Basic Information

Insect: Coleophora flavipennella
Gene Symbol: stc
Assembly: GCA_947284805.1
Location: OX369306.1:9624767-9639273[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.5 3.8e+04 -3.8 1.6 15 19 430 434 429 434 0.81

2 11 0.0072 1.7e+02 3.7 1.3 2 10 462 470 462 470 0.94

3 11 5e-05 1.2 10.6 17.3 3 18 477 492 476 493 0.93

4 11 1.8e-09 4.4e-05 24.8 13.3 1 18 529 546 529 547 0.99

5 11 1.7e-05 0.42 12.1 15.8 1 18 588 605 588 606 0.97

6 11 3.4e-06 0.084 14.3 12.0 1 19 647 669 647 669 0.88

7 11 2 4.9e+04 -4.7 2.2 6 10 699 703 699 703 0.94

8 11 0.00043 10 7.6 6.9 1 11 709 719 709 720 0.95

9 11 0.04 9.8e+02 1.3 1.1 3 10 723 730 722 730 0.91

10 11 2.5e-06 0.06 14.8 14.0 3 19 738 754 736 754 0.92

11 11 0.09 2.2e+03 0.2 18.2 1 18 793 809 793 810 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.5	3.8e+04	-3.8	1.6	15	19	430	434	429	434	0.81
2	11	0.0072	1.7e+02	3.7	1.3	2	10	462	470	462	470	0.94
3	11	5e-05	1.2	10.6	17.3	3	18	477	492	476	493	0.93
4	11	1.8e-09	4.4e-05	24.8	13.3	1	18	529	546	529	547	0.99
5	11	1.7e-05	0.42	12.1	15.8	1	18	588	605	588	606	0.97
6	11	3.4e-06	0.084	14.3	12.0	1	19	647	669	647	669	0.88
7	11	2	4.9e+04	-4.7	2.2	6	10	699	703	699	703	0.94
8	11	0.00043	10	7.6	6.9	1	11	709	719	709	720	0.95
9	11	0.04	9.8e+02	1.3	1.1	3	10	723	730	722	730	0.91
10	11	2.5e-06	0.06	14.8	14.0	3	19	738	754	736	754	0.92
11	11	0.09	2.2e+03	0.2	18.2	1	18	793	809	793	810	0.81

