Cfla018013.1
Basic Information
- Insect
- Coleophora flavipennella
- Gene Symbol
- GATA-B_1
- Assembly
- GCA_947284805.1
- Location
- OX369253.1:20547723-20552977[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-18 6.9e-14 52.5 3.2 1 34 48 80 48 82 0.97 2 2 1.9e-19 1.3e-15 58.1 5.3 1 34 157 189 157 191 0.97
Sequence Information
- Coding Sequence
- ATGATTTTGTATATCAAACAGTGTCGGAACATAGAGGTCATTGGCAGAGCTGATGTGTGTTGCTCCGCTCGGGCGACGATCTCTAACGGGGTGCGGGTGTTGCCAGTTGACATGGCGGAGTTTTTCACTGAGGGCCGCGAGTGCGTCAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGACACTACCTGTGCAACGCTTGCGGCCTCTACACCAAGATGAACGGCATCAACCGGCCGCCGAAGCAGCCGCGGCGGCTGGTACTGGCCGCGGAGGGGGCCCCGCCGGGCGCGGATTTCTTCAAGGGCTTCCTGTATAACAACGGGCTCGCGCCGCCGCACGCGCATGCGCACGCGCACGCGCACGTACTACCCGCGCCGGCGCCGCTGCCCGCGCCCGCGCTCTCTGACTACAAACAGAAGAAAGGGGTGGGCGCGCGCAAGCCTGGCATGGCGTGCAGCAACTGCCACACGACGACGACGTCGCTGTGGCGCCGCAACGCGCAAGGAGAGACGGTGTGCAACGCTTGCGGGTTGTATTTCAAGCTGCACAGCATCAACCGGCCATTAGCGATGAAGAAAGACTCAATACAGACGCGCAAACGCAAGCCCAAGAACAGCATTAAGGCGGAGCGCAGCAGCAAGAAGCAGGAGCTGTACCACCACCCTTACATGCCGCGCGACAACGTCAAATTGGAGAACACCATCAGCTCCATCAGTACGTATCTGAACGTAGGCAATGGCGGAAGCGTGGTGGGCATGGGCGGCGGCATGAACAGCGTCAGCTCAGTCGGGAACGTCAACGTGGGGGGGGGCCGCTCGCCGCTCGCGCTCAGCTACAGCATGCCGCAGCCCGCGCACGCGCTCAAGCTCGAGGAGCCCCCCCCGGCGCACTCGCACAGCCAGCACTTGTTGTACGAAGAGGACGTGTACCGCCGCCCCGACGCCGAGCGCCACGATCGCCCCACAGTCGTCTCCATTGGTAGTTGA
- Protein Sequence
- MILYIKQCRNIEVIGRADVCCSARATISNGVRVLPVDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYTKMNGINRPPKQPRRLVLAAEGAPPGADFFKGFLYNNGLAPPHAHAHAHAHVLPAPAPLPAPALSDYKQKKGVGARKPGMACSNCHTTTTSLWRRNAQGETVCNACGLYFKLHSINRPLAMKKDSIQTRKRKPKNSIKAERSSKKQELYHHPYMPRDNVKLENTISSISTYLNVGNGGSVVGMGGGMNSVSSVGNVNVGGGRSPLALSYSMPQPAHALKLEEPPPAHSHSQHLLYEEDVYRRPDAERHDRPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -