Basic Information

Insect: Coleophora deauratella
Gene Symbol: -
Assembly: GCA_958295455.1
Location: OY282399.1:2996359-3001006[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.7e-06 0.0002 22.8 2.7 2 23 255 276 254 276 0.97

2 11 0.00082 0.095 14.4 8.7 1 23 282 305 282 305 0.97

3 11 0.00062 0.072 14.8 0.2 1 23 316 338 316 338 0.98

4 11 0.018 2 10.2 3.1 1 23 345 367 345 367 0.98

5 11 0.12 14 7.6 6.5 1 23 373 395 373 395 0.99

6 11 0.0082 0.94 11.3 1.9 1 23 401 424 401 424 0.96

7 11 0.073 8.4 8.3 0.8 2 23 430 449 429 449 0.96

8 11 2.6e-06 0.00031 22.3 0.4 1 23 455 477 455 477 0.98

9 11 6.5e-05 0.0075 17.9 0.8 1 23 483 505 483 505 0.98

10 11 9.2e-05 0.011 17.4 0.7 1 23 511 534 511 534 0.97

11 11 0.0016 0.19 13.5 0.7 1 20 540 559 540 561 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.7e-06	0.0002	22.8	2.7	2	23	255	276	254	276	0.97
2	11	0.00082	0.095	14.4	8.7	1	23	282	305	282	305	0.97
3	11	0.00062	0.072	14.8	0.2	1	23	316	338	316	338	0.98
4	11	0.018	2	10.2	3.1	1	23	345	367	345	367	0.98
5	11	0.12	14	7.6	6.5	1	23	373	395	373	395	0.99
6	11	0.0082	0.94	11.3	1.9	1	23	401	424	401	424	0.96
7	11	0.073	8.4	8.3	0.8	2	23	430	449	429	449	0.96
8	11	2.6e-06	0.00031	22.3	0.4	1	23	455	477	455	477	0.98
9	11	6.5e-05	0.0075	17.9	0.8	1	23	483	505	483	505	0.98
10	11	9.2e-05	0.011	17.4	0.7	1	23	511	534	511	534	0.97
11	11	0.0016	0.19	13.5	0.7	1	20	540	559	540	561	0.94

