Basic Information

Insect: Coleophora deauratella
Gene Symbol: rst2
Assembly: GCA_958295455.1
Location: OY282415.1:624741-657322[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.72 83 5.2 0.1 3 20 87 104 85 107 0.91

2 15 0.029 3.3 9.6 2.0 1 23 273 295 273 295 0.98

3 15 0.00012 0.014 17.1 0.4 1 23 301 324 301 324 0.96

4 15 0.034 3.9 9.3 3.1 1 23 329 352 329 352 0.94

5 15 2.7 3.1e+02 3.3 0.1 2 15 528 541 527 544 0.82

6 15 0.00049 0.057 15.1 1.0 2 23 578 599 577 599 0.97

7 15 9.3e-05 0.011 17.4 2.4 1 23 605 627 605 627 0.98

8 15 0.017 1.9 10.3 3.9 1 23 686 708 686 708 0.96

9 15 0.019 2.2 10.1 2.4 1 23 743 765 743 765 0.95

10 15 0.0001 0.012 17.3 2.3 1 23 774 796 774 796 0.97

11 15 0.024 2.8 9.8 4.3 1 23 805 827 805 827 0.98

12 15 0.00054 0.062 15.0 0.9 2 23 875 896 874 896 0.97

13 15 0.00028 0.033 15.9 1.5 1 23 915 937 915 937 0.96

14 15 4.2e-06 0.00049 21.6 0.7 1 23 943 965 943 965 0.97

15 15 3.5e-05 0.004 18.7 3.5 1 23 971 994 971 994 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.72	83	5.2	0.1	3	20	87	104	85	107	0.91
2	15	0.029	3.3	9.6	2.0	1	23	273	295	273	295	0.98
3	15	0.00012	0.014	17.1	0.4	1	23	301	324	301	324	0.96
4	15	0.034	3.9	9.3	3.1	1	23	329	352	329	352	0.94
5	15	2.7	3.1e+02	3.3	0.1	2	15	528	541	527	544	0.82
6	15	0.00049	0.057	15.1	1.0	2	23	578	599	577	599	0.97
7	15	9.3e-05	0.011	17.4	2.4	1	23	605	627	605	627	0.98
8	15	0.017	1.9	10.3	3.9	1	23	686	708	686	708	0.96
9	15	0.019	2.2	10.1	2.4	1	23	743	765	743	765	0.95
10	15	0.0001	0.012	17.3	2.3	1	23	774	796	774	796	0.97
11	15	0.024	2.8	9.8	4.3	1	23	805	827	805	827	0.98
12	15	0.00054	0.062	15.0	0.9	2	23	875	896	874	896	0.97
13	15	0.00028	0.033	15.9	1.5	1	23	915	937	915	937	0.96
14	15	4.2e-06	0.00049	21.6	0.7	1	23	943	965	943	965	0.97
15	15	3.5e-05	0.004	18.7	3.5	1	23	971	994	971	994	0.98

Sequence Information

Coding Sequence: ATGCAAAATTTTGACAACACATCACAAACCGATACGAATAATACTATGGGAACGTACGGTAATCTAAACCCTTGTGAAGTTAGCGAGGAAGTGGCACCGGCAGAAAATATGCATGATCCGGATGAGGTTGAAGATTCAAAGGAGGATTTAAAACCACTTTTAGCTAAGGCTAGGGgGCGGAGAAGAAAAAAGCCACGAGGCAAAGTGAGTAATTACTGGAACAAGAAGATAACTGACGCAAACTTTCCGTTCTACGGCTGTGCTATATGCAACATCAGTTTCACAGCGCTACATGAGCTAGACCAACATGTACCAATCCACAAGGGGCGTTTAACCAGCTATGATTTGAGACTCAAAAACCAACGCAAGAGAAAACTCCTTAAGAAAGagagtaaaaaattaaaaaagctaAGCAAGAAGTTGAAAAAAGAAGACGTTCAGACAACACAtcaatttgaaattgaaatcaagcCGGAAGACGGTTATATCGGCAATGAAAAAGCAACAGAGTACAATGAAAATTGTAAAGATGAAAGCaataatgttgccagtaatttaaatgaaaaacacGTTCAACAAAACGGCAACGCTGTCGAAAAAAAAGATGCcattaatttaaatgaaaaaccCGGTGAAGAAAACGGCAACACTGTTGAAAAGAAAGATAAAGAAATTGCAAGTAGTTTAAATGAAGAAAACAGTGAAGGAAATAGCAAGActgatgtaaaaaaatgtaaagttGGTAAGAGTGAGTCCAAGGAGTATGCAGGCAAAGATGAGAAACTGGGAAAAGACGATCCTCGTCTGGAGAAGCTCTTCAAATGCTTTGCGTGTCAAAAACAGTTCTCTTTGGGCTATTATTTGAAGCTACATGTGAGATCTCATACAGATGAAAAGCCGTATACTTGTGCGCAGTGTGGACAGTCGTTTATAACGGCGAGCAAACTCGGGAGGCACAACAAGAGAATCCATCTCGCTATAAGATACCAGTGTAGGATATGTTATAGGCTGTTTACTAGATTCGAGTACTTAGTCCGTCATTTTGATAAGAAACATGCCGAGCAGAAGTTAGAAGGGGAACCGTATGACTTCAACGCAATCCTACCCTATCTAAAAGAATTAGAGGAACAACTTATGCAAAAGGTTGAAAACAAAGACGTAAAGGAACCTAAACCGGAGACCCAAGATTGGGGCGAAGTGAAACAGGACGGGACCCAGCCGTGGGGAGACGTTAAGCCTGATGACCAAGGTTGGAGACAGGAGATCAAGCAGGACGAGAGTAGCCAGGAGTCGCAGCCACTCGATGTGTACCTGCAGCCCACTATGAAGGTCATTGTGGATGATATAAAGGTGGATATAGAGGTGAAGAAAGAGAAGGAGGATGTGGATTACGAGGATGTGAAGGATGAGAGCTTCCATAATGATGATAATGACAACACTGATGGCTTTGCGAAGACCAACCTTAAGGATGAAAACGTATCAGATGACGAAGACTACTTCCCTTCAAACACCTGGACGGCGCCGGTGGCGGAGCCCCCAGAGCCAGTGAAGCGACCCCTCAGGCGCAAGGACTTCCCGCTGCAATGCGATTTCTGTGATAAGACGATCAGCACTCTGACCTATATGAAGATACTTGGGAAGACTACGTCCCTTAAACACGCGGGCAGCGCCGGTGGCAGAGCCTCCGGAGCCAGTGAAGCGACCCCTCGCGAACGCAAGGACTTCCCGCTGCAATGCGATTTCTGTGATAAGACCATCAGCACTCTGACCTATATGAAGGTACACCTCCGCACTCACACTGGCGAGAGACCGTTCAAGTGTTACGTGTGCGGTCGCGGGTTCATCACATCGAGCAAAATGCACAGACACGTGCTCACTCACGGCGACGTGCCCCCTGAAGAGGAGAAAGTGAAGTCGGAAGCTGTAAAAGACGACCCCGACAAAGCTGACGATGATGAAGAAGTTGTCGAAGGGAAGAAGAAAGGGAGACCCagcaagaagaagaaaaaaggcCTCCAAGCCGTTAAAGCCAAGAGGAAGTACCAGCCCCGGCCGCACGCTTGCCCCTTCTGCAATAAGAGGTTTCTCCACGTAGACACCCTGAGGGTTCACCAGAAGAGTCACGAAgGTGAGACGCGCATTCTCAAATGCAACTTTTGCTTGGAAGAGCAACCCGACGAGGAATCGTTAAAAATGCACGAGGCCACCCACACGGGGCCCAAACCGTTCCTATGCACTATATGCAGTCGAACGTACACGAAGAAAGAGTCCATGGTCTATCACAAGAAGTCACACTACAACGACTCGGAACGTAAAACGTTCGTCTGCGATATCTGTTCCAAAACGTTCAACGAGCAATGCAAGCTGCAGAGACACATAGTGTCCCACAGAACGGACAAGTTCACACTGAGATACGAGTGTCCCGTCTGCGCCCATATGTTCCATACACGGTACCATGTGGAGATGCATCTGTCTACGCACCTTAAGGAGGGGACCATCTCAGAGCACAATCGCAACGAGATCCTGGCGATGGTGCTGCAGAACGCCCGCAAGATCCCCAGGCCGGGGACAGTTTTAGGGGCTCCGCCTCCCGAGATCACCCCTAGCGACGAGCGCTCGACTGTGTGCAATATTTGCGGCGAGGTATTTCAACATTTCTATTTCCTCGAAGAGCATTTAAAAAGTCACGGATCTAAAATAGCCATCGAAGACTTGAACAAGAAGGAGGAAGAGGTGAAGAAACATGTGTGTCCGGTCTGCAATAAGGCCTTCAAGCTGCCTTACTACCTGAAGCTGCATAGCTTCACTCACACCAAGGAAAAACCCTTCATCTGCCAGCAGTGTGGGAAGGGCTTTATTACTAAAGGCAAACTAAAACGCCATCTAGAATCGCATACGGGTCTCAAGAAATACCAGTGCCACATTTGTTACAAGTTCTTCACGAGACCGAGTTATCAAAGAATCCATGTGAGAACTATTCACGGGACGCAGGATTACAATTTTAGATTGGAAGGATTTGGTAAACAATTCGATCTTTATAGTGAGAACAGTAATTAA
Protein Sequence: MQNFDNTSQTDTNNTMGTYGNLNPCEVSEEVAPAENMHDPDEVEDSKEDLKPLLAKARGRRRKKPRGKVSNYWNKKITDANFPFYGCAICNISFTALHELDQHVPIHKGRLTSYDLRLKNQRKRKLLKKESKKLKKLSKKLKKEDVQTTHQFEIEIKPEDGYIGNEKATEYNENCKDESNNVASNLNEKHVQQNGNAVEKKDAINLNEKPGEENGNTVEKKDKEIASSLNEENSEGNSKTDVKKCKVGKSESKEYAGKDEKLGKDDPRLEKLFKCFACQKQFSLGYYLKLHVRSHTDEKPYTCAQCGQSFITASKLGRHNKRIHLAIRYQCRICYRLFTRFEYLVRHFDKKHAEQKLEGEPYDFNAILPYLKELEEQLMQKVENKDVKEPKPETQDWGEVKQDGTQPWGDVKPDDQGWRQEIKQDESSQESQPLDVYLQPTMKVIVDDIKVDIEVKKEKEDVDYEDVKDESFHNDDNDNTDGFAKTNLKDENVSDDEDYFPSNTWTAPVAEPPEPVKRPLRRKDFPLQCDFCDKTISTLTYMKILGKTTSLKHAGSAGGRASGASEATPRERKDFPLQCDFCDKTISTLTYMKVHLRTHTGERPFKCYVCGRGFITSSKMHRHVLTHGDVPPEEEKVKSEAVKDDPDKADDDEEVVEGKKKGRPSKKKKKGLQAVKAKRKYQPRPHACPFCNKRFLHVDTLRVHQKSHEGETRILKCNFCLEEQPDEESLKMHEATHTGPKPFLCTICSRTYTKKESMVYHKKSHYNDSERKTFVCDICSKTFNEQCKLQRHIVSHRTDKFTLRYECPVCAHMFHTRYHVEMHLSTHLKEGTISEHNRNEILAMVLQNARKIPRPGTVLGAPPPEITPSDERSTVCNICGEVFQHFYFLEEHLKSHGSKIAIEDLNKKEEEVKKHVCPVCNKAFKLPYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLESHTGLKKYQCHICYKFFTRPSYQRIHVRTIHGTQDYNFRLEGFGKQFDLYSENSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -