Cdea029015.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coleophora deauratella
Gene Symbol
-
Assembly
GCA_958295455.1
Location
OY282406.1:7635176-7651057[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.00012 0.014 17.1 0.1 3 23 129 149 128 149 0.97
2 18 1.1e-06 0.00012 23.5 1.2 1 23 155 177 155 177 0.99
3 18 6.7e-06 0.00078 21.0 2.7 1 23 183 205 183 205 0.99
4 18 1.3e-06 0.00015 23.3 2.3 1 23 220 242 220 242 0.98
5 18 6.1e-05 0.0071 18.0 3.1 1 23 257 279 257 279 0.98
6 18 4.3e-07 4.9e-05 24.7 1.5 1 23 294 316 294 316 0.99
7 18 0.00019 0.022 16.4 2.8 1 23 322 344 322 344 0.98
8 18 2.6e-05 0.003 19.1 0.2 1 23 351 373 351 373 0.99
9 18 1.3e-05 0.0015 20.0 2.1 1 23 379 401 379 401 0.99
10 18 0.043 5 9.0 1.8 1 23 408 430 408 430 0.98
11 18 7.2e-07 8.4e-05 24.0 2.3 1 23 436 458 436 458 0.99
12 18 0.18 21 7.0 1.8 1 23 465 487 465 487 0.98
13 18 3e-06 0.00034 22.1 1.5 1 23 493 515 493 515 0.99
14 18 0.00056 0.065 14.9 0.7 1 23 522 544 522 544 0.99
15 18 3.3e-06 0.00038 22.0 1.9 1 23 550 572 550 572 0.98
16 18 0.0024 0.28 13.0 0.3 1 20 578 597 578 600 0.93
17 18 4.6e-05 0.0053 18.3 1.4 2 23 607 628 606 628 0.96
18 18 4.2e-06 0.00049 21.6 1.4 1 23 634 657 634 657 0.97

Sequence Information

Coding Sequence
ATGTTCGAGCAGCAAATCAAAGCCGAGCCCATGAGCTTCTACACGCCCCACCCCCACGTCCACTCTGGCCCGCCCACCATAGTGCGATCAGACTCCAGCCACCCCATCATCAATATGCACCACCAGCATCAGGAGGACTCCAAGGACAGCCTGATAGCGCAGCAGCAACACCACCAGCAGGAGATGATGGAGCATCAGCAACAAGAGATGCAGCAACAGGATGATGAGCTAAGCTTCAAAGGCATGGAAGATGAAGGTGTTGAAATGGACATGGACGGGCGCCAATGTTCTCagGGTATGGGTGTGGATATGGGATCAGTTCAAACTAAAATGGAGGTGGCGAATGGGGGTGGGCAGTCAACTCCGCGATCAAAACCGCAGGCCTGTAAGGTTTGTGGCAaagtgctgtcatccgcatcaTCATATTATGTCCATATGAAGCTTCATTCTGGCAACAAACCTTTCCAGTGCACGGTTTGCGACGCAGCGTTCTGCCGCAAGCCGTACCTGGAAGTGCATATGCGCACGCACACAGGCGAGCGGCCCTTCCAGTGCGACCTCTGCCTCAAGCGGTTCACGCAGAAGTCCAGCCTCAACACACACAAACGCGTGCACACGGATGAGCACATGCAGGCGTTGATGGTGAAGGACCGCCCCTACAAGTGTGACATCTGTCAGATGCGGTTCACGCAGAGCTCCAGCCTCAATCGCCACAAGAAAATACACACGGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTGCGGCCGTACCAGTGCCACATCTGTTTTATGCGCTTCACCCAGAAGTCCAGCCTGGGCCGACACGGCAAGATACATACTGAGGAGCACATCCAATCGCTGATCAACAAAGTGCGCCCCTATCAATGCGACATCTGTGACAAGCGCTTCACCCAGAAGTCCAGCCTGGGCACTCATAAGCGTATACACACCGGGGAGCGGCCGTTCCAGTGCACCGTCTGCCTCAAGTCCTTCACGCAGAAGTGCGCGCTCAATTTACACGAAAAGATACATACGGTGCAAGGGCGACCTTTCACGTGCGGGCAATGCCCGGCCGCGTTCACTCGCCGCCCCTACCTGGACATTCACATGCGCACGCACACAGGCGAGCGGCCGTATCAGTGCGACGCGTGCCTCAAGCGCTTCACGCAGAAGTCCAGCCTCAATATACATAAGCGGACGCACACAGTCCAGGGCAGACCGTTCCAGTGCCTGTCCTGTCCCGCCGCCTTCACCTGCAAGCAATACCTGGAGATacacacgcgcacgcacaccgGCGAGCGCCCGTATCAGTGCGACATCTGCCTCAAACGCTTCACCCAGAAATCCAGTCTCAACATCCACAAACGGACGCACTCAGTACAAGGGCGGCCGTTCCAGTGCCTCTCGTGTCCGGCCGCGTTCACCTGCAAGCAGTACCTGGAGATCCACAACCGCACGCACACGGGCGAGCGGCCTTACCAGTGCGACGTGTGCCTCAAGCGGTTCGCACAGAAGTCCACGCTCAACATTCATAAGAGAACTCACACAGTGCAAGGGCGGCCGTACCAATGCATGGAGTGCCCGGCCGCGTTCACCTGCAAGCCGTACCTCGAGATCCACATGCGCACGCACACGGGCGAGCGGCCCTTCGAGTGCGACGTCTGTTACAAACGGTTCACGCAGAAATCCACACTCAACATACACAAGCGAATACACACCGGGGAACGTCCATATGCTTGCGACATTTGTCAGAAGCGTTTCGCTGTGAAGAGCTACGTTACTGCGCACAGATGGTCGCACGTGGCGGACAAGCCGCTGAACTGCGACCGGTGCTCGATGACGTTCACCTCCAAGTCGCAGTTCGCGCTGCACATCCGCACGCACACCTCCGGCTCCTGCTACGAGTGCAGCGTCTGCGGCCGCACCTTCGTCCGGGACAGCTACCTTATACGACATCACAACCGCGTGCACCGTGAGAACCACAGCAATGTGTCCGCCAATAGCATCGGCGCCGTCTCCAGCGTCGCCACCAacaccgccgccggcgccggctaCGACTCCTCCGTGTGTGACCTCAGCATCGGCGCCGTCTCTAGTGTCGCCACCAACACCGCCGCCGGATACATCTCCTCCGTGTGTGACCTCAGGTACGTCACGGCAAGGTCAACGCGTCCGCCAATAGCATCGGCGCCGTCTCTAGTGTCGCCACCAACACCGCCGCCGGATACATCTCCTCTGTGTGTGACCTCAGGTACGTCACGGCAAGGTCAACGCGTACGTCACGGCAAGGTCAACGCGTCCGCCAATAGCATCGGCGCCGTCTCTAGTGTCGCCACCAACACCGCCGCCGGATACATCTCCTCCGTGTGTGATCTCACGTACGTCACGGCAAGGTCAACGCGTCCGCCAATAGCATCGGCGCCGTCTCTAGTGTCGCCACCAACACCGCCGCCGGATACATCTCCTCCGTGTGTGACCTCAGATACGTCACGGCAAGGTCAACGCGTCCGCCAATAG
Protein Sequence
MFEQQIKAEPMSFYTPHPHVHSGPPTIVRSDSSHPIINMHHQHQEDSKDSLIAQQQHHQQEMMEHQQQEMQQQDDELSFKGMEDEGVEMDMDGRQCSQGMGVDMGSVQTKMEVANGGGQSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMQALMVKDRPYKCDICQMRFTQSSSLNRHKKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDICDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPFTCGQCPAAFTRRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHTRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLSCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTVQGRPYQCMECPAAFTCKPYLEIHMRTHTGERPFECDVCYKRFTQKSTLNIHKRIHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHTSGSCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGAVSSVATNTAAGAGYDSSVCDLSIGAVSSVATNTAAGYISSVCDLRYVTARSTRPPIASAPSLVSPPTPPPDTSPLCVTSGTSRQGQRVRHGKVNASANSIGAVSSVATNTAAGYISSVCDLTYVTARSTRPPIASAPSLVSPPTPPPDTSPPCVTSDTSRQGQRVRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00824939;
90% Identity
-
80% Identity
-