Cdea000346.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coleophora deauratella
Gene Symbol
Jarid2
Assembly
GCA_958295455.1
Location
OY282387.1:5364633-5380422[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-14 2.3e-10 42.0 0.0 6 89 525 602 522 602 0.91

Sequence Information

Coding Sequence
ATGAAAAGCCGGAAGGTGCAAGCGCAGCGCAAGTTTGCGCAAGGCGCGTACATACCGCCTAACCACAATAATAACCTGCCTGTGAGGGTTGATCACAATGTGACTCCCACCAAAGAAGATCGCAGCATAATACACCACAATTTAGCAGCAAAAAATCTGCTTGACATTGTGTCTTTCCAGAgCATGCACCCACATGCTGAGCCTAGGGTTCTCCTTCAAAGATTATCCAACAAAGAGACACAGGCTCAGAATGGCCACCCTCCATCACCTTCCGGGCCTGACGAACCAGTAACCACACCATCGACCCAAGCCTCTCCAACAGAACCACCGCCGGTAAAAAAGGCTGCACATGAAAAACACAAAAAGGAAGCTAAAATTGTGTTAAAGAAAAAGGTCACATTTGCGCCCCACACAAGAATTCCATACAGAACTAGAGGGGCTACCAATCACCAATTGTTAGCGAAACGGCGCAGCCCAGCACAAGTCAGACCTACCCGCAAGAGAATACTAGAGAGACAAGGCTCCTCATCAGACTTCGATGATGAGACACCACTGAGTCTCGCCaaacttaaaaaagaaaatcaaatacAAAGTAAAGAAACGAACATGTTTACAGATAAGGACACGAAAATTGTGTCTTCGCCTGAGAAATCTTCTCCAGAAAAGAAGCCAgtgaagaaaattaaaaagaaaaagctTCGAGTGAGATCTTCTTTGGAAAGGAGTGCTCGAGCAAAGCCAAAGGACAAGAGTCGCAGGATAACTAGATCGTGGCGAGgagataaatatttgaaattactCAGTGTCAATATGAAAAACCAAGaaTCTCATAGTGTACCAAAATCTAACGAAAAAGAAGTCGTTAAGAAACCGAAAGCTTTGCCACAGAACAGTGATAAGCCAGTCGCTACAAGCCCAAAGACTACCAACATTCCAAATGGCACTAGTAAAGAGCCAACTGAAACCGAACGACGTCCATCAAATTGTGAAAAGGCAGAGAAAGCGAGTGGAAACCAGCATGTGTACTTAGACCTCCTTCCCCGCGACAGTCCGCACGTCATACAACTCACTACGGGGAAAGCCCAGAACCAGAACAAGCGCATGATGCGAGCGCGTCTCATACCCAAGTCTCAAGCGAACACCACACAAGACTTCACTATAGTTGAGAATGAACCTATACTCGGCCCAATTCTTCAGACGTTCAAATTGGAGAAAAAGGAACAGGACGTTATAGATATTAGCGATGATTCGAGTCGCGGATCGACGGTCAAGAACGAAGAGAGCGATGGCAACAACAGTCGAACGAAGAGACATAGTCAGAGCTCCAGGATACTGCATAGCTTCGACGAAGTGAAGGCTCTAGAGGCCCCCACATTCTGTCTAACGGAAAAGGAATTTGATGcaaCGTTCTTCGAAAAAATCGCACCGACGGCCGCAAAATATGGGGTGTGCAAGATAGTCGCGCCGCCGAGCTACAAGCCGAACTGCGTGCTCGACGACGACATAAATTTCCACGTGACCAACCAGTACATCGGCCGCCTGTACAGCCGCTGGGGGCCGGCCATGCGCGAGATGTGCGCCATCAAGGCGTACCTCGCCTCGCAAAATATACCGTTCAGGGCGCCTttgTTGGACCACCTAGAGCTGAACATACCGAAGCTACACCGTCTGGTGCAGCGGAACGGCGGTCTCAGCCAAGTTCTGGAGCTGAAGCGGTGGAACCGCGTCGCCGAGGAGATGAGGATCCACAAGACTGGTCATCAGTTCCTCGACCGCATCTGCATGAAGACGCTGTTGCCATACGATACCCTCAGCTCGCAGGAGCGTCAACAACTACTGGCAAAAGTGGAAAAAGGCTGGAACAGAAAGAATCAGAAACTTCTGGAATGGGCAATCAACCCACTGCACAGGCAAAAGAAACTCCTTGGCGAATCTGACTCCTCGGAGGAGGAGGCAGAGGAAGACCCCAATGTGACCATCGCTCTTAAAGAGGCCGAAGATTGCATCGTCAAAGGGAGGAGCATGAAATTGACTGGATTTAAAAAGGTGGCGACGAATGCAAAAGAGACTTTGCTCGGACGAGGCGAGCGCACGTGCGCGGAGATCGAGGAAGAGTATTGGCGCTACGTGCTTCTGGGAACCGACCATGTTTGCGTGAACACAGCGTCCATAGACACGGGGAAGTGTGGATACGGCTTTCCGAGGTCCAAAACCGATCCCAAAGCAAAACATCCTTGGAATCTCAAGATGATGAGCCAGAACAGCGGCAACGTGCTGCGCTCTCTGGGCATGGTGCTGGGCGCCACGGTGCCCACGCTGCACCTGGGTATGGTGTTCTCGACCAGCTGCTGGCACCGCGACCCGCACGGCCTGCCCTGGCTCGAGTACATGCACACGGGCCCGCCCAAGATATGGTACGGCATACCGGACGAACAGAGCGCTAATTTCCGCAAAGCAGTCGAAACCCTCTGCCCGACTTCCTGCCAGAACAAGTCCATATGGCTGCCGTCAGACATCACTATGATACCGCCGGAACTGCTAAGGACCCACGGTGTGGCGCTGGCAAGGGTCGAACAGAACCCCGGGGAGTATATCATGGTGTTCCCCAAGGCGTACTCGTGCTCAATATCTACGGGATACACGGTCTCTGAGAGTGTGTACTTTGCGACGGATTCCTGGTTGAAGGATGTCGATAAGGTCTTCCAGGAGCTGCGCGAGAGCTGCGAGCCGACGACGTTCTCGCTGGAGCAGCTGCTGACGGCGCTGGCGCTGGACCCGCGCAGCCGGGCGGCCACGCGGCGCCTGGTGCGCGCGCCGCTCGCCGCGGGCGTGGCGCGCGAGCGCGGCCTGCGCCGCCGCCTGCGCGAGCGCGGCCTGCAGGTGGTGCAGGAATCGCGCAGTAACAAGCAGCGCGGCGCCGCGGCCGACGCTTGGACCGACCAGGAGGAGTGCGAGGTGTGTCGCACCACGCTCTACTGGTCCAAGGTGACGTTCCTGAGAGGGCGCCGATCGGCTGTGTGTCTGGAGCACGCGCTGCGCTTACTAGACACGCCGCGCACGCGCGGCTGTGACGTCGCCGAGATGCAGCTGGTCACCATGTTCTCGCAGGAGCAACTCGACCAGTCCGTGCAGTCCCTCATCGCCGCCACCACGTAG
Protein Sequence
MKSRKVQAQRKFAQGAYIPPNHNNNLPVRVDHNVTPTKEDRSIIHHNLAAKNLLDIVSFQSMHPHAEPRVLLQRLSNKETQAQNGHPPSPSGPDEPVTTPSTQASPTEPPPVKKAAHEKHKKEAKIVLKKKVTFAPHTRIPYRTRGATNHQLLAKRRSPAQVRPTRKRILERQGSSSDFDDETPLSLAKLKKENQIQSKETNMFTDKDTKIVSSPEKSSPEKKPVKKIKKKKLRVRSSLERSARAKPKDKSRRITRSWRGDKYLKLLSVNMKNQESHSVPKSNEKEVVKKPKALPQNSDKPVATSPKTTNIPNGTSKEPTETERRPSNCEKAEKASGNQHVYLDLLPRDSPHVIQLTTGKAQNQNKRMMRARLIPKSQANTTQDFTIVENEPILGPILQTFKLEKKEQDVIDISDDSSRGSTVKNEESDGNNSRTKRHSQSSRILHSFDEVKALEAPTFCLTEKEFDATFFEKIAPTAAKYGVCKIVAPPSYKPNCVLDDDINFHVTNQYIGRLYSRWGPAMREMCAIKAYLASQNIPFRAPLLDHLELNIPKLHRLVQRNGGLSQVLELKRWNRVAEEMRIHKTGHQFLDRICMKTLLPYDTLSSQERQQLLAKVEKGWNRKNQKLLEWAINPLHRQKKLLGESDSSEEEAEEDPNVTIALKEAEDCIVKGRSMKLTGFKKVATNAKETLLGRGERTCAEIEEEYWRYVLLGTDHVCVNTASIDTGKCGYGFPRSKTDPKAKHPWNLKMMSQNSGNVLRSLGMVLGATVPTLHLGMVFSTSCWHRDPHGLPWLEYMHTGPPKIWYGIPDEQSANFRKAVETLCPTSCQNKSIWLPSDITMIPPELLRTHGVALARVEQNPGEYIMVFPKAYSCSISTGYTVSESVYFATDSWLKDVDKVFQELRESCEPTTFSLEQLLTALALDPRSRAATRRLVRAPLAAGVARERGLRRRLRERGLQVVQESRSNKQRGAAADAWTDQEECEVCRTTLYWSKVTFLRGRRSAVCLEHALRLLDTPRTRGCDVAEMQLVTMFSQEQLDQSVQSLIAATT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-