Cdea019513.1
Basic Information
- Insect
- Coleophora deauratella
- Gene Symbol
- -
- Assembly
- GCA_958295455.1
- Location
- OY282398.1:13035415-13046139[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.37 42 6.1 0.2 2 21 1641 1660 1640 1661 0.87 2 7 0.0001 0.012 17.3 0.6 3 23 1772 1792 1770 1792 0.95 3 7 0.0009 0.1 14.3 4.7 1 23 1807 1829 1807 1829 0.98 4 7 0.0061 0.7 11.7 4.2 1 23 1865 1887 1865 1887 0.98 5 7 0.014 1.7 10.5 4.7 2 23 1912 1933 1912 1933 0.95 6 7 0.016 1.9 10.3 0.5 1 20 1957 1976 1957 1978 0.93 7 7 5.9 6.8e+02 2.3 0.8 5 23 2345 2364 2343 2364 0.91
Sequence Information
- Coding Sequence
- ATGGACAGATTGACACAGTTACGAGGAGAGGCGGGGGGCTCGCGTGACTCCACGCTGGAAGCCTCTTCAGCGCCCAGCGAAGCCTACATCACTGCCAATGACGGTAGCTCCTCTAAATTCTTCTCTCTGTCTGAAGACGATTCTACTTTTGACCTATCTCCTCTCAAAGACGTATCTCTGGCGTCCGCTGTGGAGCCGGTCAAGTCTATTACAGAACCTGACGATCTGATATCAAACCTGTCTCCAATATCTAAGAAAAGTGACTTATTAGATAGCTACAAAATTGGTAAACAGATTGAGGCTGCAAACATCTTATCTGGTGGTGTCAACATTTTTGATGACAATGACAATTCTTATGATGGCGATGAGCTGGTAATTGACGACAGGGCCAGTGTGCTTGACGACAAATTGAACCCAGAATTAAAGGAATCTGAGTCGGAGCTTCCATTTCAAAAAGCAGATGATATAGAAGGCACTTCAGTTGAGAATGAAGCTATTGCAAGTAAAGATACAGAGGTGGTGCTACAGATTGATGGTAAAAATGTGAATGCTATAGATATTGGGAATGGGCTGTACTTGTACCGGAAAGAGGGTGAGGAAGAGTTGGCAGCGGTTCAAATAGTTGATGATGACCAGCAACATCCCAGCTTCAAGTTCCTCAAAGTGCGtGAGAATGCTGAGGGCAATTTAGAAGTATATGAAGAAATAGAGATAGAAGTTCCAAAGGAAGTGCCTACAAAAGAGGGGAAGACTGCTGAAAAGAATACCTCACATGTGCCTCTTAAAGATATAAATAAGGTTATTAGCGATAAAAACTGCACTAAAATTGTAGAGCGAAAAAACACGGCTCCATTTATTGAACCATCCCCCGCATTGTCAGTAAATCTGGATACTGTTTCTGAAACAAGTCAAGTCTCGGTGACAGAAGCAAAGTCGGATTCCattaaaaacagcaaaatgATGAAATACAACGAAACCAAGAAGTCTCCTTTCATACACTCAACTCCCAATAAGGAGGGAATACCATTAACAAAGGTGATGGTGAATCAGCAACTACATCCTAATAGACATTCTGATAATGTAAAAACTATAGAGGTTCATACAGATAACATCAAACAAAAAGgggatattaaaaatatcaaaaataaagaaatgacAGAGACAACAGATGCGTTCAACGAGAAGAAAGAAAAGACAGTAGAAAAATGTATTGATATGTCTGGAAATGAAAAGTTTGAAGTCACAAAGACCAAAAATGAAAAACAAGACACAAGTACATGTGACATAATAGAACCTAAAATAGAACATAATtctgtttcaaaaaaaatcaatttagtTGTACCTTTCGCCCAAAAAGATAatgaaacaaatgaaaataaagttcTGAAAGGCACTGACACAAATGAAGCATCAAAGGTCAAAAATATAACGGTAGCAAAAAATAATCAAGATAGTCTTGAAAGTAAAAATAGTTTTGAAAAATACTATAAACCAACTGATAAATCTCAAGTCGATAATGATAAAATAGCTTGTATTGAAAAGGATTCTAGGGTTAATGAAAAAGAAGATAAGAGTAACGAAATACTTAAAGACAAATTAATTAAACCGATTGTCACTTCAATTGAAAAAGACAATAAACCTGACAAAACACCAATCATTGTTAACAAAGATAATGAATGTGGTTTACTTATAGAGAAAAAGGAATCAGCTGTGGTAAACCATGAAAGTAAAATGAATATTATATCTGGAGTAGAAACAAAGCAAAACGAAGAACATTCGGAAAAGGTAGAAACTGAGAGTGTAAAACAAGTGGAGTGTAAGAGTCTTAAAATGGAGATGGTTACTCTTGCATCAGACTTAAAGATATTTGACACCGAAAAATCGAATGTAGATGCAAAAGATAAAAATCTGAAAGAAAACAATGCTATTACTACAAaagaattaaacaaaaatactcaatgtacagaaaataaagatttaagttttttagaTCCTAACAAAGAAATGGACAAgttaaacaaaaatgacaaacataAAGAAGAACATCATCATAAAAAGATTGTTGTCGATCAACCTGACCAGTCTACAAAAATTGATGAAGATGTAAAAGCTACACCACTACTAGATACTATAGCTACTAAGCAATTTGCGCAGGATGCCCCACTTCCTACATTTAACAAAGATAAACCTATACATGGTCACAGCATTTCTGCAGATATAAAGGAAAACCTAAAACGTGAAAAGGATACAGATTTGGTTTTaacagaaaataatgaaaaaagtaATGCGCATATAACCCAAGTATCAACAAATACAGGTAGTGTTGACTCTAAACCAGAGCAACAATTTGAAATGTTTTCCACCTATGATAGCCTCAGCAAAGAAATATCTAACCACAAAACATCAAATGAAACTTCCATTGTCTTAATTTCACCCCCAATTAATCACAAAGAAGTGGAGAAAAAAGAAATAGTAGCTGCTGAGTCATTTCCAATACCATCCATGAAACTTATTACACCTTGTAGTAATAGTAGTAACGAAACTTCTACCAAAATAGAAGAAAGTATAAAGAAACAACATATTCCTATAAAACCAATGGTTGATAATACATCGAAAGCTAAAGTTGTAATACAGGAAAACACTGAAGTTGACAACTTACTTAAAACATATCCTGCGAAAGTTGAAAATGTGGCATTGAATACTGTTCCTACTTCACAAAATATGTCTGAAATTAAGAAAGATacaattaaagaaaaagcttacGACAAAAAAGCAATAAACAATAATAGCTCTGCTGTTCCTTTTGGTAAATGGACAGAAGCTAATAGACAGGAATTcctaaacaaaattaaagaaaCTAAAGTCCCTTCTACTAGTTCAAATGCCAACCAAATTAAACAACCAAATGATTTAAATAGGCGGGATGTACTGCAAAAAATCGACAGTCAACGACAGATTAATAGTGCAGCCGGTAAAATAGATTTAGCCGCAGCAAATAAGCTGACTGTAAAGAATGAAACCAAAAAATTCACAATGAAACCGATCGCAAGACCTGAGACTAAAATTCCGGTTAAAACTGAAGCGCTTGTAGTAAATAGAGTGACTACTGACAGTGACAAACATCCAAAACAAGAAAGTCCTCCTAAGCATTTCAATATGCCGAATACAACATTTAGTGTCTCTACCTCCCCTAAATCAGAGAGTACAGTAAAGAGAACGGGCATCTACAATCAAGATTTAATTGATAGAACGATTGAAGACATTATAAATCGAGCTATTCCAGGATCTCAGCAAGATGACAAGAAAAGCAATGTTACGAAAGAAGATAAAAAGAATTCAAAACCTAAAGATTTACCTTACCCACGCAGTTATCAAAGCAAAGAACCACAGCCAAAATCATCGCCTTTAGatgttattgaaatgaaaatgaatgaacTACACGGCATACCTTTCGTTGAAAGGCCCCCGCATGAACTGCCTAAAGTAtacaacaaagatataaaaacttatgcaaaacaagaaaaaattaaatctcCAGCAAAAAAAGATAGTAAGATTCCAAATTTAGTGCCATTCTCAAGTGTTAATCAAACCAAGGTtttacaggaaaaagttattGAAGTTGATTCTGAAGAAGAAGTAATAGAACACGAACCCATTACTGGAGATATTGGActaaaaaaagttaataatacgTCAAAGCCTGTTGTTAGTATGGGGCACACTACTCATGCTGTTGCACGAGCAAACACTGATTCCAAAAAAGAAACTATTATAACTGAAAAAGATTTCGACAAGTTTGCAAGGAGGAATTcaattacttatgaaaattgTCTTACTGTAAATTTTGAGGACAGGGAGAAACCTAATGTGGTTCATACTGTAAAAGAAAAGGATTCTATCATAAAACCACTTCAAAATGAACAATCCTTGACCAATACAAAAAATAAGGTGTCGCCTCAACAATTAATATTGCATCAAAATAAACATTCAGACAAAATACAACTAACATCTAAGTTGACGCCAGCACATGAAGATATGCATAATAAGAACTATCCGTCTAAATTACAAATGGCCTACCAGTCAGCGCTTACAGCAAAAAAGCATACTGAATCTCCTATAACTATAATTGAAGATAGGCCCGTCAAAGTAGTATACATGGATGTGCAATCTAGTTTCTCTACGAACCAGATCAATGTTCAAGGCAAAGATTTGTCGCCTACTAAAAAACAATTAACAGTGGCTGAAATCACAACAGCGGCCACTTGTGACTCCCTTGATTCAGATATGCTCGAAACTATTAATGATGTAAAATACCAAACTAAATCTAAGACTAAACACCAGCGAAAACAAGTGTTGACTCCTGTTGATATTCCCGAGTTGGAGCTTATCGAGCCAAGCGATTTAGGTGTTGAACATTCacctaaaaagaaaaagaaaatagagGACAAATCTGATAAAAGTTCTAAAAGCATTGTTCctaaaaaatcttatttactAGGTCGTGGTATAGCAGATGAAACTGTTCCTTTTCAGCATGTAGCTAAAAGTCCTTTGAAAGAGCCATTTGATCAGAGTAATGCAGTGTTAACTCATAATGCTACAGCAACAGCAATTGACAACTTAGTAAAAGCGGCTGAGTTACTTGAAACACAGGCAGAAAATTTGAACTCCAGTGCTATATCTGTGGGCTCGGATTCTCAAAAAAGTACACCTGCAAAACGAGGCCGAGGTCGACCGAGGAAATATCCTCTTCCAGATGGGTCACAGGATAACAACAAAACTCCGACTCCTCAAAAGAAACCACGACTTATTGATGCAAAAAAACCTAAAGTTGATACCGTTTCTGACGACGATGACAGTAGTGATGAAGGGATTATTCAAGAAAATTGGACTATGGGCAAAATAAATGAGAATATTGTATGTCCAATATGTAACAAGCTTTTCCGATCTGAAAATGTTGTTTTCAAACATGTTAAACATTGCACAGGCCCTTCGCCTAACAGATCTGAGTCAGATAAAAGGAGTATTCGTACAATATCTGGACACTCTCAAGAATCTGACTCTAAATCTTCACAAGACAGTAAGTTAGATGATGTTGACTATGAGCCAGTAAAAACAACTACGAAGAAAGAAACGCCTAAGAAACGAAATTCCAAAGAGATTTTGGAGAGTAATGTTGATAACCAAAAAGTTATAGTTATCGAGGACTCACCTGCATTAGAAAAGTCTGAAATTGGCGAACTAAGTCAACATAAATCTAGAAAAAGAACTACCAAATCTAAACTTCCTCATTTTATGACCAATCTAGCTTGCGAGACGTGTGGCAAAACATTTAGGCAGTTATCGTACTTGGTGAATCATAAACTGCAACATGAGAAAGATGAACCAAAGAAAACAGAAACAGAAAAAACTGTTTTCACTTgtgaaatttgtaaaaaagaatTTAGAAAGCTACATCATTTGGTCCAGCATAGGCTGATTCATAATCCTAGTAGCATTCCATCCAGAACCTCGCGAAAGAGCTcttcagaacaaaatgttgcAAAAGAACAGAATGTTTTAAAACAAGCCGATGATCAAAGTGCAGCTTTCCGGTGTGAGCCGTGTGACAAATCTTTTAGAAAGCTGCATCATTTGGTAGAGCATAGAGAGACCCACGACGGTATTAATAGGCAGAAAGGAAGTTCGAATGCTTCAGTTGTTATCGAGAAGTCTCCACCGCCGCCACCGGAATGCGACATCTGTAAGAAAAGATTCAGAAAATTACACCACCTAATAGAGCATAAGGAACAGCATCTAGAAACGAGTTCAGAAAAATCTGATGACAGGAGTGTCAAAAGTGCTTTATCGACTAAAGACATAATTCATGAATGTTCTCTTTGTTATATGGTATTCCCGAATGAGCATTCTTTGAACAAGCACACTATAATATGCCAACGCAAAAAGAGGCAGTTAGCTGCAAAGCAAAACAAAGCTGTTGAAAAATCAGCTGAAGACGGTACTACAATGCCAAAAATTGATGACACACCTAAAGCTACTGAAGTTGAATCTAATCAAAAGAATATTGAGGAACAACCTGATCCAAAAGCAGAAGAAGTATTAAAAGCGCCATCACAAAATAATGATAAAGAAAGGCCAGAAAAGGTTGAAGAAGCAGAAAAAGTTACCAAATCAACGaatgaaaacaaaatagaaGATAAGCAAATTTCTAAAGAAAATGATTTGAAAGTTTTAGAATCTAAACCTTTGTCTGTTAAGAGAGATAGCGTCAAATGTAAtgaatcaaatttaaaaaccaaTGATGTTACCGACACACCGAAAAAGAGAAAAGTTGAAGATGAAAAAATTAAGAATGAAGTTATTGTTATTGAAGACACTCCTAAGAAGAAAACACCTATTAAAGATAAAATGGCTCTAGCTATTACAAAGCGGAAGAAGACAACAAATCTTCCTACATCAACCATTGATAAGGATGTTCAGATTGCTGCGTCTAGTGACGATGAAGAGGTCCGCTACATGCTTAACCCTAATTTCAAAGTAGATGATACTGTAGAAGGAAAATTGTTTATGAAAGTAAGAGCTAAGAAGCGAAATTCCCTTCAGCTAGAGAGGCCAAACTCCAAAAATGTAGTAAGGCGAACCTCTTTGCAACAACCTCCCAAAATTTCGCGTCAGAAGCCAAAGCTAGTAGAATCTAGAATCTCGTCGACAATAAATACAGAGCCATCTTCATCCAAAAATAAGCCTTCAAAATTGGAACCCATACCTTCTACTGACTCGGATGATAGTGATGTGAAATATTCTTTCCCTGAAACTGCGCTTCATAATGTTAGATCACGAGAAACGGCACAAGTTACAAAGACGCCTAAGATGAAACGAAAATCTTTGGCAGTGAAACAAAAAGTACTTGGAAGTAAATCTATAAGAAAGTCGCTGGGAAAGCAGATTCTTCCAAAACTCAAAGCACAAGCCAAATTCGCGCCGAGTGAACCTAAAATAAGGAAACGTCAAGAGGTGGACTACCGATGCGACTGTGGCCAGCTGTTTCACAGCGCCGCACTCCTGTCACGTCACACCACGCTTGCGCACACGCCGCCAAGAATCCGTCGCCGCCGCTCCCCGCCCCCTGAACAAACCACAAAACCACCAAAACCGACACCAAGAAAATCCACATCGAGTGACAAACCTACCATTTCAACAAATTCTAGAAAATCTAGTTTTCGAAGTGACACTAGCACGAATACTAAACCTAAAAGATCGGCGGAGACGAAAAGCGAGGCTAAAACGCCGGAGCGCAAGCGAAAAGCGTCCGTAACGGCGGTGAAATCGACGGCAACTAAAGCGCGAAGAACTCCAGCGCACAGAGGTGTTCCTGTTCCCGACAAAATGAAAAAACTAGTAGAGAAATTGAGGAAGTAA
- Protein Sequence
- MDRLTQLRGEAGGSRDSTLEASSAPSEAYITANDGSSSKFFSLSEDDSTFDLSPLKDVSLASAVEPVKSITEPDDLISNLSPISKKSDLLDSYKIGKQIEAANILSGGVNIFDDNDNSYDGDELVIDDRASVLDDKLNPELKESESELPFQKADDIEGTSVENEAIASKDTEVVLQIDGKNVNAIDIGNGLYLYRKEGEEELAAVQIVDDDQQHPSFKFLKVRENAEGNLEVYEEIEIEVPKEVPTKEGKTAEKNTSHVPLKDINKVISDKNCTKIVERKNTAPFIEPSPALSVNLDTVSETSQVSVTEAKSDSIKNSKMMKYNETKKSPFIHSTPNKEGIPLTKVMVNQQLHPNRHSDNVKTIEVHTDNIKQKGDIKNIKNKEMTETTDAFNEKKEKTVEKCIDMSGNEKFEVTKTKNEKQDTSTCDIIEPKIEHNSVSKKINLVVPFAQKDNETNENKVLKGTDTNEASKVKNITVAKNNQDSLESKNSFEKYYKPTDKSQVDNDKIACIEKDSRVNEKEDKSNEILKDKLIKPIVTSIEKDNKPDKTPIIVNKDNECGLLIEKKESAVVNHESKMNIISGVETKQNEEHSEKVETESVKQVECKSLKMEMVTLASDLKIFDTEKSNVDAKDKNLKENNAITTKELNKNTQCTENKDLSFLDPNKEMDKLNKNDKHKEEHHHKKIVVDQPDQSTKIDEDVKATPLLDTIATKQFAQDAPLPTFNKDKPIHGHSISADIKENLKREKDTDLVLTENNEKSNAHITQVSTNTGSVDSKPEQQFEMFSTYDSLSKEISNHKTSNETSIVLISPPINHKEVEKKEIVAAESFPIPSMKLITPCSNSSNETSTKIEESIKKQHIPIKPMVDNTSKAKVVIQENTEVDNLLKTYPAKVENVALNTVPTSQNMSEIKKDTIKEKAYDKKAINNNSSAVPFGKWTEANRQEFLNKIKETKVPSTSSNANQIKQPNDLNRRDVLQKIDSQRQINSAAGKIDLAAANKLTVKNETKKFTMKPIARPETKIPVKTEALVVNRVTTDSDKHPKQESPPKHFNMPNTTFSVSTSPKSESTVKRTGIYNQDLIDRTIEDIINRAIPGSQQDDKKSNVTKEDKKNSKPKDLPYPRSYQSKEPQPKSSPLDVIEMKMNELHGIPFVERPPHELPKVYNKDIKTYAKQEKIKSPAKKDSKIPNLVPFSSVNQTKVLQEKVIEVDSEEEVIEHEPITGDIGLKKVNNTSKPVVSMGHTTHAVARANTDSKKETIITEKDFDKFARRNSITYENCLTVNFEDREKPNVVHTVKEKDSIIKPLQNEQSLTNTKNKVSPQQLILHQNKHSDKIQLTSKLTPAHEDMHNKNYPSKLQMAYQSALTAKKHTESPITIIEDRPVKVVYMDVQSSFSTNQINVQGKDLSPTKKQLTVAEITTAATCDSLDSDMLETINDVKYQTKSKTKHQRKQVLTPVDIPELELIEPSDLGVEHSPKKKKKIEDKSDKSSKSIVPKKSYLLGRGIADETVPFQHVAKSPLKEPFDQSNAVLTHNATATAIDNLVKAAELLETQAENLNSSAISVGSDSQKSTPAKRGRGRPRKYPLPDGSQDNNKTPTPQKKPRLIDAKKPKVDTVSDDDDSSDEGIIQENWTMGKINENIVCPICNKLFRSENVVFKHVKHCTGPSPNRSESDKRSIRTISGHSQESDSKSSQDSKLDDVDYEPVKTTTKKETPKKRNSKEILESNVDNQKVIVIEDSPALEKSEIGELSQHKSRKRTTKSKLPHFMTNLACETCGKTFRQLSYLVNHKLQHEKDEPKKTETEKTVFTCEICKKEFRKLHHLVQHRLIHNPSSIPSRTSRKSSSEQNVAKEQNVLKQADDQSAAFRCEPCDKSFRKLHHLVEHRETHDGINRQKGSSNASVVIEKSPPPPPECDICKKRFRKLHHLIEHKEQHLETSSEKSDDRSVKSALSTKDIIHECSLCYMVFPNEHSLNKHTIICQRKKRQLAAKQNKAVEKSAEDGTTMPKIDDTPKATEVESNQKNIEEQPDPKAEEVLKAPSQNNDKERPEKVEEAEKVTKSTNENKIEDKQISKENDLKVLESKPLSVKRDSVKCNESNLKTNDVTDTPKKRKVEDEKIKNEVIVIEDTPKKKTPIKDKMALAITKRKKTTNLPTSTIDKDVQIAASSDDEEVRYMLNPNFKVDDTVEGKLFMKVRAKKRNSLQLERPNSKNVVRRTSLQQPPKISRQKPKLVESRISSTINTEPSSSKNKPSKLEPIPSTDSDDSDVKYSFPETALHNVRSRETAQVTKTPKMKRKSLAVKQKVLGSKSIRKSLGKQILPKLKAQAKFAPSEPKIRKRQEVDYRCDCGQLFHSAALLSRHTTLAHTPPRIRRRRSPPPEQTTKPPKPTPRKSTSSDKPTISTNSRKSSFRSDTSTNTKPKRSAETKSEAKTPERKRKASVTAVKSTATKARRTPAHRGVPVPDKMKKLVEKLRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -