Basic Information

Insect: Coleophora deauratella
Gene Symbol: -
Assembly: GCA_958295455.1
Location: OY282390.1:542695-563055[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 6.1e-06 0.00071 21.1 0.9 1 23 205 227 205 227 0.98

2 28 0.0052 0.6 11.9 1.3 2 19 257 274 256 277 0.93

3 28 3.8e-05 0.0043 18.6 0.3 3 23 313 334 311 334 0.96

4 28 0.015 1.7 10.5 0.2 1 23 397 420 397 420 0.97

5 28 0.0025 0.29 12.9 0.2 1 23 445 467 445 467 0.96

6 28 0.00032 0.037 15.7 4.6 1 23 503 525 503 525 0.97

7 28 0.0013 0.15 13.8 4.2 2 23 567 589 567 589 0.97

8 28 0.0082 0.94 11.3 0.3 1 23 639 665 639 665 0.96

9 28 0.007 0.81 11.5 1.0 1 23 731 753 731 753 0.97

10 28 0.012 1.4 10.7 5.2 2 23 765 786 764 786 0.96

11 28 0.099 11 7.9 0.8 2 23 798 819 797 819 0.96

12 28 0.0038 0.44 12.3 2.2 1 23 829 851 829 851 0.98

13 28 0.05 5.8 8.8 1.8 3 23 887 907 885 907 0.95

14 28 0.0041 0.48 12.2 0.2 1 23 918 940 918 940 0.98

15 28 0.00015 0.017 16.8 0.2 1 23 948 970 948 970 0.98

16 28 0.0095 1.1 11.1 0.0 2 23 990 1012 989 1012 0.97

17 28 0.25 29 6.6 0.3 1 21 1030 1050 1030 1052 0.80

18 28 0.44 51 5.8 5.9 2 23 1092 1114 1091 1114 0.96

19 28 0.0028 0.32 12.8 1.3 1 23 1139 1161 1139 1161 0.97

20 28 0.46 53 5.8 0.3 2 20 1165 1183 1164 1184 0.92

21 28 0.02 2.3 10.0 0.2 2 23 1242 1263 1241 1263 0.94

22 28 0.13 15 7.5 1.8 3 23 1271 1291 1269 1291 0.96

23 28 0.0048 0.56 12.0 0.7 2 23 1302 1324 1301 1324 0.96

24 28 3.6 4.2e+02 3.0 7.1 2 23 1341 1359 1341 1359 0.92

25 28 4.9 5.6e+02 2.5 1.7 2 22 1363 1383 1363 1383 0.89

26 28 0.21 24 6.8 0.5 2 23 1432 1453 1431 1453 0.93

27 28 0.012 1.4 10.7 1.1 2 23 1464 1486 1463 1486 0.96

28 28 2.2 2.5e+02 3.6 4.9 1 21 1523 1543 1523 1544 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	6.1e-06	0.00071	21.1	0.9	1	23	205	227	205	227	0.98
2	28	0.0052	0.6	11.9	1.3	2	19	257	274	256	277	0.93
3	28	3.8e-05	0.0043	18.6	0.3	3	23	313	334	311	334	0.96
4	28	0.015	1.7	10.5	0.2	1	23	397	420	397	420	0.97
5	28	0.0025	0.29	12.9	0.2	1	23	445	467	445	467	0.96
6	28	0.00032	0.037	15.7	4.6	1	23	503	525	503	525	0.97
7	28	0.0013	0.15	13.8	4.2	2	23	567	589	567	589	0.97
8	28	0.0082	0.94	11.3	0.3	1	23	639	665	639	665	0.96
9	28	0.007	0.81	11.5	1.0	1	23	731	753	731	753	0.97
10	28	0.012	1.4	10.7	5.2	2	23	765	786	764	786	0.96
11	28	0.099	11	7.9	0.8	2	23	798	819	797	819	0.96
12	28	0.0038	0.44	12.3	2.2	1	23	829	851	829	851	0.98
13	28	0.05	5.8	8.8	1.8	3	23	887	907	885	907	0.95
14	28	0.0041	0.48	12.2	0.2	1	23	918	940	918	940	0.98
15	28	0.00015	0.017	16.8	0.2	1	23	948	970	948	970	0.98
16	28	0.0095	1.1	11.1	0.0	2	23	990	1012	989	1012	0.97
17	28	0.25	29	6.6	0.3	1	21	1030	1050	1030	1052	0.80
18	28	0.44	51	5.8	5.9	2	23	1092	1114	1091	1114	0.96
19	28	0.0028	0.32	12.8	1.3	1	23	1139	1161	1139	1161	0.97
20	28	0.46	53	5.8	0.3	2	20	1165	1183	1164	1184	0.92
21	28	0.02	2.3	10.0	0.2	2	23	1242	1263	1241	1263	0.94
22	28	0.13	15	7.5	1.8	3	23	1271	1291	1269	1291	0.96
23	28	0.0048	0.56	12.0	0.7	2	23	1302	1324	1301	1324	0.96
24	28	3.6	4.2e+02	3.0	7.1	2	23	1341	1359	1341	1359	0.92
25	28	4.9	5.6e+02	2.5	1.7	2	22	1363	1383	1363	1383	0.89
26	28	0.21	24	6.8	0.5	2	23	1432	1453	1431	1453	0.93
27	28	0.012	1.4	10.7	1.1	2	23	1464	1486	1463	1486	0.96
28	28	2.2	2.5e+02	3.6	4.9	1	21	1523	1543	1523	1544	0.93

Sequence Information

Coding Sequence: ATGGCTCTCAAACTTGGAAAATGCAGGCTTTGCCTGAAGCTCGGAGACTTTTACTCAATCTTCACGATGGATAACACACTGCAGCTCTCCGAGATGGTGATGGAATGCGCTCGAGTGAAGATATACGAAGGAGATGGGCTACCTGACAAAATATGCTCCGAGTGTGTCCAGAAACTCAGCAGTGCGTACATCTTCAAGCAGCAATGCGAAAGATCTGACCAAGAGCTGCGCCGCAACCATATTCCCCCACCAGGCTTCAGcatcacgccgccgccgccgaacCGACAGAGCAGCGACTCTGCCTTCTCGTCTTCTCATACAGACATTTCCTCCCATCAAACTAAGATGTCCTCCTCAACCGAGAAGGTGCGCCCCGGAAGCCGCTCGCGCAAGCGCAGCCGGGAGAGCGTCGGCGAAGCGTCCCTCGGCAGCCAGCGCTCCGAGTATCGCccctccgccgccgccggcaagcGCGTCGACGAGCTGCGCAGCAAGGCCAAGAAACCACGGGTGCACTCCCCCGCCGACACCTACACGGACTCCGACTACGAGGACAACGGCATGTCACACTTCTCCGCCGAGTCCGACTCCGACGAACCGCTCGTCAATGCGTTCAGGTGCAAGAAGTGCCCCAAAGAATTCAAATCCGTCAAGAGCTTGGCCGCTCATATGAAAGTCCATTCGAGAGACAAGGACAAGAGTCTGGGCGAAGACCAAGTCGTCGAAATTCCAAAGAATAATGATGCATCGGATGTCGAAGATATGCTAAAGTGCGAGAAATGTCACAGGACGTTTAAGCTGCAGATAATGCTCAAGCGCCACTCGGAGTCGTGCGGCAAGGCGCCGACGCCGCAGCCGTCGCCGCAGAAGGAGCTGCTCATCACGCTGGAGCCCATCGACAAGGTTCTCAAGCAGAACGACGGCAAGAAGATCGACTGCGAGATGTGCACGACCAAATTCAAGACCATAGAGAACTTGGAGAAGCACATGCGAGTGGTGCACGCGGCCGTCCTCAAGAAGAGCAAGAAAGAGACTGCGGCCGagagcgccgccgccgccgagtcCGCCGAGTCCGCCGAGTCCGGGGTCATGTCCATCCCCTGCCTGTACTGCTCCACCCCGTTCGAGGACTACTACGTGCACAACGCGCACTTCCACGCGTGCCCGGCGCGCGACGACTCGCTGCCGTACCAGTGCCCGCTGTGCGACCGCGTGATGGCCAAGAAGGCGTCCTACTTCCTGCACATCAAGAACATCCACTTCTGGCCGCGCACCCCCGCcaagccgccgccgccgcgccccaaGCCGGAGAAGCCCAAGCCCGAGCAGGAGTTCGAGTGTAGAATGTGCAACAAGAAGCTGCCCTCGCAGGATTCGCTCATCACGCATTTGGCCGCGCACATGTCCAACCTGGAGGACGGCGACGACAACGAGTCCAGATCGAGCACTCCTATCGACGCTGCCTCCGTACATTCCAGCACTAGCGCACCGGAATCGAGTAACATGCACAAGTGTAAATTCTGCGACAAAGCCTTCAAATACAAAAAGGCTCTCCAGACCCATACACTTTTACACACGTACGGGGGTTTAGAAATAAAGGCGGAGCCGCCCGACAAGGCGTCCACTAGTCTAGAGGAGTTCCCCGAGTCGGAGGGGGAGTCGAGCGAGGGGGAGGGCGAGGGGGCGGACGACGACAACACGTGCGACATCTGCGAGAAGCAGTTCTCGTACAAGCGGCTGCTGCTGCACCACAAGCGCACCAAGCACAACATGAGCTCGGGCCACAAGCGCGCCAAGATCAACCTGAAGGACTGCCCCGTGCGCTGCCTCATCTGCGACATCGAGATGAAGGTGGCGGACATAAACGAGCACAACCAGACGCACATCGCCAAGAACATGAAGCCGCGCAACCAGTACCAATGCGCGGAGTGCGGCGAGCGCGGCGAGCGGTTTAAAAGCTGCAGCGCGTTGGCCACGCACATCAAGCTGGTGCACCGCCTCAAGCAGGTGGCTCCAGCCCCCCAGCAGGGGGCGTCCGCCCCCAGGCAGCAGTTGCAGTTCGAGGGCGCGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACCAAGACGGAACCCCTGGACGAGATCCAGAGTCACAACGACTTTGGTGAGGTTCCGGTGACGGGCACGGCGACGGTGGACCTGGCGGGCTTCTCGTGCCACGTGTGCGGCAAGAAGATGCCCACGCTGCTGTCGCTGCGCCGCCACGTCAACTGGCACCTGAACGTGGGCAACAACATCGAGAAACTCATCGAGTGCTTCGTCTGCAAGGAGACGTTCCGGTTCCAGTGCCACTACAAGCTGCACATGCGCGCGCACTACCGCGACCCGGCGCTGGACGCGGCGCACCTCACGTGCCCCGTGTGCCAGCGCCGCAGCAAGCACCTGCGCGCCGCCCTCGCACACATGAACTACCACAAGCAGACGCGCTTCCAGACGGCGGACTACCAGTGCTCGATCTGCAAGCGCGTGTTCCAGCACCGGAAAGTGTATCTATCGCACATGGCCATCCACTACAAGCGCGGCGAGGGCACGGACGCGGTGGCGGGCgcggggggggcgggggggcaGGCGGGCGCGGGGGGGCAGGCGGGCCCGGGGCAGCAGGACCCGCTCGCGTGCCCGCAGTGCGGCAAGGTGTGCGACTCGGAGAACTCGCTCAAGTGCCACGTGCGCTGGCACACGTCCAAGTCGTCCCTGTACGGCGCGCGCTACGAGTGCGGCGTGTGCGCGCTCGTGTTCACCAACAAGCGGCGGCTGGAGCTGCACACGCGCGCGCACTACGAGGCGCCCGACGGGCCCTACAAGTGCGGCGTGTGCGGCAAGGGCTACATCGACGAGGACTACTACCGCCGCCACGTGAAGGGCCACAACTTCGACAACACGAGCCACCGCAGGCGCCTGGAGAAGCTGCGTCGCAACAAGGTCAAGTGCCCCATCTGCCCGCGCTACTACCCCGATCTGGCGAAGCTGATCGGCCATCTGAAGCGGACGCACCCGGAGAGCAAGATGGTGAAGACGGACCCCGACGCGCCCCCGCCGGACGTCTTCCGCTGCAAGTTGTGCAACAAGGTGTTTCTGGAGGAGCGACGCCTGAAAGCGCACGAGGCGGCGCACACGCGCAAGCCCACGCACTACGGCTGCCGCTACTGCGGCCACAAGACGCCCTCCATGAAGCACCACAACGTGCACGTGAAGCGCCATCTCTACGTGAAGCACCACGAGCGGCCGCTGCAGTGCCGCCACTGCGAGGAGACCTTCCTGCGCCACTGCGACCTCAACCAGCATCTGCAGACCGCCCACGACGTCACAGAGAACACGTGGATCGAGCAGACCGTGCCGACGCCCGCGCGGCGCAAGGGGCCCCTCAAGGAATTCCAGTGCGAGATCTGTCACAAGCTGCTCGCCAGCCGCGGCAACTTCGAGCGCCACCTCGACTACCACAACTCGCTGCGCTGCAACTACTGCTTCGAGTACTTCAGCAGTCTGAAGTTCCTCGAGGGCCACTTAGCCTTCAGCTGCGAGAAGAAGAACCTCATCGGCGACACGGAGCCGCACCCCAAGCGGGTCAAGTGCCACGTCTGCTACAAGCCGTTCCATCTGCAGGTCAAGCTGGACTGCCACCTGCGGACGCAGCACGACGTGCGCGTCACGAAGGAGTCCTCGCAGGGCAAGCGGGATATAGTGTGCGACTACTGCTTCAAGGTGTTCGAGAATGACTACGCGCTGAGCATGCACAAGATCTACCATCGCACCATCGGCTACTACGGCTGCCGCTACTGCGCGCGCAAGTTCAATACGCTCACGCTGTATCGCAAGCACAAAAATGCGCATTACGCGCAGATGAACGTGGACAACCCCACCAAGTGCGACCACTGCGACGAGACGTTCGTCGCTTTCCGCGAGATGATCACGCACATGCGAGAGGCCCACGGCGACGACAAGGAGTGGATCGTGCTGCCCAAGGAGTCCATCGAGGAGCAGTGCCACATCTGCAAGAAGACGTTCTTCAATCTACATCGGCACCTTAGCTACCACGAGGAAAACCGGTGCAAAAAGTGCGGCGAATACTTCCTGTCGCGCGTGGACTTCGACCAGCATCTGTGCACCGTGGAGAGCGACGAAGAAGACGACGGCGGCGACAGCGGCCGGCCCGAGCGACCCAAATACGAGGAGTGCCCCTTCTGCTTCAAACCCATCACGCACAACACGAAGAAGAAGCACGAGCAAATACACAAAACGTCCGGCGCCATTTCCTGCCGCTTCTGTCCGCTAAAATTCAAGACCATGGACGCGTTTAACATCCACGCGTTTTCGCACCGCAGCCGCAAATACACCGTCAAGCCGATCAAGTGCCGCGTGTGCCGGGAGAAGTTCACCAAGTACGGACCCTTCATGAAGCATATGAAGAGCGCGCACCAGTCGACCAAGAAGGTGCATTATCGTGCCGTCATCAGAGCCGAGCGTTGCGTGGTCTGCGGGGCTTTCCATCCTAATCTACACAACCACTACCGCCATCATCTGCAGCACCAGTGCCAGACCTGCCGCAAGTATTTCACCTCCAGCCGCGTCTTCGGCCGGCATCAGTGCGACAAGGAGGACGCCGACCCCTCCAAGGTGTTCACCAGCGACGAGAACCTCGATGCTCTCATCAAGTCCTACATCCCTAAGGACGAGAAGGACGACGAGAAATTCTACGGCTACACCGACGATGAGGACGACGACGAGCCGGAACCGGAGCCCGAGGCGGAAGCGGCCGCGCCGAGCAACCACACCGCGAATAGTGAGACCGTTCAAAACGGCCACGAAACGAACAAGAACCCTCCGGCGGAGAGCCTAGTGATGCAGCCGTTCATAATATCGGACGTGCTTTCGCTGTACGAGAAGAAGGCGGAGCTTCTAGCGCTGTACCAGAAGAAGGGCACGCGGGAGAGCCAGACGGCCGccaagaaaaaggagaaggccAAAGCCAAAGCGGCGAAGCAGAAAGAGAAGAAGGAGGCGGAGAAAAAGAAGGCGGCGGAGAAGAAAGCGGACGACACTGACAGCGACGTGGAGATCGTGGCGCTGTCGGACGAGGAGCCCGCGCCCTGCCCCGTCATCACCCTCGATGACGACTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNTLQLSEMVMECARVKIYEGDGLPDKICSECVQKLSSAYIFKQQCERSDQELRRNHIPPPGFSITPPPPNRQSSDSAFSSSHTDISSHQTKMSSSTEKVRPGSRSRKRSRESVGEASLGSQRSEYRPSAAAGKRVDELRSKAKKPRVHSPADTYTDSDYEDNGMSHFSAESDSDEPLVNAFRCKKCPKEFKSVKSLAAHMKVHSRDKDKSLGEDQVVEIPKNNDASDVEDMLKCEKCHRTFKLQIMLKRHSESCGKAPTPQPSPQKELLITLEPIDKVLKQNDGKKIDCEMCTTKFKTIENLEKHMRVVHAAVLKKSKKETAAESAAAAESAESAESGVMSIPCLYCSTPFEDYYVHNAHFHACPARDDSLPYQCPLCDRVMAKKASYFLHIKNIHFWPRTPAKPPPPRPKPEKPKPEQEFECRMCNKKLPSQDSLITHLAAHMSNLEDGDDNESRSSTPIDAASVHSSTSAPESSNMHKCKFCDKAFKYKKALQTHTLLHTYGGLEIKAEPPDKASTSLEEFPESEGESSEGEGEGADDDNTCDICEKQFSYKRLLLHHKRTKHNMSSGHKRAKINLKDCPVRCLICDIEMKVADINEHNQTHIAKNMKPRNQYQCAECGERGERFKSCSALATHIKLVHRLKQVAPAPQQGASAPRQQLQFEGADLADFCEVVVTKTEPLDEIQSHNDFGEVPVTGTATVDLAGFSCHVCGKKMPTLLSLRRHVNWHLNVGNNIEKLIECFVCKETFRFQCHYKLHMRAHYRDPALDAAHLTCPVCQRRSKHLRAALAHMNYHKQTRFQTADYQCSICKRVFQHRKVYLSHMAIHYKRGEGTDAVAGAGGAGGQAGAGGQAGPGQQDPLACPQCGKVCDSENSLKCHVRWHTSKSSLYGARYECGVCALVFTNKRRLELHTRAHYEAPDGPYKCGVCGKGYIDEDYYRRHVKGHNFDNTSHRRRLEKLRRNKVKCPICPRYYPDLAKLIGHLKRTHPESKMVKTDPDAPPPDVFRCKLCNKVFLEERRLKAHEAAHTRKPTHYGCRYCGHKTPSMKHHNVHVKRHLYVKHHERPLQCRHCEETFLRHCDLNQHLQTAHDVTENTWIEQTVPTPARRKGPLKEFQCEICHKLLASRGNFERHLDYHNSLRCNYCFEYFSSLKFLEGHLAFSCEKKNLIGDTEPHPKRVKCHVCYKPFHLQVKLDCHLRTQHDVRVTKESSQGKRDIVCDYCFKVFENDYALSMHKIYHRTIGYYGCRYCARKFNTLTLYRKHKNAHYAQMNVDNPTKCDHCDETFVAFREMITHMREAHGDDKEWIVLPKESIEEQCHICKKTFFNLHRHLSYHEENRCKKCGEYFLSRVDFDQHLCTVESDEEDDGGDSGRPERPKYEECPFCFKPITHNTKKKHEQIHKTSGAISCRFCPLKFKTMDAFNIHAFSHRSRKYTVKPIKCRVCREKFTKYGPFMKHMKSAHQSTKKVHYRAVIRAERCVVCGAFHPNLHNHYRHHLQHQCQTCRKYFTSSRVFGRHQCDKEDADPSKVFTSDENLDALIKSYIPKDEKDDEKFYGYTDDEDDDEPEPEPEAEAAAPSNHTANSETVQNGHETNKNPPAESLVMQPFIISDVLSLYEKKAELLALYQKKGTRESQTAAKKKEKAKAKAAKQKEKKEAEKKKAAEKKADDTDSDVEIVALSDEEPAPCPVITLDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -