Basic Information

Insect: Coleophora flavipennella
Gene Symbol: ZNF296
Assembly: GCA_947284805.1
Location: OX369308.1:51587204-51629995[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0035 0.33 12.9 0.6 3 23 168 188 166 188 0.96

2 14 0.11 11 8.1 3.0 1 23 309 331 309 331 0.98

3 14 0.00016 0.015 17.1 0.4 1 23 337 360 337 360 0.96

4 14 0.048 4.5 9.3 3.1 1 23 365 388 365 388 0.94

5 14 0.0043 0.4 12.6 2.2 2 23 576 597 575 597 0.98

6 14 0.00013 0.012 17.4 2.4 1 23 603 625 603 625 0.98

7 14 1.4 1.3e+02 4.7 6.5 1 21 684 704 684 706 0.93

8 14 0.0064 0.61 12.0 2.5 1 23 741 763 741 763 0.96

9 14 0.0002 0.019 16.8 2.8 1 23 771 793 771 793 0.97

10 14 0.014 1.4 10.9 3.5 1 23 802 824 802 824 0.98

11 14 0.00019 0.018 16.8 0.8 2 23 873 894 872 894 0.97

12 14 0.00079 0.074 14.9 1.6 1 23 912 934 912 934 0.96

13 14 5.8e-06 0.00054 21.6 0.7 1 23 940 962 940 962 0.97

14 14 4.8e-05 0.0045 18.7 3.5 1 23 968 991 968 991 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0035	0.33	12.9	0.6	3	23	168	188	166	188	0.96
2	14	0.11	11	8.1	3.0	1	23	309	331	309	331	0.98
3	14	0.00016	0.015	17.1	0.4	1	23	337	360	337	360	0.96
4	14	0.048	4.5	9.3	3.1	1	23	365	388	365	388	0.94
5	14	0.0043	0.4	12.6	2.2	2	23	576	597	575	597	0.98
6	14	0.00013	0.012	17.4	2.4	1	23	603	625	603	625	0.98
7	14	1.4	1.3e+02	4.7	6.5	1	21	684	704	684	706	0.93
8	14	0.0064	0.61	12.0	2.5	1	23	741	763	741	763	0.96
9	14	0.0002	0.019	16.8	2.8	1	23	771	793	771	793	0.97
10	14	0.014	1.4	10.9	3.5	1	23	802	824	802	824	0.98
11	14	0.00019	0.018	16.8	0.8	2	23	873	894	872	894	0.97
12	14	0.00079	0.074	14.9	1.6	1	23	912	934	912	934	0.96
13	14	5.8e-06	0.00054	21.6	0.7	1	23	940	962	940	962	0.97
14	14	4.8e-05	0.0045	18.7	3.5	1	23	968	991	968	991	0.98

Sequence Information

Coding Sequence: ATGGATCCGTTAAGCTACGGCTACAACTATGGTGCACCTGGCGCCCAAACATACTCGTACAATGTAAAAGTTGAACTAGAACCCATATCAAACCCAACTGTCATAGAAAACCACAGCTCAGCAACAGACGTAGAGGTCCCTATACATAATGTTCCCAACTCAATACAGAATGTTGAGAATCCCATACAAAATATACCCAACTCAATGCTAAATCAAGCAAGTGCTGCATTAAATACGCAATTACCGCTGAATTTGCAACGTGCTGACAATATAGCACCAATGGACGTTAACAGTTTGGGAATGTATAGTAATCTGAACCCCGGTATTGTCAGTGATGCGATGGCACTGGTGGAAGGGACACTTAATATGGAGACCGTCGAAGATTCAAAGGAACATTTAAAACCTCTTTTGGCTAAAGCTAGAAGAAAAAAGAAACCGCGCGGTAGGATCAGCAATTACTGGAACAAAAAAGTGACCGATACCAACTTCCCGTTCTACGGTTGCACTATTTGTAACGTCAGCTTCACAACTCTACACGAGTTAGACCAGCACGTGACAATTCACAAGGGACGCCTCACCAGTTACGATCTGAGACTAAAAAACCAACGCAAAAGAAAACTATTGAAGAAACAAAGTAAAAAACTCAAGAAATTGAGTAAAAAATTGAAGAAGGAAGATGAAAAGACTACGGTCAATTTTGAAATTGAAATTAAACCAGAAGACGGTTATATTGGCAACGAAGAAGCTAGTAAATACACTGAGCCGAACTCTGAAAATGTGACCAGTAATTCAAATAATGAACAAAAGTGTGAAGGAAATGGCAACACTGATGAAAAGGTTAATAATGATAGCAAGGAGACCAAAGAGTCTGATGGCAAAGGAGATGAAATATTGAAAGCAGGTGACCCTCGTCTCCAGAAGCTGTTTAAATGTTTTGCATGTCACAAACAGTTCGCGTTGGGCTATTATTTGAAGTTGCACGTGAGATCTCATACAGATGAGAAACCCTACACATGTGCGCAATGCGGACAGTCGTTTATAACTGCGAGCAAACTCGGGCGGCACAACAAGAGAATACATCTCGCTGTCCGATACCAGTGTAGAATATGCTTTAGGCTGTTCAGTAGATTCGAGTACCTTGTGCGTCACTTTGACAAGAAACATGCAGAACAGAAGTTGGATGGAGAACCTTATGACTACAACGCAATCTTGCCGTACCTCAAAGACCTCGAGGACCAACTGATGAAGACAGTGGAATCCAAAGACGTAAAGGAACCTAAGCCTGAGACCCACGATTGGGGACCAATTAAACAGGACGAGACACAGGATAGCGGAGATATCAAACAAGATGCGACCCAATATTGCGGAGTTATCAAACAGGACGACACCCATGAATGGAGACGGGAGATAAAGCAGGATGAGAGTAGCCAGGAGTCGCAGCCGCTTGATGTCTTCTTGCAGCCTACTATGAATATCATTGTTGAGGAGGATGAGAAGGTGGAAATCGAGATAAAGAAAGAGAAGGAAGACCCGGAGATCGTAGATATGAAAGAGGAGACGTTTTATGATGATGATGATACGGACGCGAAGGTCAACTTCAAGGATGAAAGTGTGTCAGACGAAGACTACTTCCCGTCGAACACGTGGGCGGCGCCAGTGGAGGAGCCGCCGCCAGAGCCGCCGGTGCCGCCGAAACGTCGCTTCAAACGCAAAGACTTCCCCATGAAGTGCGAGCACTGTGAAAAGACGATCAGCAACGTTACCTACATGCGGGTCCACCTCCGCACTCATACTGGCGAGAAACCATTCAAGTGCTACGTGTGCGGCCGGGGATTCATCACTTCGAGCAAAATGCACCGCCACGTACTCACTCATGGCGAGGCAGCCGTCAAAAAAGCGAAATTGGAGATGGAAGGCATTAAAGAAGATCCTGACAAACCTGTAGATGATGAGGAAACTGGCGAGGGGAAGAAGAAAGGGAAATCTAGCAAGAAGAAGAACAAGGGCTCCGATACCGTGAAAGCTAAGAGACGAAACCAGCCGCGGCCACATGCCTGTAATTTCTGCAACAAGCGGTTCCTACATCAAGACATGCTTATGGTGCACCAAAAGTGCCACGAAGGCGAGAAGCTTATCCTGAGATGTAACTTCTGCCTAGAAGAGCAGCCGGACGACGAGACATTGAAGACACACGAAGCGACGCACACGGGGCCCAAACCATACCTGTGCACCGTGTGCAACCGGACCTACACGAAGAAGGAGTCCATGGTGTACCACAAGAAGACCCATTTTGACACAGATCGCAAGGCATTCTCCTGCGACATCTGTTCCAAGTCTTTCAACGAGCAGTGCAAGTTGCAGCGGCACATAGTGTCCCATAGAGTGGACAAGTTCACGCTGAGATACGAGTGCCCGGTGTGCGCGCACATGTTCCACACCAAGTACCACGTGGAGATGCATCTAGCCACGCACCTTAAAGAGGGCACCATATCGGAGAACAATCGCAGTGAAATCCTCGCAATGGTGCTACAGAACGCTCGCAAGATCCCCAAGCCGGGGACCATTTTGGGGACTCCGGCCCCCGATCTCGTGCCGTCGCAAGATGAGCGCTCCACAGTGTGCAATATATGCGGCGAGGTGTTCCAACACTTCTACTACCTCGAGGAGCATCTCAAAAGCCACGGCTCAAAGATAGCGGTAGAGGATCTGAACAGCAAAGAGGAAGTCAGGAAGCATGTGTGTCCCGTCTGCAACAAAGGATTCAAGCTGCCCTACTATTTGAAACTGCATAGCTTCACTCATACAAAGGAGAAGCCGTTCATATGCCAGCAGTGTGGGAAGGGCTTTATTACTAAAGGCAAACTGAAAAGGCATCTGGAATCGCATACGGGACTGAAGAAATATCAGTGTCACATCTGCTACAAGTTCTTCACGAGGCCGAGTTATCAGAGGATTCACGTGAGGACCATACATGGAACTCAGGATTACAATTTTACACTGGAAGGTTTTGGGAAGCAGTTTGATACGTACAGTGAGAACAGTAATTAA
Protein Sequence: MDPLSYGYNYGAPGAQTYSYNVKVELEPISNPTVIENHSSATDVEVPIHNVPNSIQNVENPIQNIPNSMLNQASAALNTQLPLNLQRADNIAPMDVNSLGMYSNLNPGIVSDAMALVEGTLNMETVEDSKEHLKPLLAKARRKKKPRGRISNYWNKKVTDTNFPFYGCTICNVSFTTLHELDQHVTIHKGRLTSYDLRLKNQRKRKLLKKQSKKLKKLSKKLKKEDEKTTVNFEIEIKPEDGYIGNEEASKYTEPNSENVTSNSNNEQKCEGNGNTDEKVNNDSKETKESDGKGDEILKAGDPRLQKLFKCFACHKQFALGYYLKLHVRSHTDEKPYTCAQCGQSFITASKLGRHNKRIHLAVRYQCRICFRLFSRFEYLVRHFDKKHAEQKLDGEPYDYNAILPYLKDLEDQLMKTVESKDVKEPKPETHDWGPIKQDETQDSGDIKQDATQYCGVIKQDDTHEWRREIKQDESSQESQPLDVFLQPTMNIIVEEDEKVEIEIKKEKEDPEIVDMKEETFYDDDDTDAKVNFKDESVSDEDYFPSNTWAAPVEEPPPEPPVPPKRRFKRKDFPMKCEHCEKTISNVTYMRVHLRTHTGEKPFKCYVCGRGFITSSKMHRHVLTHGEAAVKKAKLEMEGIKEDPDKPVDDEETGEGKKKGKSSKKKNKGSDTVKAKRRNQPRPHACNFCNKRFLHQDMLMVHQKCHEGEKLILRCNFCLEEQPDDETLKTHEATHTGPKPYLCTVCNRTYTKKESMVYHKKTHFDTDRKAFSCDICSKSFNEQCKLQRHIVSHRVDKFTLRYECPVCAHMFHTKYHVEMHLATHLKEGTISENNRSEILAMVLQNARKIPKPGTILGTPAPDLVPSQDERSTVCNICGEVFQHFYYLEEHLKSHGSKIAVEDLNSKEEVRKHVCPVCNKGFKLPYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLESHTGLKKYQCHICYKFFTRPSYQRIHVRTIHGTQDYNFTLEGFGKQFDTYSENSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -