Cfla015236.1
Basic Information
- Insect
- Coleophora flavipennella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_947284805.1
- Location
- OX369259.1:4067788-4069278[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-14 1.1e-11 45.6 0.0 1 38 57 95 57 101 0.93 2 2 3.2e-18 1.6e-15 57.9 0.0 1 43 263 306 263 308 0.95
Sequence Information
- Coding Sequence
- ATGTATACAATTGGTTTTTGTGCACCAGTGCCTGTTCGGGACGAACTACAAGTAAAGACAAGAAAATCTCATGTTTTGAAGAGCTATTTTCTAAAGACTCATTTTTGTTACAGATTGAAACGAAGTGCATTGGACTGTGCGAGCAATAGCACTGCTCGACGGACGTACACCGAAGACGAGCTGCAGTCAGCCCTGAGGGACATACAGTCCGGGAGACTGGGCACCCGGCGAGCTGCGGTCGTCTATGGCATCCCGCGCTCCACTCTACGCAACAAGGTCAACAAATTCGGCATCGCCACAGACCCCCACGAGTCAGAACCAGACAGTGACCCAGAACGGACCGACTCCCCACCCTCAGTCATACTAAAGATCCCCACTTTCCCCCCGCCGGACGAAAAGAGCTCCTCCCCGGCCACCCCAGTCACAACCCCCGTAACACCAATCACGCCAGTCCTACACCCTCCGCAGCCGACTCTCAATCCCTCATCACACCTCATTCTACCCCCATCAGTATACGCTGACTCACCTTCGAACCAGCACCTCTTCACGTCGCTTAGTGACGTCATCGCGAAGAGCATAAGCCAAAAGTTCACCCAGTCCCTCGATAGACCACAGCACGATCTATCGTTCATGCGAGCACCAGACAGACACGTCTCAGTGATAAAGACGCCACCAGACAGCCAGAGGAACTATCCAACTCCCAGCAACTCTCGAGCCAGCACGAACAATGGACAACCCGCAGGTGGGAAGGGCACGCGGCCTAAACGTGGGAAGTACAGGAACTACGATCGGGACAGCCTGGTAGAAGCTGTGAAAGCGGTCCAACGAGGTGAAATGTCGGTTCACCGTGCTGGCTCGTACTATGGAGTGCCTCATTCGACTTTGGAGTATAAAGTGAAGGAGCGCCATCTGATGAGGCCTAGGAAGAGAGAACCCAAGCCCCAACAAGACGTGAAGCCGCAGCCTCCAAAACCTCCACCACCAAAACCGCCGACAAAACCGTTCTCGAATGGTTTGAATGGTCCGGACACGCCTAGCTATCCTCCAGGATACCCATTCTGGCCCGGCGCTGGTTTCGCACCGCCACCTACTCCAGACCTGTACGCCTCGCATATGATGCGTAGGTTGCGCGAAGAAGCTCCTCCGCCTGCAAATGGGTCTTTCCTTGAAGGGATAATTAGGTCGAGTTTGGAGCGGCCTGGTGCCGGAGCGCTTCTGCAGCGGTTGACGGCGGAGCCGCGACCGCCGATGCCGAGTGACGCGCCGAGTCTCATGCGACGGCTGACGGGCGAGGCGGACGAGCCGCCGGTGCGACGCGCGCGGATCGACAGCTCGGACCGTCAACTGCACGCGGATTTGCGCGACGTGGTGCAGCGGATCCGCGCGGACAAGCTGCGGCCGCCACCACGCAATGGCACGCCAACGCCGCCTGCGCACGACGCGCTGTCCCCACCCCCCGCGCCGCCCGCCGCTCCCCCCGACCGCGCCTAG
- Protein Sequence
- MYTIGFCAPVPVRDELQVKTRKSHVLKSYFLKTHFCYRLKRSALDCASNSTARRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGIATDPHESEPDSDPERTDSPPSVILKIPTFPPPDEKSSSPATPVTTPVTPITPVLHPPQPTLNPSSHLILPPSVYADSPSNQHLFTSLSDVIAKSISQKFTQSLDRPQHDLSFMRAPDRHVSVIKTPPDSQRNYPTPSNSRASTNNGQPAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDVKPQPPKPPPPKPPTKPFSNGLNGPDTPSYPPGYPFWPGAGFAPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAGALLQRLTAEPRPPMPSDAPSLMRRLTGEADEPPVRRARIDSSDRQLHADLRDVVQRIRADKLRPPPRNGTPTPPAHDALSPPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -