Basic Information

Insect: Coleophora deauratella
Gene Symbol: -
Assembly: GCA_958295455.1
Location: OY282396.1:13361168-13368759[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0006 0.07 14.8 2.5 1 23 176 199 176 199 0.97

2 12 0.22 25 6.8 0.4 3 23 208 228 207 228 0.93

3 12 0.00033 0.038 15.7 0.7 2 23 235 256 234 256 0.97

4 12 4.2e-06 0.00049 21.6 0.1 1 23 262 284 262 284 0.98

5 12 4.9e-05 0.0057 18.3 1.3 1 23 293 315 293 315 0.96

6 12 3.1e-06 0.00036 22.0 1.0 2 23 322 343 321 343 0.96

7 12 0.00088 0.1 14.3 8.3 1 23 349 371 349 371 0.99

8 12 2.9e-09 3.4e-07 31.6 0.6 1 23 377 399 377 399 0.99

9 12 1.5e-06 0.00017 23.0 1.2 1 23 405 427 405 427 0.99

10 12 9.3e-05 0.011 17.4 0.2 1 23 433 454 433 454 0.96

11 12 0.00012 0.013 17.1 0.3 1 23 460 482 460 482 0.96

12 12 0.00016 0.018 16.7 0.3 1 23 488 510 488 510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0006	0.07	14.8	2.5	1	23	176	199	176	199	0.97
2	12	0.22	25	6.8	0.4	3	23	208	228	207	228	0.93
3	12	0.00033	0.038	15.7	0.7	2	23	235	256	234	256	0.97
4	12	4.2e-06	0.00049	21.6	0.1	1	23	262	284	262	284	0.98
5	12	4.9e-05	0.0057	18.3	1.3	1	23	293	315	293	315	0.96
6	12	3.1e-06	0.00036	22.0	1.0	2	23	322	343	321	343	0.96
7	12	0.00088	0.1	14.3	8.3	1	23	349	371	349	371	0.99
8	12	2.9e-09	3.4e-07	31.6	0.6	1	23	377	399	377	399	0.99
9	12	1.5e-06	0.00017	23.0	1.2	1	23	405	427	405	427	0.99
10	12	9.3e-05	0.011	17.4	0.2	1	23	433	454	433	454	0.96
11	12	0.00012	0.013	17.1	0.3	1	23	460	482	460	482	0.96
12	12	0.00016	0.018	16.7	0.3	1	23	488	510	488	510	0.98

Sequence Information

Coding Sequence: ATGAGCAGCACAAACGATTGCATCGAAGTGGAGCTTCCTTACGACCTTATAAAATACCTGGGTTCTGAAGACTGTGACGTGCAGCAGATGTGTCGGATATGCTTCTCTGTAAAGAAGGAGGCCCTATGCTCCTTTTATCAGAGGAAGGACGGGGTGAAGCTATCTGAAATGTTTACATCGTTAACCGACATTCAGATTCGAGAAGATGATGGCCTGCCATCTAATCTTTGTCGGGGCTGCCAGGCCCAAGTAACTAATTGCTACAGATTTAAGACAAAATGTTCAAAGTCTGATCGCACATTGAGGTCAATTCTGAAAGGAGAATTCAGTTCTGATACTTGGAATCCACACGTGAAAAATAAACATGAGAAAGAAGATCATAATGCTATAATAAAGACAGAGCACCATATCAAATTTGAGGAGGAAGAATATTTGGATGAGGAAGAATCGTCAGATACAACCAAAGATTTTACAAATGAAGATAATAACATAACTGTTGGAAAACCAAAGAAAAAATTTAAATCTCACGTTTGTGATTTTTGTTCTAAGaaATATACCAACATGCAGGCTTTGAAAGCACACATTAAACGAACACATAAATCTTCGAAACACCCAAATGCATGCAAAAAGTGCAAGGATTCGTTTGAATCGATAGATGACTTGAGACTGCACACTGTGTTGCACGAACCTGGACCGGTTTGGCAGTGTTTGGTGTGTAAGAAAGAATTTTCAGGCCGACCGATGTTCCGCCGACACATCCAGCGGCACATGCAGGTGAAGCGATACGCGTGCGCTGTCTGCGGGAAACCGTTCACGGAGTTGTACGCTCTGCGGCGGCACACTCGCGTGCACACCGGCGAGCAGGTGGACAAGCGGCACGCTTGCACGCAGTGCGACAAGAGGTACGTCAACATGGCACAACTAAATAACCACATGCTGAGCCACACCGGCGCGCGGCCCTGCGTCTGTGCGGAGTGCGGGAAGAGTTTTCCCTCCCAGCGTCTTCTCAATAGCCATCAGCTGACCCACTCCGACATCAAGCCGTACGAGTGCCGATATTGCGATAAGAGGTTCCGTCACGAATCGACGCGGAACACGCACCACCGTACACACACGGGTGAGAAGCCCTACACCTGCACCGTTTGCGGCAAGAGCTTCATACAGAACTCCAACCTTACGCTGCATATGAGGGTTCACACAGGTGAAAAGCCGTACACGTGCGAAACGTGCGGCCGCAAGTTCTCTTCGGGCTCCACGCTCAAGATGCACATACGCAGCCACACGGGCGAGCGGCCCTACGCGTGCGACATCTGCGGGAAACAGTTTGCGCGCAAGGACCTGCGCGCGCACGTGCGCACGCACACAGGGGAGCGCGCGCACGCGTGCGAGGTGTGCGGCCGCCGGTTCGCGCGCCTGCCGTTACTTCGCGACCACAGCCGCATTCATACCGgTGAAAAGCCATTCGAATGTGAAGAATGCACACAAAAATTCCCAACGAGAGCGCGACTCGCGAAGCACGTGAAAGTTCaccaaataaagaaaaagaaaaccaaGCCCAGAGTTGTCAAAAACATTGTTGCGATCCCCTTTTCTGAAGGAATTAACTTAAAACTGGATAAAACGCAACAAACCAGCGTTTCTAATCAAGATTTACTTACAAATGATGTTGTTAGCAATGATTCAAATACGGAAGTTATAGTGGAAAACGAAGTGAATTTAGAAGGTGATGAGCTGGTATTACCGGATGATGGCGAACTCAGATCTGATCTTTTAGTCATTGATGACAATCAAGTCGCTTACCAAGATACACTGTGTTTAAGCAGTGATGGAGTTATAGTTAAAAATGAAGATAACCTAAGGTATGGTAATAACATGAATTTAGTTACTGTGAATGAAGGGGAAGTGAGCATTTCGTCCGCAAGTGCGATGATGGAGGGAGCTACAGTGAAATTGTATCAAGTAGACCAAAGTTTGGTGCAAATGCAGATTCAAAGCCTAGGTGGGCAAGTCACTATCAGTAAGATTACTAGAAAAATGACTACCAACTTTTAA
Protein Sequence: MSSTNDCIEVELPYDLIKYLGSEDCDVQQMCRICFSVKKEALCSFYQRKDGVKLSEMFTSLTDIQIREDDGLPSNLCRGCQAQVTNCYRFKTKCSKSDRTLRSILKGEFSSDTWNPHVKNKHEKEDHNAIIKTEHHIKFEEEEYLDEEESSDTTKDFTNEDNNITVGKPKKKFKSHVCDFCSKKYTNMQALKAHIKRTHKSSKHPNACKKCKDSFESIDDLRLHTVLHEPGPVWQCLVCKKEFSGRPMFRRHIQRHMQVKRYACAVCGKPFTELYALRRHTRVHTGEQVDKRHACTQCDKRYVNMAQLNNHMLSHTGARPCVCAECGKSFPSQRLLNSHQLTHSDIKPYECRYCDKRFRHESTRNTHHRTHTGEKPYTCTVCGKSFIQNSNLTLHMRVHTGEKPYTCETCGRKFSSGSTLKMHIRSHTGERPYACDICGKQFARKDLRAHVRTHTGERAHACEVCGRRFARLPLLRDHSRIHTGEKPFECEECTQKFPTRARLAKHVKVHQIKKKKTKPRVVKNIVAIPFSEGINLKLDKTQQTSVSNQDLLTNDVVSNDSNTEVIVENEVNLEGDELVLPDDGELRSDLLVIDDNQVAYQDTLCLSSDGVIVKNEDNLRYGNNMNLVTVNEGEVSISSASAMMEGATVKLYQVDQSLVQMQIQSLGGQVTISKITRKMTTNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -