Cfla045482.1
Basic Information
- Insect
- Coleophora flavipennella
- Gene Symbol
- zfy1
- Assembly
- GCA_947284805.1
- Location
- OX369261.1:4511581-4531690[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.021 1.9 10.5 0.1 1 22 79 100 79 102 0.89 2 12 3.1e-06 0.00029 22.5 2.2 2 23 208 229 207 229 0.96 3 12 4.1e-05 0.0038 19.0 4.2 1 23 235 257 235 257 0.99 4 12 9.3e-05 0.0088 17.8 2.5 2 23 264 285 263 286 0.94 5 12 1.4 1.3e+02 4.7 1.7 5 23 299 317 296 317 0.96 6 12 0.0012 0.11 14.4 2.4 3 23 324 345 323 345 0.96 7 12 0.12 11 8.1 0.2 2 23 363 383 362 383 0.96 8 12 0.00091 0.086 14.7 0.9 3 20 391 408 389 411 0.85 9 12 0.00011 0.011 17.5 0.2 1 23 419 441 419 441 0.98 10 12 0.0027 0.25 13.2 7.2 1 23 447 469 447 469 0.98 11 12 3.1e-06 0.00029 22.5 1.3 1 23 475 499 475 499 0.98 12 12 0.00071 0.067 15.0 5.1 1 23 505 527 505 528 0.95
Sequence Information
- Coding Sequence
- ATGCGCGCTGCTCCATCACTCCCGGACACTCGCCTGGCGCTCACTCACAGGCACCTTAGCCGATTGATCGCCTTTGGCTCCCCGGCGACCTCCCGTATATACACGGAGGTGACACCGACGGAGCCATACGACCTGATGGCGCGGGAAAGCTGGATCTCCGATGGGTCAGATGTCGACCCCACTGAGAAAAGGGACACTCTCGAGGAGGACCTCCACTTCTCCAAGGCGCGGGTCTACCCGTGCTCTCAATGCGGGGGCAAGTTCCCCTCACTGAAGGACCTCCGGGGGCATAAGGTCCTCGCGCACGCCCCGGCCGCGTGCTCCACAGCCAAGACGAGCTACAGCAGGATGGTCACCGCCAGGACCATCAAGAAGGAAGAGAAGAGTGATGATGTCAAGGACAGTTTAGCCGGCACGCTGCTTTCAACCCTGGACTCGAAGGAGTCTATCACGAGCAGCATGCTGCAGGCGTTGGAGACGATAGCGGAGGCTAAGCCCAAGATCGAAGCGCTGATCAAGCAGGAGCCGCGCAGGAGGAGGCGAGACTTCGTGTGTCGCATTTGCAAGGTGGACCAGGTGAGCGACGCGGGCTTCCACGCGCACCTGAAGATCCACCCGCTGGAGTGCCTCACGTGCGGCAAATGCTTCTTCCGCCGCTCCAACCTGGCGCTGCACATGAAGATACATCTCGGTATCAAGAACTACAAATGCGAGGTGTGTGAGAAGCGTTTCCGGACTCGGCAGAAGTTGAAGGAGCACCACAACGTGCACACCGGCCGCACGCCCATCAAGTGCACCGTGTGCGACGAAACCTTCCGCCGGTACTCCAACATGGTGCAGCACAGAGACCGCCATCATTTCCACAAGAAGACCAAAGTCCGCGACTATGTGTGCCACTGCGGCGCCATCTTCCATTCTCGGCCCAAGCTGCTCTGGCACAAAGAGACCCACGACGGAAAGCCAAAGGCCTGCCTCTATTGCAGCGACAAATTCGTCCACTCGTCCTCGCTAACCAGACATATTCGGCGCACGCACAACGAGTATTACCTGTCTAAGCTCAACACGTCGAAAGCCAATGAGAATGTGTCGTGTCCCGTCTGTAAACAGGTGTATCTCGGAACGAACCTTCGAACGCATCTCCTGACTCACAGCGGCAAGCGTCCCTACCTCTGCATCATCTGCAACAAATCCTTCACCACCAAATGGAACCTCAAGCTGCACCGCTGGACGCACATGAGCCGGTCCGCCAAGCCCTACAAGTGCACCCTCTGCAAGGGCGCCTTCATCCGCCAATCCGAGTACGTCGCCCACATGAACGCGCACAAGTCCGTGCGCCCCTACACTTGCAACTACTGCGGGTGCCAGTTCATAAGGAAATACAATTGCCAACGGCACGTCAGAGAACACGAAATGGCTAAGAAATACGTCTGCAAGGTACCGGAGTGTGGTAAGTCTTTCCATAGGAGTTATTACCTGTCCGAGCATATGAAGGTTCACAGTGGGGCGAGGCCGTTCTCTTGCTCGATATGTGGGAAGACTTCCAGTAATAAGTCTAATCATAACAAGCACGTAAAGATACATCATGCTAGGGAACCGATCGCGACTGAGGCGTAA
- Protein Sequence
- MRAAPSLPDTRLALTHRHLSRLIAFGSPATSRIYTEVTPTEPYDLMARESWISDGSDVDPTEKRDTLEEDLHFSKARVYPCSQCGGKFPSLKDLRGHKVLAHAPAACSTAKTSYSRMVTARTIKKEEKSDDVKDSLAGTLLSTLDSKESITSSMLQALETIAEAKPKIEALIKQEPRRRRRDFVCRICKVDQVSDAGFHAHLKIHPLECLTCGKCFFRRSNLALHMKIHLGIKNYKCEVCEKRFRTRQKLKEHHNVHTGRTPIKCTVCDETFRRYSNMVQHRDRHHFHKKTKVRDYVCHCGAIFHSRPKLLWHKETHDGKPKACLYCSDKFVHSSSLTRHIRRTHNEYYLSKLNTSKANENVSCPVCKQVYLGTNLRTHLLTHSGKRPYLCIICNKSFTTKWNLKLHRWTHMSRSAKPYKCTLCKGAFIRQSEYVAHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCSICGKTSSNKSNHNKHVKIHHAREPIATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -