Basic Information

Insect: Coenonympha glycerion
Gene Symbol: stc
Assembly: GCA_963855885.1
Location: OY979639.1:13280665-13309765[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 2.8e+04 -4.3 1.6 15 19 517 521 516 521 0.81

2 14 0.061 5.7e+02 1.3 1.2 2 10 549 557 549 557 0.93

3 14 0.00019 1.8 9.3 17.3 4 19 565 580 563 580 0.93

4 14 3.9e-08 0.00037 21.1 13.6 1 19 616 634 616 634 0.97

5 14 1.5 1.4e+04 -3.1 0.3 8 11 639 642 638 642 0.86

6 14 3.5e-05 0.33 11.7 15.5 1 19 675 693 675 693 0.99

7 14 2.6e-06 0.025 15.2 12.0 2 19 738 755 734 755 0.93

8 14 3 2.8e+04 -4.8 1.7 6 10 785 789 785 789 0.95

9 14 0.0037 34 5.2 7.3 1 12 795 806 795 806 0.94

10 14 0.06 5.6e+02 1.3 0.4 3 10 809 816 808 816 0.91

11 14 5.7e-06 0.054 14.2 14.0 3 19 824 840 822 840 0.92

12 14 0.058 5.4e+02 1.4 17.2 1 18 879 895 879 896 0.81

13 14 1.4e-07 0.0013 19.4 11.8 1 17 932 950 932 956 0.85

14 14 0.016 1.5e+02 3.1 13.1 1 18 962 984 962 985 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	2.8e+04	-4.3	1.6	15	19	517	521	516	521	0.81
2	14	0.061	5.7e+02	1.3	1.2	2	10	549	557	549	557	0.93
3	14	0.00019	1.8	9.3	17.3	4	19	565	580	563	580	0.93
4	14	3.9e-08	0.00037	21.1	13.6	1	19	616	634	616	634	0.97
5	14	1.5	1.4e+04	-3.1	0.3	8	11	639	642	638	642	0.86
6	14	3.5e-05	0.33	11.7	15.5	1	19	675	693	675	693	0.99
7	14	2.6e-06	0.025	15.2	12.0	2	19	738	755	734	755	0.93
8	14	3	2.8e+04	-4.8	1.7	6	10	785	789	785	789	0.95
9	14	0.0037	34	5.2	7.3	1	12	795	806	795	806	0.94
10	14	0.06	5.6e+02	1.3	0.4	3	10	809	816	808	816	0.91
11	14	5.7e-06	0.054	14.2	14.0	3	19	824	840	822	840	0.92
12	14	0.058	5.4e+02	1.4	17.2	1	18	879	895	879	896	0.81
13	14	1.4e-07	0.0013	19.4	11.8	1	17	932	950	932	956	0.85
14	14	0.016	1.5e+02	3.1	13.1	1	18	962	984	962	985	0.82

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCATACAACTATAACAACCAGTACCAAGCTCCAAACGCTTGGAATGGGGAATACAACGCACAGTATTTAAACCAACCCCAGTACTATCCGAATCCCAGTAGGCAATATGATGCCAATCGCCAGTATGAAACCAATATCTGTAATGAGCCCACTAATAACTCTGGAGACAACTTACTGAAAGAATCATCAAATAGTACTAGTGAAAGCCAAAATCGTAATCGTAAATCAAAAACCCGTCAATCTGATATCAAGAATAAAGACTCCAATAGTCGCAGAAAAGATAAGAATCCAGAAGAATCTAATAATCGCAGAAGAGACACTAAAGATGATTTTCATAGTCGCAGGCAAGACCAAGAAGACTGTTATCGTAGGCAAGATAACCAAGGTGATTCTAGTTATCGTAGGCAAGATAAAGTTCAAGACCACTCTAGTTCTGGTAATTCAGAAAACCAAGAAGACTCTACAAATAATAGAAAACATAATAAACAGGAAGACTCAAGTTATCATAAAAGAGAAAATAACCAAGAAGAGTCAAGTTCTCGAAGAAGGGATAATAATCAAGAAGACTCTAGCTATCAGAGAAGAGATAATAACAAGGAAGATTCTAGGTATCGTAGAAGAGATAACCGAGAAGATTCTAGCTATTATAGAAGAGATAATAACATAGAAGACTCTAGCTATAATAGAAGAGATAATAACAAAGAAGACTCTAGTTATCGTAGAAGAGATAATAACCAAGAAGAGTCTAGTTATCGTAGAAGAGATACTACCCAAGAAGATTCTAGTTACCGTAGAAGAGATAATAATCTAGATGACTCTAGCTATCATAGAAGAGATAATAACAGAGAAGACTCTAGTTATCGAAGAAGAGATAATACCCAAGAATTCAGTAGATCAAACAGAAATACCAACTATAACACACAAATCCAAGATCAAAGAGATTCCAGCTACCGTAGAAGAGACAATCAAGAAAATAAAGGATTtaataaaaacagcaatcattTTGCTCAGAACCACAATCAAAACCAACATAATGATCAGAATGTTGTTGATGATGATTATGAAGTCGGCCAATCCAAAAGCAACGCTAACATAGAGTCTGATGTATACCGCACTTTTTACAACAGCTCTTTGCCTCAAGAACCACAGGATGTGAGACACAGTAGAGAAGTTTCTGGAAAGAATCGTAAGTGGGCCGGCAGTCAGAGACTCAGGGCTCCAGAGCGCACAGAAGATGAACAGTACGCTAGTTCTTATGTACAATATAGAGAGGAAAAGCAGAATGATTATGTATCCAGTCCAATGAGAAAGAATAGGGCTTCCACCTTTCAAGTAGGAAcAAATATAGAAATGACCCAAAGGGAACGGCTAAGTGAGCAACTAGACAATGGCACACTGGAGTGCTTGGTGTGCTGCGAGCGGGTGAAGCAGACCGACCCAGTGTGGTACTGCAGCAACTGTCACCACGTGCTGCATCTACGGTGTATACGCAAATGGGCAATGAGCAGTATAGTTAATACTAAATGGCGCTGCCCGGCCTGCCAGAACACAAATCAGGACATACCGACGGAGTACCGCTGCTTGTGCGGCGCGGTGCGCAACCCCGAGTACCAGCGGGGCTCCAGCGGCGCGCACACGTGCGGCCGCGCGTGCAAGCGGCCGAGGAGCTGTCCGCACCCCTGCGTGCTGCTCTGTCACCCCGGACCCTGCCCGCCTTGCCAGGCCACCATCAGCAAGCAATGCGGTTGCGGTGCAGAAACTCGGTCAGTCCTCTGCAGTAGTAAGCTGCCCCAAGTGTGCGGCCGAGAGTGTAAGCGTCAACTGGAGTGTGGCGTGCATTACTGTTCCAAGGAGTGCCACGAGGGACCTTGCGAGCCTTGCACCGAAACTGTTACACAAGTATGCCACTGCCCGGCCGCGAAGTCCCGCTCGGTGCCGTGCACGGCGAAGACGGGGTCGTGCGCCACGTGGTCGTGCGAGTCGGCGTGCGGCCGCGTGCTGCCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCCCGCCGTGCCCGCTGCGTCCCGACAACGTGCTCACGTGCCCGTGCGGGAAAACCAAACTCAATGAAGGCCAACGCAAGTCTTGCACGGATCCCATACCGCTGTGTGGCAAACCCTGCGATAAGATACTGGCTTGCGGGCCTGCAGGAGAGCACACCTGCACGGACAATTGCCATGAAGGGGCGTGCCGCGTGTGTCCCAAGAGCACGCTGCTGCAGTGCCGCTGCGGGCACTCCAGCCGCGAGGTGCCGTGCGTGGACCTCCTCGAGATGGTCGACAGCGTGCTGTGCCAGAGGAAGTGTAATAAGAAATTGTCGTGCGGTCGCCATAGATGCCGTACGGTGTGCTGCGACGCGTCGTCTCACCGCTGCGCGGTGGTGTGCGGCCGCATGCTGTCGTGTCAGTTGCACCGCTGCGAGGAGTTCTGTCACACGGGCCACTGCGCGCCGTGCCCCAGAGTCAGTTTCGACGAGCTTCGCTGCGAATGTGGCGCAGAGGTGATCATGCCGCCAGTGCGCTGCGGCACCAAGCCGCCGCCGTGCAGCGCGCCGTGCCGCCGGGAGCGGCCCTGCGGACACCCGCCGCACCACAGCTGCCACTCCGGGGACTGTCCGCCGTGCGTGGTGCTCACCACCAAGAGCTGCTACGGACGACACGAGGAACGCAAAACCATTCCATGCTCACAAGAAGAGTTCTCGTGCGGCCTACCGTGCGGCAAGCCACTGCCGTGCGGGAAGCACACCTGCATCAACACTTGCCACAAGGGCGCTTGCGACACTGGCAAATGTACCCAACCGTGCATGGAAAAGCGACCAAGTTGCGGGCACCCGTGCTCCGCGGTGTGCCACTCCAGCAGCGGTGGCACGTGCCCcagcggcgcgccgtgcaagcGCCCCGTGTGCGCCACGTGCCCCTGCGGCCGCCGCAAGGCTGAGCGCGCCTGCTGCGACAACGCGCGGGACTATGCCAAATTGATGAGCACTTTAGCTGCTTCTAAGATGCAAGAAGGTGGCACGCTAGATTTGTCCGAAGTGCAGCGTCCGGGAGCCATGCTTAAAACATTGGAATGCGACGAAGAGTGCTACGTGGAAGCCCGAAGCCGCCGCCTGGCGCTGGCTCTGCAGCTGCGCAACCCGGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAGCACCTGCGCACCACCGCCGCGCGCGAGCCGTCCTTCGCGCAGCAAGTGCACGACCGCCTCACCGAGTTGGTGCAGCTCGCGAAGAAGTCGAAACAGAAAACCAGAGCGCACTCGTTCCCGTCCATGAACCGCCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGACGCGGAGCCCAACAGAAACGTGGTCGCCACGGCCGACAAGGAGAAGTCGTGGCTGCCCGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGCAAGGTGCCCGGGCCCGTGCTGCGCGCGCCCGCGCTGCCGCCCGCGCAgccgcgcagcagcagcagcgccgcAGCCGCTAACAAATCCTCGAGTGGTTGGGCCACTCTGACATCAACGAACGCGTGGGCTGCGCGCAGTCAGCCCAGACAGCCACCCAAACAAGAACCCAAAGAAGAACCTAGACAGGAGCAGAAACGGGAGGCAAAGATAGACTACTTCGACAACCCGCCCGAAAACTGA
Protein Sequence: MSQWNNSYNYNNQYQAPNAWNGEYNAQYLNQPQYYPNPSRQYDANRQYETNICNEPTNNSGDNLLKESSNSTSESQNRNRKSKTRQSDIKNKDSNSRRKDKNPEESNNRRRDTKDDFHSRRQDQEDCYRRQDNQGDSSYRRQDKVQDHSSSGNSENQEDSTNNRKHNKQEDSSYHKRENNQEESSSRRRDNNQEDSSYQRRDNNKEDSRYRRRDNREDSSYYRRDNNIEDSSYNRRDNNKEDSSYRRRDNNQEESSYRRRDTTQEDSSYRRRDNNLDDSSYHRRDNNREDSSYRRRDNTQEFSRSNRNTNYNTQIQDQRDSSYRRRDNQENKGFNKNSNHFAQNHNQNQHNDQNVVDDDYEVGQSKSNANIESDVYRTFYNSSLPQEPQDVRHSREVSGKNRKWAGSQRLRAPERTEDEQYASSYVQYREEKQNDYVSSPMRKNRASTFQVGTNIEMTQRERLSEQLDNGTLECLVCCERVKQTDPVWYCSNCHHVLHLRCIRKWAMSSIVNTKWRCPACQNTNQDIPTEYRCLCGAVRNPEYQRGSSGAHTCGRACKRPRSCPHPCVLLCHPGPCPPCQATISKQCGCGAETRSVLCSSKLPQVCGRECKRQLECGVHYCSKECHEGPCEPCTETVTQVCHCPAAKSRSVPCTAKTGSCATWSCESACGRVLPCGAHVCRAPCHAPPCPPCPLRPDNVLTCPCGKTKLNEGQRKSCTDPIPLCGKPCDKILACGPAGEHTCTDNCHEGACRVCPKSTLLQCRCGHSSREVPCVDLLEMVDSVLCQRKCNKKLSCGRHRCRTVCCDASSHRCAVVCGRMLSCQLHRCEEFCHTGHCAPCPRVSFDELRCECGAEVIMPPVRCGTKPPPCSAPCRRERPCGHPPHHSCHSGDCPPCVVLTTKSCYGRHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCINTCHKGACDTGKCTQPCMEKRPSCGHPCSAVCHSSSGGTCPSGAPCKRPVCATCPCGRRKAERACCDNARDYAKLMSTLAASKMQEGGTLDLSEVQRPGAMLKTLECDEECYVEARSRRLALALQLRNPDVSAKLAPRYSEHLRTTAAREPSFAQQVHDRLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRKVPGPVLRAPALPPAQPRSSSSAAAANKSSSGWATLTSTNAWAARSQPRQPPKQEPKEEPRQEQKREAKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -