Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 6.2e-18 4.3e-14 53.2 4.1 1 35 77 110 77 111 0.97

2 3 1e-18 7.2e-15 55.7 6.0 1 35 131 164 131 165 0.98

3 3 3.7 2.6e+04 -3.7 0.1 8 16 223 231 222 234 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	6.2e-18	4.3e-14	53.2	4.1	1	35	77	110	77	111	0.97
2	3	1e-18	7.2e-15	55.7	6.0	1	35	131	164	131	165	0.98
3	3	3.7	2.6e+04	-3.7	0.1	8	16	223	231	222	234	0.76

Coding Sequence: ATGGGTCCTAAGATATTTAATAAACTGCCCGAGAACATAACATCGGCCTCAAACGAGAACGTATTCAAGACAAAATTAAAAGACTGGCTTGTCGAGCAGACGCTGTATAAAGGACAGGCGATGTCGATACACTTACCCGTAGCTGCTGTTATCAGCGGCCGGATAGCGGCGGCGGCGGCGGCGATAGAGTTAGATGGCGTCCTGGACACGTATGAGGAAGGCCGGGAATGTGTCAACTGCGGCGCGAACAACACCCCGCTGTGGCGCCGCGACTCCACAGGCCACTACCTCTGCAACGCCTGTGGCCTCTACCACAAGATCAACGGCGTGAACCGCCCCCTAGTCAAGCCTAGCAAGCGATTGTCGGCGGCGCGTCGCCACGGACAGTGTTGCACCAACTGCGGGTCGCGAAACACGACGTTATGGAGACGGAATAATGATGGCGAGCCCGTTTGCAATGCTTGCGGGCTTTACTACAAGCTTCATGGTGTTAACAGACCCCCAGCGATGCGCAAAGATGGAATCCAGACGAGAAAGCGGAAGCCCAAGAAGGCCGCCAATGGAGGCAAGCCCACCACTGAACCTAAGAAGGAGGGGCATAGCTCGCCTGGTGCGGATGAAAGCAAACCAAGCCTATCAGAGCTACCTCTCACCCCATCGCTGCACTCGACCCCCAAACTGCGCGAGAGCCAGCACACGCCGGAGAGCTCGCCGCAACCGCTCCCGCACCACACTCAGCACCAGCACAGCCACGCGCACGCGCAGTACCCACTGGGGCTGGCGTCCACGCCGTTCCTCTCCAACCCCTCGCTGTTCAACATCAAGAGCGAGCCGAGCCCCGCGAGCGGGTACGAGGCATACGGCCACGCCTCGGGTCAACACTACCACTCGCAGCAGCATTACTTGCACGCGTTACAGTACGGCCTCGGCACCGGAGAAGAAGAGGAAGGCAGCGGCTTCCTCCACCAAAGGAACGTGACTGCTCACGCCAAGCTGATGGCTTCCACGTAG
Protein Sequence: MGPKIFNKLPENITSASNENVFKTKLKDWLVEQTLYKGQAMSIHLPVAAVISGRIAAAAAAIELDGVLDTYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGVNRPPAMRKDGIQTRKRKPKKAANGGKPTTEPKKEGHSSPGADESKPSLSELPLTPSLHSTPKLRESQHTPESSPQPLPHHTQHQHSHAHAQYPLGLASTPFLSNPSLFNIKSEPSPASGYEAYGHASGQHYHSQQHYLHALQYGLGTGEEEEGSGFLHQRNVTAHAKLMAST

Sequence clustering based on sequence similarity using MMseqs2