Cfla031664.1
Basic Information
- Insect
- Coleophora flavipennella
- Gene Symbol
- -
- Assembly
- GCA_947284805.1
- Location
- OX369286.1:1622893-1626418[-]
Transcription Factor Domain
- TF Family
- TEA
- Domain
- TEA domain
- PFAM
- PF01285
- TF Group
- Helix-turn-helix
- Description
- The TEA domain is a DNA-binding region of about 66 to 68 amino acids that has been named after the two proteins that originally defined the domain: TEF-1 and AbaA. The TEA domain is located toward the N terminus of eukaryotic transcription factors of the TEA/ATTS family. It shows a three-helix bundle with a homeodomain fold [3, 1]. Two α-helices are nearly anti-parallel and pack on either side of the third one, which is the DNA-recognition helix of the TEA domain. Phosphorylation of one or both of the two conserved serines found on the DNA-binding surface could interfere with DNA-binding activity, by introducing electrostatic repulsion and/or steric hindrance, and help regulate the transcription factor activity of the proteins [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.1 2.5e+03 0.2 0.0 5 16 77 88 74 90 0.93 2 33 0.026 6.4e+02 2.1 0.0 5 17 96 108 92 128 0.84 3 33 0.24 5.7e+03 -0.9 0.0 5 16 134 145 130 147 0.91 4 33 0.24 5.7e+03 -0.9 0.0 5 16 153 164 149 166 0.91 5 33 0.24 5.7e+03 -0.9 0.0 5 16 172 183 168 185 0.91 6 33 0.24 5.7e+03 -0.9 0.0 5 16 191 202 187 204 0.91 7 33 0.24 5.7e+03 -0.9 0.0 5 16 210 221 206 223 0.91 8 33 0.24 5.7e+03 -0.9 0.0 5 16 229 240 225 242 0.91 9 33 0.24 5.7e+03 -0.9 0.0 5 16 248 259 244 261 0.91 10 33 0.24 5.7e+03 -0.9 0.0 5 16 267 278 263 280 0.91 11 33 0.24 5.7e+03 -0.9 0.0 5 16 286 297 282 299 0.91 12 33 0.23 5.5e+03 -0.9 0.0 5 16 305 316 301 319 0.91 13 33 0.22 5.4e+03 -0.8 0.0 5 16 324 335 320 337 0.91 14 33 0.24 5.7e+03 -0.9 0.0 5 16 343 354 339 356 0.91 15 33 0.24 5.7e+03 -0.9 0.0 5 16 362 373 358 375 0.91 16 33 0.24 5.7e+03 -0.9 0.0 5 16 381 392 377 394 0.91 17 33 0.24 5.7e+03 -0.9 0.0 5 16 400 411 396 413 0.91 18 33 0.24 5.7e+03 -0.9 0.0 5 16 419 430 415 432 0.91 19 33 0.24 5.7e+03 -0.9 0.0 5 16 438 449 434 451 0.91 20 33 0.24 5.7e+03 -0.9 0.0 5 16 457 468 453 470 0.91 21 33 0.24 5.7e+03 -0.9 0.0 5 16 476 487 472 489 0.91 22 33 0.24 5.7e+03 -0.9 0.0 5 16 495 506 491 508 0.91 23 33 0.24 5.7e+03 -0.9 0.0 5 16 514 525 510 527 0.91 24 33 0.24 5.7e+03 -0.9 0.0 5 16 533 544 529 546 0.91 25 33 0.24 5.7e+03 -0.9 0.0 5 16 552 563 548 565 0.91 26 33 0.24 5.7e+03 -0.9 0.0 5 16 571 582 567 584 0.91 27 33 0.24 5.7e+03 -0.9 0.0 5 16 590 601 586 603 0.91 28 33 0.24 5.7e+03 -0.9 0.0 5 16 609 620 605 622 0.91 29 33 0.24 5.7e+03 -0.9 0.0 5 16 628 639 624 641 0.91 30 33 0.24 5.7e+03 -0.9 0.0 5 16 647 658 643 660 0.91 31 33 0.24 5.7e+03 -0.9 0.0 5 16 666 677 662 679 0.91 32 33 0.24 5.7e+03 -0.9 0.0 5 16 685 696 681 698 0.91 33 33 0.23 5.5e+03 -0.9 0.0 5 16 704 715 700 718 0.91
Sequence Information
- Coding Sequence
- ATGTCGGGTACTATGTGGTTGTGGCGCCGCAAGTCGGAACTGACGGTGACGGCGGTGTGCGGTGTGGGGTGTGCGGTGCGCGGTGATCGGTGCGCGGTGTGCCTCACCTTGCTGCTTCTCTTCGAGTTATTGAAATCTGCTCGTACAACCCGCCCGAACGTCACTTTCTTCTGTCCCACCCGACTGGAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGTTTTTGGACGCTCCAGGCACCTCCAGGTGTCACTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCTAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAATGGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTATCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTACAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTACAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTACAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTGCAAAACGCGCTGTTGGACGCTCCAGGCACCTCCAGGTGTCGCTGGAATGACGACGTACAAAAGGACTTGAATAAGCTCAATTCGAAAACTTAA
- Protein Sequence
- MSGTMWLWRRKSELTVTAVCGVGCAVRGDRCAVCLTLLLLFELLKSARTTRPNVTFFCPTRLENALLDAPGTSRCRWNDDVQNAFLDAPGTSRCHWNDDVQNALLDALGTSRCRWNDDVQMALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRYRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQNALLDAPGTSRCRWNDDVQKDLNKLNSKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -