Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979654.1:3966724-3996098[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0094 0.58 11.4 0.2 1 23 205 228 205 228 0.97

2 19 0.069 4.2 8.6 5.7 1 23 235 257 235 257 0.98

3 19 0.065 4 8.7 5.2 1 23 269 291 269 291 0.98

4 19 0.21 13 7.1 0.4 1 23 295 318 295 318 0.94

5 19 0.011 0.66 11.2 1.4 1 23 370 392 370 392 0.97

6 19 0.046 2.8 9.2 0.7 6 22 407 423 403 427 0.88

7 19 0.013 0.78 11.0 0.9 1 23 469 491 469 491 0.97

8 19 0.015 0.91 10.7 0.5 2 22 500 520 499 524 0.91

9 19 3.4e-07 2.1e-05 25.4 1.2 1 23 532 555 532 555 0.96

10 19 0.11 6.6 8.0 0.1 7 23 656 673 656 673 0.92

11 19 0.11 6.6 8.0 0.1 7 23 774 791 774 791 0.92

12 19 0.11 6.6 8.0 0.1 7 23 892 909 892 909 0.92

13 19 0.11 6.6 8.0 0.1 7 23 1010 1027 1010 1027 0.92

14 19 0.11 6.6 8.0 0.1 7 23 1128 1145 1128 1145 0.92

15 19 0.11 6.6 8.0 0.1 7 23 1246 1263 1246 1263 0.92

16 19 0.11 6.6 8.0 0.1 7 23 1364 1381 1364 1381 0.92

17 19 0.043 2.6 9.3 5.6 1 23 1387 1410 1387 1410 0.91

18 19 5.3e-05 0.0032 18.5 1.0 3 23 1419 1440 1417 1440 0.92

19 19 0.18 11 7.3 3.5 1 23 1446 1469 1446 1469 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0094	0.58	11.4	0.2	1	23	205	228	205	228	0.97
2	19	0.069	4.2	8.6	5.7	1	23	235	257	235	257	0.98
3	19	0.065	4	8.7	5.2	1	23	269	291	269	291	0.98
4	19	0.21	13	7.1	0.4	1	23	295	318	295	318	0.94
5	19	0.011	0.66	11.2	1.4	1	23	370	392	370	392	0.97
6	19	0.046	2.8	9.2	0.7	6	22	407	423	403	427	0.88
7	19	0.013	0.78	11.0	0.9	1	23	469	491	469	491	0.97
8	19	0.015	0.91	10.7	0.5	2	22	500	520	499	524	0.91
9	19	3.4e-07	2.1e-05	25.4	1.2	1	23	532	555	532	555	0.96
10	19	0.11	6.6	8.0	0.1	7	23	656	673	656	673	0.92
11	19	0.11	6.6	8.0	0.1	7	23	774	791	774	791	0.92
12	19	0.11	6.6	8.0	0.1	7	23	892	909	892	909	0.92
13	19	0.11	6.6	8.0	0.1	7	23	1010	1027	1010	1027	0.92
14	19	0.11	6.6	8.0	0.1	7	23	1128	1145	1128	1145	0.92
15	19	0.11	6.6	8.0	0.1	7	23	1246	1263	1246	1263	0.92
16	19	0.11	6.6	8.0	0.1	7	23	1364	1381	1364	1381	0.92
17	19	0.043	2.6	9.3	5.6	1	23	1387	1410	1387	1410	0.91
18	19	5.3e-05	0.0032	18.5	1.0	3	23	1419	1440	1417	1440	0.92
19	19	0.18	11	7.3	3.5	1	23	1446	1469	1446	1469	0.96

Sequence Information

Coding Sequence: ATGGACACAACGACAGAAGTAACTTGTTTTGGTTGCCTGAATATCGGGAGAAGAATGATAGAAATAACTGAGGTCGATTTGCGAATGTGTTTTGctgaaattataaatgaaaatctgatATCATCTTTCTGCAGGCCACCTTTGCAGCTTTGTTTTGAATGTACCGCATTGCTTATTAAGTTTAATAACTTCAAAAAACAAGTGGCAACTTGTTTTGGAACACTTCAAAGTTATCATAAATCGACCACAAAGCCATTTGTCAGACTAAAACAAAAACACCAAGCAAACATTGATATTACATCTGAGGATTCGCCACAAAGCAATGCGGTTGAGGTGAACGTGGAATGTGTCAAGGTGGAACATGACACAGAGGATGACACGTCATGTTACATTTACAATGACATGCCGGACACAAGTGACGTCAAGGGGGAACCGTTACATGGAGATGAAATGCCTTTGATTAAGATCAAGAAAAAAAGGAAGAAACCCAATGGCAAAATAGAGACAGACAAGGGCAGAGGATCGTATTTTACGGAAGTGACGCTTAGTGCTAGAGAGATAGAGCACGAGAGAGCCATGCTAGCTATGCGAGAGGACTACGTGAATGCTATGTATACTTGCAATAACTGTATACTGACCTTCCCTAATGAAGATGACTTAAATGACCATCTACAAGTCAAACATGTAGTGAATGCGTACAAATACAAGTGTCAGATTTGCACTTGCTCGTTCAGTTCGGAGCTGTCCTACAAATAtcacacaaacaaacacacgCGTCCCTACCAGTGCTCTAATGCGTCCAAATACAAGTGTCAGATTTGCACTTGCTCGTTCAGTTCGGAGTTGTCGTACAACTAccacacaaacaaacacacgCGTCGCTACCAGTGCTCCGCCTGCGCGGAGAGGTTCGCCAACAAGCGGGCTGCCACCAAGCATTACAACTTCGCGCATTGCCACGGAACAGCCATTGACTATGAGAACTACAAAGAGTATACAGATAATACAGATACTACCATAGACAATAACATTGACAGTGCTCCTACTGACCACAGCACTGTCAAAGATGGTGAACCGAATGAAACAAGTGCACCAGAGGGAAACTCCTTCCCGTGCGAGTTTTGCGCGAAAATGTTCAAGTGGAAGACGTCTCTACGGAAACATCTGGAGAAGCATCGCATAGAGACCGGGCAGAAACGGAAGCCTTACTGCGCACCGTGCAAGCTCTCCTTCACGACCACTCCCAATCTGCAGAAACACGTCCGGACGAGctccaagcacaaaatacaactgaaactcagGAAACTCAGTGAAAACGAAACGGAGGGTACACAGAAACACACGAAACAGAAGTCCAAGCTGATGGACGAGATACGGTCGTCGGTGACGAGCGCGCAGCCGCAGTACAGCTGCCCGCAGTGCGACAAGGTGTTCCTGTGGCGCGGCAACCTGCTGCGACACCTGCACAGCCACGCCGCCAAGGCAAATGGCGACCTGGTGTGCAAGCCTTGCGACCGCACCTTCTCGTCCATAGCGACCTACCAGCAGCACATGCGGATTAGCAGGAAGCACGTCTCCGAACACGACTTCAAGTACATGTGCAGCGACTGCGGCAAGCGGTTCCCGACAAAGTCGCACCTCCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCGGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCGGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCGGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGtaccgctcccatacaacactCACTGGCGAGCGGTTCCCGACCAAGTCGCACCTGCGGGACCACATCAACTGGGAGCACCTCAAGCAGTTCGTGCACTCCTGCGACCACTGCCACAAGGTGTTCAAGACGAGCAACTCAGTGTATCTGCACAAGCAGGCAGTTCACAACAAGGACAGCGTCGAACACCTGTGCGACCACTGCGGGAAGGCGTTCCCGAACAACGCGAAGCTGCGGAACCACATATTAGGGATCCACAGCGGCGGCGCGGTGCACCGCTGCGCGTGGTGCGACGCGCGGTTCAGCTGGCAGTCCTGCCTGTCGCGACACGTGCGCCAGAAGCACGGCAAGCAGGCCAAGATGAGTGAGCACTGGCAGTCCTGCCTGTCGCGACACGTGCGCCAGAAGCACGGCAAGCAGGCCAAGATGAGTGAGCACTGGCAGTCCTGCCTGTCGCGACACGTGCGCCAGAAGCACGGCAAGCAGGCCAAGATGAGTGAGCACTGGCAGTCCTGCCTGTCGCGACACGTGCGCCAGAAGCACGGCAAGCAGGCCAAGATGAGTGAGCAGTTCGGCTGGCAGTCCTGCCTGTCGCGACACGTGCGCCAGAAGCACGGCAAGCAGGCCAAGATGAGTGAGCAGTGA
Protein Sequence: MDTTTEVTCFGCLNIGRRMIEITEVDLRMCFAEIINENLISSFCRPPLQLCFECTALLIKFNNFKKQVATCFGTLQSYHKSTTKPFVRLKQKHQANIDITSEDSPQSNAVEVNVECVKVEHDTEDDTSCYIYNDMPDTSDVKGEPLHGDEMPLIKIKKKRKKPNGKIETDKGRGSYFTEVTLSAREIEHERAMLAMREDYVNAMYTCNNCILTFPNEDDLNDHLQVKHVVNAYKYKCQICTCSFSSELSYKYHTNKHTRPYQCSNASKYKCQICTCSFSSELSYNYHTNKHTRRYQCSACAERFANKRAATKHYNFAHCHGTAIDYENYKEYTDNTDTTIDNNIDSAPTDHSTVKDGEPNETSAPEGNSFPCEFCAKMFKWKTSLRKHLEKHRIETGQKRKPYCAPCKLSFTTTPNLQKHVRTSSKHKIQLKLRKLSENETEGTQKHTKQKSKLMDEIRSSVTSAQPQYSCPQCDKVFLWRGNLLRHLHSHAAKANGDLVCKPCDRTFSSIATYQQHMRISRKHVSEHDFKYMCSDCGKRFPTKSHLRDHINWEHLKQFVHSCDHCHKVPLPYNTHWRAVPDQVAPAGPHQLGAPQAVRALLRPLPQGTAPIQHSLASGSRPSRTCGTTSTGSTSSSSCTPATTATRYRSHTTLTGERFPTKSHLRDHINWEHLKQFVHSCDHCHKVPLPYNTHWRAVPDQVAPAGPHQLGAPQAVRALLRPLPQGTAPIQHSLASGSRPSRTCGTTSTGSTSSSSCTPATTATRYRSHTTLTGERFPTKSHLRDHINWEHLKQFVHSCDHCHKVPLPYNTHWRAVPDQVAPAGPHQLGAPQAVRALLRPLPQGTAPIQHSLASGSRPSRTCGTTSTGSTSSSSCTPATTATRYRSHTTLTGERFPTKSHLRDHINWEHLKQFVHSCDHCHKVPLPYNTHWRAVPDQVAPAGPHQLGAPQAVRALLRPLPQGTAPIQHSLASGSRPSRTCGTTSTGSTSSSSCTPATTATRYRSHTTLTGERFPTKSHLRDHINWEHLKQFVHSCDHCHKVPLPYNTHWRAVPDQVAPAGPHQLGAPQAVRALLRPLPQGTAPIQHSLASGSGPSRTCGTTSTGSTSSSSCTPATTATRYRSHTTLTGERFPTKSHLRDHINWEHLKQFVHSCDHCHKVPLPYNTHWRAVPDQVAPAGPHQLGAPQAVRALLRPLPQGTAPIQHSLASGSGPSRTCGTTSTGSTSSSSCTPATTATRYRSHTTLTGERFPTKSHLRDHINWEHLKQFVHSCDHCHKVPLPYNTHWRAVPDQVAPAGPHQLGAPQAVRALLRPLPQGTAPIQHSLASGSGPSRTCGTTSTGSTSSSSCTPATTATRYRSHTTLTGERFPTKSHLRDHINWEHLKQFVHSCDHCHKVFKTSNSVYLHKQAVHNKDSVEHLCDHCGKAFPNNAKLRNHILGIHSGGAVHRCAWCDARFSWQSCLSRHVRQKHGKQAKMSEHWQSCLSRHVRQKHGKQAKMSEHWQSCLSRHVRQKHGKQAKMSEHWQSCLSRHVRQKHGKQAKMSEQFGWQSCLSRHVRQKHGKQAKMSEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -