Cfla015544.1
Basic Information
- Insect
- Coleophora flavipennella
- Gene Symbol
- nfxl1
- Assembly
- GCA_947284805.1
- Location
- OX369259.1:11133514-11135991[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 4.9e+04 -7.8 5.6 15 19 136 140 135 140 0.81 2 19 0.13 3.1e+03 -0.3 0.4 4 10 171 177 170 177 0.95 3 19 1.9e-07 0.0047 18.3 13.8 4 19 189 204 187 204 0.96 4 19 0.89 2.2e+04 -3.0 2.0 6 10 229 233 228 233 0.89 5 19 9.3e-09 0.00023 22.5 12.6 3 18 241 256 239 257 0.92 6 19 1.3 3.2e+04 -3.5 1.8 6 10 282 286 281 286 0.89 7 19 2.2e-07 0.0054 18.1 11.9 1 19 292 310 292 310 0.98 8 19 9.1e-07 0.022 16.2 20.4 3 19 347 363 339 363 0.86 9 19 2.9e-06 0.072 14.5 18.2 1 18 397 414 397 415 0.97 10 19 3.3e-08 0.00079 20.8 13.1 1 19 424 442 424 442 0.98 11 19 0.0002 5 8.6 6.4 9 19 490 500 488 500 0.89 12 19 0.017 4.1e+02 2.5 8.4 3 12 511 520 510 520 0.90 13 19 0.41 9.9e+03 -1.9 3.4 14 18 549 553 549 554 0.85 14 19 0.33 8.1e+03 -1.6 1.0 8 12 570 574 569 584 0.76 15 19 1.9e-05 0.47 11.9 5.1 1 11 590 600 590 601 0.97 16 19 0.73 1.8e+04 -2.7 1.4 15 18 615 618 614 619 0.82 17 19 0.00013 3.2 9.2 15.3 3 18 631 647 630 648 0.85 18 19 2 4.9e+04 -6.5 3.4 9 13 654 658 654 658 0.71 19 19 7.3e-05 1.8 10.1 9.9 1 16 689 703 689 709 0.91
Sequence Information
- Coding Sequence
- ATGTCGCGCAAATACCGTGACGCAGCTGCAAAACTGCAGCAAAATGTTCAGAGGCATCTCAAGGAAATGAAAGAAGTTTTATCGTCTGATGATGAAGATCCATACGAGTCCAGCGTGCTTGACGGTGTGTTCCAGAGCTACACGAGCGGTGGCGGTGACAGCCACATGCTAAACCGGACTAAGAACCTTCTAGAAGAGGCTATTAGCGGCCGCGCTACAACCTGTCTGATTTGCATAGGTTCTATCAAAAGGGCTGACCCTATCTGGTCCTGCGAGCACTGTTTCTCTTACTTTCACATCTCCTGCATACAGAAATGGTCCAACGACAGCATAAACTTGAGAAGTCTGAACGAAGAGACTCACAGTCCTATTGCCGTGGTGTTACCTAAAAAAATCGAATGGTGTTGCCCGAAATGTCGTTTCTCTTATACTAAGGAACAGATACCGCGGAAGTATAGGTGCTTTTGTGGTAAGACTGATGATCCGCCCGTTCACCCCTGGTTGATACCCCATTCTTGTGGGGAGATTTGTGAAAAGAGAATGTCTGCTGGTAATAATTGCTTCCATAAATGTCTACTTCTATGTCATCCTGGGCCGTGTCCGCCTTGCCCTCAGACTGTTAATGGAGTGTGCTACTGTGGGAAAGAGAAGCAAAGAGTAAGATGTAGTTCATCAAAATGGTCATGCCAACAAAAATGTAGTAAGCTGCTACTTTGTAAGTCACATAAGTGTGAAAATCTTTGCCATGAAGGTGATTGCCCTCCATGCGCCTATACTAGCCTCCAACCATGTCAATGCGGTGGCGAGAAGGTGAAGAGACCATGCAGTGACCCAAAGTGGCAGTGCAAGAAAGTATGCAACAAACCCTTCTCATGTGGGTACCACAAATGTGATAGAATGTGCCACTCAGGAGGTTGTGAGGACTGTCCTAACTCAGGCATGAAGAGTTGTCCATGTGGTGCAAATCAGAGATACGTTGAATGTCCAGATGTTATGGAAACTTGCCTTGGTACATGTGGAAAGCAACATGAAGACTGTGAACATACCTGCCCTGAAAAATGTCACAAAGGACCATGCCCTCCATGCCAAGTGCTTATCCAAAAGAAATGCCAATGCTCTGCTCATACAAGGTCGCTGCCTTGCAGCAAGGAATACCGCTGTGACACAAAGTGTAGAGGAACCAGGCCATGTGGAAAACATCCCTGTGCTAGGAAATGTTGCAATGGAAACTGCCCTCCTTGTGAGAAAATTTGTGACAAAACACTGCAGTGCAGTCGTCATAAATGCACCATGGTCTGCCATGGAGGGCCCTGCTACCCTTGTCCGTTGGAATCTAAGGTGACTTGCCGGTGCAAAGAGACCTATATCACTGTTCCTTGCGGCAGAGAAAAGCATACCAAACCACCAAGGTGCAGTCTTCTCTGCAGAATTAAATACAAGTGTGGACACAATGAAGAAAACAAACATTCCTGTCATTTCGGAGATTGCCCTCCTTGCAAGGCGATCTGCAATAAAGCTTATCCAAAATGTGAACATAAATGTAAAGCTACCTGCCATGAGTATGTCCCAGTGGTTTTCAAGCAAGTGGAGAAGCCAGCTACTCCATGGGAAATACAGAATCCTAAAACTAAAATTATGGCTTTAGAGTGTCCTCCTTGTGATACACCTGTCCATGTTATCTGTTTTGGTGAACACGAGACAGAAAATCAACTTTGTCATACAGCTAAGCGTCAATCCTGCGGGCGGGAGTGTGGCAGACCTCTAGCCTGTGGCAATCACAACTGCACTTTACTATGTCACCTGTATGCTGCTGATCCTGACTATCCAAATGTGCCTTATTCGTGTCGACCATGTAACAAGGAATGCTTGATGCCACGTCCAGATAAATGTCAGCACAAGTGCAGTAAACGAGCCTGTCATCCTGGAAGGTGTCCACCCTGTGAGATTCTGGAGCGCATCCCTTGTCACTGTGGCATTACTGAATTGTACTTGCGATGTCGAGAACTAACTATAGCTACTAAAGACATGTTATCTTGCAAGCAGCAATGTCCAAAGAATTTGGAGTGTGGTCATAGATGCAGGAACAATTGCCACGCAGGACTGTGTGGAAATGATCAGATTTGCACCAAGAAGACAAAAATCCATTGCCCTTGTGGAAATTTGAAGAAAGAAGCTCCTTGTAACTTGGTAAGTAGTGGAGAAGCAAAAGTGGCCTGTGATGAAAGCTGTGAGGAAAAGAAACAGGCAGCAAAGATAGAAAAAGAGAAAGAGATACAAAGACAGAAGCAGATGGAGGAAGAAAGGAATCGCAGGGAGTTAGAGGAGTATGAGTGGAAGTTAAGCGGCAAGAAGAAGAAATACAAAGAGAAGAAAGTTTTAGTTAGCAAAGATGATAGGAGTGTTTTACGAAAGTATTGGGTTCCTATTTTATCAGTTTTTGTAGTTGGGATTGCAGCCTTTTACTTACTAAATGTTTAA
- Protein Sequence
- MSRKYRDAAAKLQQNVQRHLKEMKEVLSSDDEDPYESSVLDGVFQSYTSGGGDSHMLNRTKNLLEEAISGRATTCLICIGSIKRADPIWSCEHCFSYFHISCIQKWSNDSINLRSLNEETHSPIAVVLPKKIEWCCPKCRFSYTKEQIPRKYRCFCGKTDDPPVHPWLIPHSCGEICEKRMSAGNNCFHKCLLLCHPGPCPPCPQTVNGVCYCGKEKQRVRCSSSKWSCQQKCSKLLLCKSHKCENLCHEGDCPPCAYTSLQPCQCGGEKVKRPCSDPKWQCKKVCNKPFSCGYHKCDRMCHSGGCEDCPNSGMKSCPCGANQRYVECPDVMETCLGTCGKQHEDCEHTCPEKCHKGPCPPCQVLIQKKCQCSAHTRSLPCSKEYRCDTKCRGTRPCGKHPCARKCCNGNCPPCEKICDKTLQCSRHKCTMVCHGGPCYPCPLESKVTCRCKETYITVPCGREKHTKPPRCSLLCRIKYKCGHNEENKHSCHFGDCPPCKAICNKAYPKCEHKCKATCHEYVPVVFKQVEKPATPWEIQNPKTKIMALECPPCDTPVHVICFGEHETENQLCHTAKRQSCGRECGRPLACGNHNCTLLCHLYAADPDYPNVPYSCRPCNKECLMPRPDKCQHKCSKRACHPGRCPPCEILERIPCHCGITELYLRCRELTIATKDMLSCKQQCPKNLECGHRCRNNCHAGLCGNDQICTKKTKIHCPCGNLKKEAPCNLVSSGEAKVACDESCEEKKQAAKIEKEKEIQRQKQMEEERNRRELEEYEWKLSGKKKKYKEKKVLVSKDDRSVLRKYWVPILSVFVVGIAAFYLLNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091368;
- 90% Identity
- iTF_00355803;
- 80% Identity
- -