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCTCACGCTTACAACAACCAATATCAGGTCACTAACAACTGGAACGGTGACGCTAACAACCGGTACACAAATACTGCATACTATCAGAACCCCGATAGCCAATACGTAAGTTTCAACGAATTCGTCTCGCAGATGCAAGTGAACAACGTGGCTGCCCCCACCACTGCAAACTATAACAACTTGCATTACCAAAATTACCCTGCAAATCATTATAACTATCAAAACATGTCTTCATCCTCCCAAAACACACAGCCTAAATCATATGACTATGCTGCAACATCTTCTAATGTCCCCAGTGAAGTCCCCAGCCAGTATGCCTTAGCACCAGATCAGAATACAGTTGCTGATGATGTGGTATTGAAGTCCAACCTTACTGCTACTGCCTCTGAATTTGTTCCAAAAAGCTCCATCAAACCATCTTTTAGTTATCAAAATGTCCACAAAGAGTCTTCCAAAACTGACAATGGTGTCAAAGAAACTAAAAGTAGTCATGGAAGCTCCTCTGACAAAAATTGGAGAGAGAGACCTAGTTCGTCTCAGCAGAACTTAGCAAGACAGAGAGATTCCTATAGACAGAATGAAACAAAAGACTCCTACTCACAGAATGAAACAAGCAGATATGAATCGAATAATCATAGAAATGAGTCTAATAGCTACAATAGAGAACCTAATAGTAGGGGCTATGAGTCAAATGGTCGTAATCATGAAAACAATCGTAACAATGATTCAAACAACCGGTATTATGAATCAAATCGTTATGAAAACAGTAACAGGGGCCAAAAAAATAGCTCAAAACCTAGAAATAAAGATTCTGATCGTACTTTTTATAACAGTTCTGCAAATAAAAATAATCAAGATATGAGGGGTCGAGGAGAGGGTTCTGGCAGAAGGAATGTGTGTGGGAGTCAGAGGTTGCGAGCTGGTGACAGGAACTACGCTGATGATGAGCAGTTTGCCAGCAACTACCTGCAGTACCGAGATGAGAAGAAAGAGGAGCAGGTGAAAGAGAAACCTGCAAAGAAACAAGATGTGTCCAGCCCTGTGAAGAGTAAAAACAAATCTACAGCCAATCAACCAGCAATTAAAGAGATGACTCAACGGGAGCGCCTCAGCCAACAGCTGGACAAGGGCACCCTGGAGTGTCTGGTATGCTGTGAGCGTGTCAAACAGATTGATGCCGTGTGGTACTGCAACAATTGCTACCATGTGATGCACCTCCGCTGCATCAGGAAGTGGGCGCTGAGCAGTATAGTTGAGAGTAAATGGCGGTGCCCGGCCTGCCAGAACACATCAGAGGAGATCCCTTCGGAATACCGATGCATGTGTGGCGCGGTGAAGTCGCCGGAGTACCAGCGCGGCGGCGCCGGTGCCCACACGTGCGGGCGACCGTGTCGGCGGCCGCGGGCGTGCGAGCACCCTTGTCCGTTATCCTGCCACCCTGGGCCCTGTCCGCCCTGCCTCGCCACCCTCACTAGACAATGTGGATGTGGCGCGGAAACCCGGTCACTTGCATGTAGCGACAAAACGCCGCAAGTATGCTCGCGTCAGTGCGGGCGCACGCTCAGTTGCGGGGTTCACACTTGCGGCGAGACCTGCCATGCGGGTGATTGCCAGCCGTGCATAGAAACTGTTACACAAGTGTGCTACTGCAATGCGGGTAAGTCCCGGACAGTCGCATGCACTGCAGAAACGAGCCGAGAAGACCGCTGGTGCTGCGGCGAAGCGTGCTCCCTAGTGCTGCCCTGTGGCGCGCACTCCTGCCGCCGGCCCTGCCACCCGCCGCCCTGCGCGCCTTGCGAGCTGCGCCCCGCCGCGGTGGTCACTTGCCCGTGCGGCAAGACCAGATTGGACCCGGATATCCGCCAGAAGTGCACGGACCCCATTCCCTTGTGCGGCAACATCTGCGCCAAGCCGCTGCAGTGCGGCCCAGCCGGCGACAAACACTTCTGCAAGGAGAGCTGCCATCAAGGTGACTGTCCTGCGTGCCCGGATAAGACCCTCCTGCAGTGCCGCTGCGGGCACTCGAGCCGCGAGGTGCCGTGCGCCGACCTGCCGCTGCTCAACAATACAGTGCTCTGCCAGAAGAAGTGCAACAAGAAACTGTCCTGTGGCCGCCACCGTTGCCGGTCCGTCTGCTGCGCCAACTCGACGCATCGCTGCACCGTCGTCTGCGGTAGAGCATTATCCTGTCAACTGCATCGCTGTGAGGAGTTCTGTCATACTGGGCACTGCGCGCCTTGTCCGCAACTAAGTTTTGAGGAGCTGCGCTGCGAATGTGGCGCGCAAGTTCTGTACCCGCCAGTGCGGTGCGGCGCCAAGCCACCGGTGTGTGACCTGCCATGTCGCAGGACACGCCCCTGCGGGCACCCCCCGCACCACTCCTGCCACCCCGGGGCCTGCCCGCCTTGCGTGGTGCTCACCGCGCGCATGTGCCACGGCCAGCATGAGGTGAGTACAGTGACCGTAGAAGACGCAAACAATAGCAAGTACCAGTGGTAG
Protein Sequence: MSQWNNSHAYNNQYQVTNNWNGDANNRYTNTAYYQNPDSQYVSFNEFVSQMQVNNVAAPTTANYNNLHYQNYPANHYNYQNMSSSSQNTQPKSYDYAATSSNVPSEVPSQYALAPDQNTVADDVVLKSNLTATASEFVPKSSIKPSFSYQNVHKESSKTDNGVKETKSSHGSSSDKNWRERPSSSQQNLARQRDSYRQNETKDSYSQNETSRYESNNHRNESNSYNREPNSRGYESNGRNHENNRNNDSNNRYYESNRYENSNRGQKNSSKPRNKDSDRTFYNSSANKNNQDMRGRGEGSGRRNVCGSQRLRAGDRNYADDEQFASNYLQYRDEKKEEQVKEKPAKKQDVSSPVKSKNKSTANQPAIKEMTQRERLSQQLDKGTLECLVCCERVKQIDAVWYCNNCYHVMHLRCIRKWALSSIVESKWRCPACQNTSEEIPSEYRCMCGAVKSPEYQRGGAGAHTCGRPCRRPRACEHPCPLSCHPGPCPPCLATLTRQCGCGAETRSLACSDKTPQVCSRQCGRTLSCGVHTCGETCHAGDCQPCIETVTQVCYCNAGKSRTVACTAETSREDRWCCGEACSLVLPCGAHSCRRPCHPPPCAPCELRPAAVVTCPCGKTRLDPDIRQKCTDPIPLCGNICAKPLQCGPAGDKHFCKESCHQGDCPACPDKTLLQCRCGHSSREVPCADLPLLNNTVLCQKKCNKKLSCGRHRCRSVCCANSTHRCTVVCGRALSCQLHRCEEFCHTGHCAPCPQLSFEELRCECGAQVLYPPVRCGAKPPVCDLPCRRTRPCGHPPHHSCHPGACPPCVVLTARMCHGQHEVSTVTVEDANNSKYQW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -