Cbeh007849.1
Basic Information
- Insect
- Colias behrii
- Gene Symbol
- clz9
- Assembly
- GCA_029959075.1
- Location
- JARWMB010000006.1:12259066-12261893[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-07 9.3e-05 23.0 0.0 1 35 8 42 8 49 0.85 2 2 5.3 1.7e+03 -0.3 0.0 27 43 796 813 796 814 0.85
Sequence Information
- Coding Sequence
- ATGGcaccgaaaaaaaattataccccAGAACAAATGGGGCGGGCAATAGAAGCGGTAAGGAAAGGCGAAAAGATAGCTGTAGCTGCAAAACAATATGGTGTACCCCGAATTACGCTTCATGACAAAATTACAGGGAAAACCACATTTGGTTGTTCCATGGGACCAACAACTATCCTATCAAAACTGCAAGAAGATATTTTAGAAAGGTGGATATTAGCGATGGCTGATAAGCACTGTCCCGTAACAAGAGAATGCTTATTAGACAGTGTGCAGAAAATCATCACTGACCTAAACATACCCAATCCATTCACCAACAATAGACCGGGAAAAAAATGGTTTTCTTCTTTCTTAAAGAGACGCCCAGATCTAACAGAAAAAGTTGCCGAAAATTTGTCAAAGGCTCGTGATAATGTATCGGAAGAAAACATCAAAATGTGGTTCGCAGAAATAAAGACTTACCTTGAAGACAATGATCTGATAGACATTGTTCATGACCCAAATAGATGTTTTAACGCAGACGAAACTGCTTTTTTTTTGTCACCGAAGAAAGGCCGAGTACTTGCTAAAAAAGGTGAGAAGCATCTGTACAGCTCGAGTGGCGATGACAAAGAAAATCTCACGGTTTTGTTTACCGGTAATGCTGCCGGGTTACTAGCCCCACCGATGATAGTTTTCGCCTATGAGAGAATTCCCAGATACATCTCTGACTCTGTTGATGAAACTTGGGGTATTGGCAAATCGGAAACAGGCTGGATGTGTAGTAACACGTTTTACGAATATATGACGAATATATTTAACCCCTGGCTagaagaaaaaggaataaaaaagCCTATTTTATTCTTCATAGATGGTCACAGATCTCATCTGACTCTTCATTTATCTAATTATTGCTCAGATAACGGGATAGAACTTATTGCCCTATATCCGAATTCAACACATATTTTACAACCCATGGATCTCGCTGTTTTCAGACCGCTAAAACAGTTTTGGAAAAATGCCGTTTACGAATGGAAGATGGAAAATTTAGGACAGAACATCAGAAAAGAGAACTTCGCGCCAGTTTTAAAAAGAGCTATTGCAAAATTGACGCCTGATTGTCTCAAAAATGGATTTAGAGCTGGAGGAATATGCCCCTTTGGACCAGAATATATAGATATGTCCAAAATCAAACATAGAGAGAAAGTTTCGGACTATTCAGGTAAACCGGCATCAACAGAGTTTTTGAAGTGCTTAGAAAAAGAGATTGTCAAAGTGTTTACCGCGGAAAAACTgagtttattcaataaattttactaCGAAGACAGAAAAACGGTCGAGAATAATCTACCAGAAGAAGACACAGCCTTGTACATCATATGGTCTAAAAATAAGCATGACTGCGAAAATGATTTTGAAGCTAATTCAGTGACACCTGCGATTGAGCTAATTAACGATAGCGACCTCAAAACTACTCTAAATTCTGAAACTACATCGGCACCCACAACTTGCGCACCACCACAACTGTCAATTGGTAAGCCTATCAACGCAACAATGCCAATAAATGACCCTACTAGTGGTTCATATGTCAATGTAGAAAACTCCAGAATATCTCAAAGTGTTTCAGAAGGTACGTCACATCCCACAATCGATGAACCACCATCTTCTGAGTCTGCTAATGTTATGCCTATTGTTGTCGAAAACTCCAGCACTTCTCATAATAATTCTAAATCACCATTGGCTTCAAACACACTTGCTGAAACCACAGCAGCTCCCTTGATGACGACACTGCCAAAAAGTGACCCTACTAGAGATTCATCTGTTGATGTTGAAAACGGCGGACCATCTCAAAATATTTCACAAATTAAATCACGTCCCACAATCGGTGAACCACCAAGGCAAATAACTTCTGAAACTGATGATACCTTGGGAGTCAAAGTTCCAACACCTTtcaaaaagtttttgttttggcCAGAAGGTGAAAACAGAACGAAAAAAAGAATTAAGAGGGAAAAAATTCCATCAGCAGTTACAAGCAAAGCATGGCGAGAGTATCACGAACATAaagaaaaacagaaaaaaaaggaACAGGAAGAAAAAGAAGAGAAGGCTAAAAGAAAACAggaaaataaaatgttgaaaGAGAAGGCTGCtgaagaaaaaagaaaaaaacgtAATTTGAAACAGAAAAGAAAAACTCAAGTTAAATCGTCCTCTGATGAGTCAAATTTCGAAATCGAATACGCTGAAAGTGGTGACAGCTATGTAGAAGATGAAGATGGTGAGTCTGAAGCAGACTATCAAAGATTAACTAGTCAATACGATCAAAAATCGAATGGACATCTGTCTAAAGGACTATCAAAACGAAGAAGAACACGATCACGTGAATGTGATACTGATTCAGACATGGATGTTCCATTGAATACATTATCTTCAAAGAAAATTCGAAGAATtggacaaaaaaaatatattagtaaAGGGTGTTACGTTATAGTTATGTACGAAAATGAATATTTTCCTGGCAAAGTAGAAGATGAAAACAAAAATCAGTATGAAGTGAGCACAATGGTTTTATCAACAGGGAATACTTTTAGATGGCCGGAAAAAACAGATAAAATTTGGTATAACATAAATCaagtaattgaaaaaataaatgagCCTATTTGCCTTAATAAAAGAGGGTTTTACAAGATACCGGAAATGGAAAAGTATTTGCCCGACATATACAACTAA
- Protein Sequence
- MAPKKNYTPEQMGRAIEAVRKGEKIAVAAKQYGVPRITLHDKITGKTTFGCSMGPTTILSKLQEDILERWILAMADKHCPVTRECLLDSVQKIITDLNIPNPFTNNRPGKKWFSSFLKRRPDLTEKVAENLSKARDNVSEENIKMWFAEIKTYLEDNDLIDIVHDPNRCFNADETAFFLSPKKGRVLAKKGEKHLYSSSGDDKENLTVLFTGNAAGLLAPPMIVFAYERIPRYISDSVDETWGIGKSETGWMCSNTFYEYMTNIFNPWLEEKGIKKPILFFIDGHRSHLTLHLSNYCSDNGIELIALYPNSTHILQPMDLAVFRPLKQFWKNAVYEWKMENLGQNIRKENFAPVLKRAIAKLTPDCLKNGFRAGGICPFGPEYIDMSKIKHREKVSDYSGKPASTEFLKCLEKEIVKVFTAEKLSLFNKFYYEDRKTVENNLPEEDTALYIIWSKNKHDCENDFEANSVTPAIELINDSDLKTTLNSETTSAPTTCAPPQLSIGKPINATMPINDPTSGSYVNVENSRISQSVSEGTSHPTIDEPPSSESANVMPIVVENSSTSHNNSKSPLASNTLAETTAAPLMTTLPKSDPTRDSSVDVENGGPSQNISQIKSRPTIGEPPRQITSETDDTLGVKVPTPFKKFLFWPEGENRTKKRIKREKIPSAVTSKAWREYHEHKEKQKKKEQEEKEEKAKRKQENKMLKEKAAEEKRKKRNLKQKRKTQVKSSSDESNFEIEYAESGDSYVEDEDGESEADYQRLTSQYDQKSNGHLSKGLSKRRRTRSRECDTDSDMDVPLNTLSSKKIRRIGQKKYISKGCYVIVMYENEYFPGKVEDENKNQYEVSTMVLSTGNTFRWPEKTDKIWYNINQVIEKINEPICLNKRGFYKIPEMEKYLPDIYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00358489;
- 90% Identity
- iTF_00358489;
- 80% Identity
- -