Basic Information

Insect: Colias behrii
Gene Symbol: Plc21C
Assembly: GCA_029959075.1
Location: JARWMB010000008.1:2800735-2811157[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.2e-09 1.3e-06 28.9 0.0 1 41 98 138 98 140 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.2e-09	1.3e-06	28.9	0.0	1	41	98	138	98	140	0.92

Sequence Information

Coding Sequence: ATGACTACATCTACAAGATCATCTGGTGTAACTTTGAAGCCGATAGAAGTGCCTAAACCTTTACAAGAAGGGGAGAAATTCATCAAGTGGGATGAGGATTCAGGCACTGGTCTTCCAGTCACCCTGCGGGTGGATCCCAATGGCTTCTTCCTGTATTGGACTGATCAGAACATGGAGGTGGAAATGCTGGACATTGCCACCATAAGGGATGTCAGAACGGGACAATATGCTAAACTGCCTAAGatggcATCGAAGGAGTCTAACAAATCTAGAAAAAAAACTGCAGCGTATACTGAAGAATCCTTAATAAAGGCTTTAACGGCAATTCGGGAAAATAAGGCGTCGGTAAGACAAGTCTGTAGAGATTATGGGATTCCTAAATCTACGGTCCTCGATAGAATACACGGCAAAACATCTGATATTTTAAAGAAACGTGGGCCAGATCCCGTATTAGGGACTGGTGGTGAAGAGAAAATAGTTAATTGGCTGATTAACATATCAAAATGCGGATTTCCTGTTAAAAAACAGGAACTTTTAGATTCTGTCCAAAAAATTTTACGAGATTCGTCGATTCCTAATAAATTTGAAGACTGTAGACCTGGCCAAACATGGTATCTTAACTTTTTGAAAAGAAACCCACAAATTTCGTGCCGATCCGCCGAAAGTATTAATAAGGCAAGAGCTCAAGTAAGCGAAGAGTCCATTCGAAATTGGTTCTGTGGTCTCGAGACGTATTTGGAAGAGATAAATCAAAAAGACATTCTTAACCGTCCTTCGAGCATATTTAACGGCGACGAAAGTGGCTTTGCGCTGTGTCCGAAGACTGGCAAAGTACTCGGGCCCAGGGGTTACCGTAGCTTATATCAGGTTAAACAAGGGAACGAAAAAGACAACTTAACCGTACTTGTAACCTTCAATGCTAATGGAGATGTATGTCCACCATGCGTGGTATTTCCGTATATAAAACCACCACAGGCAGTGGTGAATAGCATGCCACCTGAATGGTGTTTGGGCAGGTCCGAGTCAGGATGGATGCGGGGAGACGTATTTTTTGAATACATCACCAACGATTTCAATAACTGGCTTGAACgtaataatatcataaaaccGGTCCTCTTGCTGGTTGACGGACACAAATCACATATGTCTCTGATGTTAAGCACAATATGTGaacagttaaatataatattatatgcccTACCGCCCAACACGACGCATATCCTCCAGCCTGCTGACGTAAGTGTATTTGCGCCACTCAAAGCGAGCTGGAAGAAAACAGTCAGAAATTTTTTAATGAAGccagaaaatattaataaaaccgTGACTAAAACAAACTTCTGCACATTGTTTGAAGAAACCTTGCAAGACACTAATCTTGCAACCTGTATCCAAAACGGGTTTAAAAGATGTGGGCTCTACCCCTTTGACCCTAATGCGCCTGATTACACTAAATGTGTAATCGATACAATGCAAAATATAAACACAAGACAATCTACTCCCGGAACAGGCATAAGTAGAGCAGACGTAGCTACTACCAAAAAAGTACTTAAGCAATTAAAAACTGCGCTGCTTAACAAGAAAGTAAACTACAGAGTACTAATAAAAGAACTTAACCTGTTTAAAAAAACACTGCCTTTGGAGACTAATGTTTGTGAATTATCATTAGACACTGAATCCGACTACAACAGTACCGTAAACGGTTCTCGTGATAGTTCACAGGTGTTATCAAACTCGACCAGTTTTACTGTAACAGATTTACTGAAAGAATCTGAGGACACACAGCTCATACAGCCACCACGCGATATAGAACTGGGTACTGATAAGGTTGAAACCATCCAACCACCATTGAACGTAACTGAAGACTGTAACTCCATATCGTTATTAAATATAACAGGAAGTTATCTAGAAGTTGGTTCAGTGCTAAGCCTTGATGACATTTTAGTACTGCCTTTGAATGTCACAGATGAGGTGCCAGCGCCTGGGACGTTGGATGTATGTGAACAGTTATCTTGGATAAAAAAACCTGACGATCAGCCTAGCTCAGCCGTTTCTACGCGTTCAATCCCATCAGCTGTAACTAAAAACCTCACTGGGGCGTCTGCCCCGACGGAAGGCCTGATTTCATCTGGTGTTGTACCCTCATCTGCTGATACTATCGAAAAAGAAGAGGTATCTTCTATTACATTGATTGCACCTGAAACATCTACTCATGCGAAAACAGCAGAACATCCTGTAGATCAACCTAATCCAATCCCTATGGAAGAGGAGACTCTATCTAAGATTGTATCTCCAACTCAAGAGGATCAAATAGTTATCCAAAAACAGCTTGAAACATCATCAGTCAACGTGCCTGAGAAAATCCCAAAGCCAAAAATAGTTGAATGTCCAACATCAATATCGATTACCTCTATTAACATGAGTGACACACATAAAGAGGCTGAGCCCATAGTAATGAATCCTTTCGAGCGCCATTTGTATTTACCATCCCAGCTTGTAAAACCAAAGAAGAATAAAATTCCCGCCGCCATTTCTTCTGCAGCGTGGAGGGAGCATTATGAAATGCGAGAGCGATTAAAGAATCTTAAACAAGAAGAAACTAGAAAGCGAAAATTAGAACGCATCGAAAAACAACAACGAGCAAAAATATTAAAGGAAAATAAGTCCAAGAAAAAGCCAGTCTCGAAAGTAAAAACGAGACAAAAACAAGATATAAATTACCGACCAAGAATTGTGTGCGGGGCTCGAAAAGAAAATGTCGTTGTTCCAACATCTGCATCTGGAAAGATATCAAGATATCTTTCCAGATGCAGATGTTGGTTCAGAATGTGA
Protein Sequence: MTTSTRSSGVTLKPIEVPKPLQEGEKFIKWDEDSGTGLPVTLRVDPNGFFLYWTDQNMEVEMLDIATIRDVRTGQYAKLPKMASKESNKSRKKTAAYTEESLIKALTAIRENKASVRQVCRDYGIPKSTVLDRIHGKTSDILKKRGPDPVLGTGGEEKIVNWLINISKCGFPVKKQELLDSVQKILRDSSIPNKFEDCRPGQTWYLNFLKRNPQISCRSAESINKARAQVSEESIRNWFCGLETYLEEINQKDILNRPSSIFNGDESGFALCPKTGKVLGPRGYRSLYQVKQGNEKDNLTVLVTFNANGDVCPPCVVFPYIKPPQAVVNSMPPEWCLGRSESGWMRGDVFFEYITNDFNNWLERNNIIKPVLLLVDGHKSHMSLMLSTICEQLNIILYALPPNTTHILQPADVSVFAPLKASWKKTVRNFLMKPENINKTVTKTNFCTLFEETLQDTNLATCIQNGFKRCGLYPFDPNAPDYTKCVIDTMQNINTRQSTPGTGISRADVATTKKVLKQLKTALLNKKVNYRVLIKELNLFKKTLPLETNVCELSLDTESDYNSTVNGSRDSSQVLSNSTSFTVTDLLKESEDTQLIQPPRDIELGTDKVETIQPPLNVTEDCNSISLLNITGSYLEVGSVLSLDDILVLPLNVTDEVPAPGTLDVCEQLSWIKKPDDQPSSAVSTRSIPSAVTKNLTGASAPTEGLISSGVVPSSADTIEKEEVSSITLIAPETSTHAKTAEHPVDQPNPIPMEEETLSKIVSPTQEDQIVIQKQLETSSVNVPEKIPKPKIVECPTSISITSINMSDTHKEAEPIVMNPFERHLYLPSQLVKPKKNKIPAAISSAAWREHYEMRERLKNLKQEETRKRKLERIEKQQRAKILKENKSKKKPVSKVKTRQKQDINYRPRIVCGARKENVVVPTSASGKISRYLSRCRCWFRM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00035584;
90% Identity: -
80% Identity: -