Sequence Information

Coding Sequence: ATGGCCAATACAAAGACTAGATTAAACACAACACAGAATGACTCTAAGAAAGGTCTAagtaaaatcaaaaaatcatcCCCAGGATCAGTGGTTACAAGGAAAAATTCAAAGTTGTTAGCCTCCGAGGATAATGTACAGTTGCATAGCAATGACAATATGTCGGCTTGTACAGTCAATGAAAAAATGCCTCCAAATAATCCAATTGATTTGACGATGAAAAGcaatttatttccaataataacaaaaagtaGTAAATTGAAGAAGAGAAAGAGTAATATAGAGTACATGGATAATATACTGAAGAACGAACTGATGATAAATGACAccaaaaagaaaactaaaaacGCAGCTACCAAAAATGCTATTAATAACAATGATAGTCAAATAAGTGACCAAAACACAACTACCAGTATAAAAAACAGCAAAGAAGATTCAGCAGAAACTATcaccaaacaaacaaataaatccaaaagtaaaaaaactctTGAAAGCATGGATCAGGAATTACGAGAAGATGTGTTAAACAAAATGAAAAGTGTACTATCTCCAGGAGACACAAACAATGTTGATGGAACTGATGCAATACCATATGAGTTCCGCAAACCAAAAAAATATCCACCAAAAAAACTGTCATCTTATAAGAAAAAGCCTTCCAAAGAAAGTATGGAAAAGGAAAAAGATTCAGCAAAAGGCGAACCTAAGCCTCCGAAGACTAAGCAAGTTACTCTGAGTAATGGTGTGGTTTTGACATTATCGCTGCTCAAATGCGATTACTGCCACAAGTCATTCAGTAACAAGACTGCTCTAGGGAGGCACATGCTGTCTCACATAGATTTAAGACCGTATCACTGCCGACATTGCTCTAGAAAGTTCCGGTACCAAACAAACTTGAAAGCACATTTGAAAAAGCGTCACGCCGATGCTATTGAAGAAGGACCTGAATTCTATGTATGCAAAGTCTGTGACAAAGTTTTCTTGATGGAGGAAAATTTGAACCTCCACTACGCTACCCATGTGAaatctgaaaataaatttaaatgtttgtACTGCAGTCAAAAGTTTACACACAGGCTGCCTTTAGTAGAGCATGAGAAAACGCATTTGGTCACTGGCCGTTTCAAATGCTACCTCTGTGACATGAGCTATGTATGCAGAAGTCGTCTGACACACCACATTAAAACCCACACCAAAATTAAAGAGTACATCTGTCAATATTGTGGCAAAGAGTTTTTACGTCTAAACTCAATTAAGAGACATGTCCAAGTTTGTCACGGGGGCCACAGGATCCAGTGTCCCATATGTTATAAAGAATTGAAAGGGCACCTCAGTGAGCATATGAGGGTCCACAAGCAGTATCGACCTCATGAGTGCCCCGAGTGTGGACAAAAATTCATACAGGCTACCCAGCTGGCTGTCCACCGTAGATCTCATACAGGTGTCCGTCCGTACCCATGTAGGATTTGTAAACGTCCTTTTGGGCACTCCAACGCTTTAATGCTGCACATCAGAAGACACACTGGGGAGAAGCCATTTGTTTGTGCCATGTGCCCACTAAGTTTCTCCCAACTGCCACACATGAAGACCCATATGATGAAAATACATGGCAAAGAACATTTCTACAAATGCTCAAAATGTGGCGATACCTTCAAGATGAAAAGCGATTTGGTTTCCCATTCTAAGCTCTGTTTGTTGATTGAAATAGAACCAATGTCATTTGAAGAGAAAATCCAGGCTTCAGTCCAAGTGGAAGACGTTGAAGTGGAGTCAGCAATGAGTTTGTCCAAGATGAGGTTTCTCCTAGCGCTCCTACTCACTATGATCGCTACCAAAGATAGACTCAAATTCCTAGGGTTCAATAAGCGTCTCATAGACAATCTTCTAGAAGAATCTCTGGAAGCTATGGGGTATGTACCTTGCAAGGACAACACACTATCCCCTATGAAGCGACTGAAAGCCAACATCGAGATGTTACTAGACGGTACCATCCCCAAAGATCAGATGGATAAGTTTCGGTACGAAAATAAGACCACGGAAGAGATCTTAATGCTTTTGACTGATgagaaaaataatgataatgataagcTTGATAAGTAG
Protein Sequence: MANTKTRLNTTQNDSKKGLSKIKKSSPGSVVTRKNSKLLASEDNVQLHSNDNMSACTVNEKMPPNNPIDLTMKSNLFPIITKSSKLKKRKSNIEYMDNILKNELMINDTKKKTKNAATKNAINNNDSQISDQNTTTSIKNSKEDSAETITKQTNKSKSKKTLESMDQELREDVLNKMKSVLSPGDTNNVDGTDAIPYEFRKPKKYPPKKLSSYKKKPSKESMEKEKDSAKGEPKPPKTKQVTLSNGVVLTLSLLKCDYCHKSFSNKTALGRHMLSHIDLRPYHCRHCSRKFRYQTNLKAHLKKRHADAIEEGPEFYVCKVCDKVFLMEENLNLHYATHVKSENKFKCLYCSQKFTHRLPLVEHEKTHLVTGRFKCYLCDMSYVCRSRLTHHIKTHTKIKEYICQYCGKEFLRLNSIKRHVQVCHGGHRIQCPICYKELKGHLSEHMRVHKQYRPHECPECGQKFIQATQLAVHRRSHTGVRPYPCRICKRPFGHSNALMLHIRRHTGEKPFVCAMCPLSFSQLPHMKTHMMKIHGKEHFYKCSKCGDTFKMKSDLVSHSKLCLLIEIEPMSFEEKIQASVQVEDVEVESAMSLSKMRFLLALLLTMIATKDRLKFLGFNKRLIDNLLEESLEAMGYVPCKDNTLSPMKRLKANIEMLLDGTIPKDQMDKFRYENKTTEEILMLLTDEKNNDNDKLDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -