGACTGCCGAGTGTTCGCAATGCTTTCGTGTGTTCAAATCAAGAGGGAACCTCTGGAATCACATTCACGCAGTGCACAGGAACGATAAGGAAGTGAATTGCAAGGAATGCGGTAAGGTATTTCTAAACAAACGTCGGCTAGACAACCATGTATATTATACGCATCGCGACGTCACTCCAATAGCTTGTCCACATTGTGATAAAGTATGTAACGGACAGCGGAAACTCAAAGTACACATACGTAACATGCATACAATACAGGACAACATTCAATGCCCGCACTGTGACAAAATATTTAGAATCGAGTCGCTTCTGAAGAAACATATCACCTACGCGCACGCGACAGACGATATAGAGTACAAATGCCCTTGCGATTTGATATTTATGTCATACAAACAATACAAGAATCACATGAACAACGTGCACCCAGTCAGACAACCGCGTTGCCTCATCTGCCATAAGTCATACAAAACTCCGGCTATCGCGAAGGAACACCTCCGAGTGTGCCACAACATACCTGAAGACGATTTGAACAACCACATAACCTACAACGATTTACCCGAACTGATAAACGAGCCTGAATGTAGTACATGCGCAATTTGCTTCAAAACATTCTCCAATAAAGTCTTGTTTCTACGTCACATGCGAACGACGCATCCTCCAAAGGAAGCGGAGCAAGCGTGTGATGTCTGTGAAAAGACGTTCAAATCGGCGATCCATGTAAAGGTACATAAGTATGCAGTACATTATACTAAGGGGAAACAGACATGTGATCTCTGCGGTCGAGAGTTCGCGTCCAAACGGTATTTATCACAACACAAATTGACGCACGTTGTACATAACTTGGCGCAATGTAATATTTGTGAGGGGATTTATAAATCTAAAGCACATTTGAGGATACATATTAGACGAGTGCATGAAGAGACTATTATTGGTGTTTGA
- Protein Sequence
- MENETEEITVKPEFVQIEVKEEPFSVEANIDTQNIKDADESDSEEPEDDSADKVNSEGKRNRVPCPKCDRTLKNQANLKQHLRTVHLEGAETAECSQCFRVFKSRGNLWNHIHAVHRNDKEVNCKECGKVFLNKRRLDNHVYYTHRDVTPIACPHCDKVCNGQRKLKVHIRNMHTIQDNIQCPHCDKIFRIESLLKKHITYAHATDDIEYKCPCDLIFMSYKQYKNHMNNVHPVRQPRCLICHKSYKTPAIAKEHLRVCHNIPEDDLNNHITYNDLPELINEPECSTCAICFKTFSNKVLFLRHMRTTHPPKEAEQACDVCEKTFKSAIHVKVHKYAVHYTKGKQTCDLCGREFASKRYLSQHKLTHVVHNLAQCNICEGIYKSKAHLRIHIRRVHEETIIGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357904;
- 90% Identity
- iTF_00358865;
- 80% Identity
- iTF_00357887;