Basic Information

Insect: Coenonympha glycerion
Gene Symbol: B0310.2
Assembly: GCA_963855885.1
Location: OY979654.1:1760942-1781497[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.038 2.3 9.5 0.8 1 23 414 437 414 437 0.93

2 10 0.56 34 5.8 0.2 1 23 441 463 441 463 0.92

3 10 0.0061 0.37 12.0 1.0 1 23 468 491 468 491 0.98

4 10 0.0041 0.25 12.5 0.7 1 23 495 518 495 518 0.96

5 10 8.5 5.2e+02 2.1 0.1 2 21 531 550 531 551 0.84

6 10 0.16 9.9 7.5 0.2 2 23 604 626 603 626 0.96

7 10 0.014 0.84 10.8 0.5 2 20 642 660 641 663 0.92

8 10 2.8e-05 0.0017 19.3 2.5 1 23 669 691 669 691 0.99

9 10 0.00034 0.021 15.9 2.8 1 23 698 720 698 720 0.98

10 10 4.8e-05 0.0029 18.6 1.1 1 23 726 749 726 749 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.038	2.3	9.5	0.8	1	23	414	437	414	437	0.93
2	10	0.56	34	5.8	0.2	1	23	441	463	441	463	0.92
3	10	0.0061	0.37	12.0	1.0	1	23	468	491	468	491	0.98
4	10	0.0041	0.25	12.5	0.7	1	23	495	518	495	518	0.96
5	10	8.5	5.2e+02	2.1	0.1	2	21	531	550	531	551	0.84
6	10	0.16	9.9	7.5	0.2	2	23	604	626	603	626	0.96
7	10	0.014	0.84	10.8	0.5	2	20	642	660	641	663	0.92
8	10	2.8e-05	0.0017	19.3	2.5	1	23	669	691	669	691	0.99
9	10	0.00034	0.021	15.9	2.8	1	23	698	720	698	720	0.98
10	10	4.8e-05	0.0029	18.6	1.1	1	23	726	749	726	749	0.93

Sequence Information

Coding Sequence: atgCGGTGTTGTGTACGAAATTGTGGAAATGACACGAAAAAAACTACAAAGAACCATGGCATCACGTTTCACATGTTTCCAAAAGAGCCAAATCTCAGGAACTCCTGGATAGAGGCACTGGGCTTGGCAGAATGGGAACCCAAAGAAAGGAGTGCAGTATGCTCGGAACATTTTCAAGAAGACTCTTTCTATGAGACCCGACGCGGCCTGAGAAGGATCAAAAGCGGTACCATACCCCTACCAGTCCAGGAATCGGATGAAGACTTGGACGCTCCAGCCACTCATAggGTGTGCCGAGTCTGTCTGTCCGTGGATGCGAGAATGTACAATCTATCGGAGAAGAACCTGGGGCTCATGTTTGAACAAATCATCGGGATGACGAGCACTGCCAGCGACCGGCTGCCGCAGATGCTGTGCTGGGAGTGCGTTGCGCGGTTGAGCTCTGCGAGCAGCTTCCAGAGCAAGGCGTTGAGATGCCAGACCCTGTTGCTGAACACCCTCGAGGTGGATAGATATATCACTCTAAGAGATGTAAAATCGATTAACCGAGCTCAAAACCAACTGAACTCAAGTTTACGACAGAAAGTATACGAAGCCAACGAATATGACTACGTGTTCAACGAAAACGATAGTAAAACGGTCAAAATCGAGAAAGTTGGCGAATTTAACGGAATTAATGATACCGGGGTTAACGAGTTTAATCAAAACAGCGACGGCAATGATTTTACCGGAGATGACGATTTTGATAACGGCCCAGATGTTGATAATGTAGAAAATGGCGGCGATTTGAAATTGGAAGTGGAAATTAAAGACGAGCAGACAAACAACGAAATATTCTTCGAAGAATACCCGGTTTTCGATGAGAGTGATAATATAACATTGAGTGAAAtgtataagaaggaaaaagtaaAGAAGAAAAAGGTTGTGAAGAAAGTGAAGGAAGGAAAAGCGAGAGTGAAAGTgaataagagaaaagaagacGATGATAACCCTTCGAGCACCATGGATAAGTACAAAAAGTCAGACGTGAAACGCAGAAAAACCACCGACGCGCTCGACGAGTCGCTTTTCACCATCACAACATTGACATATGAAGAACAGATCGCCGAGATACAGACGCGGCAGAACACAGCGGCGTATAAAAGTGCGCCCTTCAAGTGCGGCGCCTGCTACCGAGGGTTCCTCGTGCGGGACCGATACGACGCGCACGTCGTTAGACACAGCGAGCAAAGCGGCGCATACGAGTGTTTTATATGTAAGACTCGGCTGAAGACGGGTCGAGCGCTTAGAAAACACTTGACGGCGCAGCACACGGAGAAATTCAGTTGTAAGGGATGCCCCTTTGTCACTAGGAACAGAGGTGTGGCCAGAGAGCATGAAAAGTGGCACGCGGGGACAAAGTACCAGTGCCCGCACTGTCCTAGCGAATTCGACAAACTGACGACGTATATGGGCCATATCCGCATTAAACACGTATCGGACTTCGTGTGCGAGCTGTGCGGCTATACCTTCGTCAGCAAGAAGGGCATCGACGTGCACAAGAAGAAGAAGCACCGCCTCGCCGAGAAGAACGTGAGTCTAGACGGGCCGTACTGCGAGGTGTGTGAAGTCAGGTTCGTGTCGGAGGGGGCGCACTCGAGGCACCTGAAGCTGTCTTCACGACACAGCAGCGACAACGACCCTAACCGCATCCGCAACGACTCGCAGAGCATGAACACGGAGAAGAACGGCCGCGTGATGAGGAAGATAGAGCGGCGGCCCACCATCCACCCGCGCGCGGGCGTCGCGGGCACCGACGGCGCGCCCGTCACTTGCGAGCAGTGCGGTCTGCAGTTGAGAGATCTCAGGTTGTACGCGCAGCACTTCAGGAGAGCGCACCCGGACAAGAACAGAACCAAGTACCCCGCCATGAAGACACCGTGTATGTGTGAGCAGTGCGGACGGATATTCCAGAGCATGGCGCTGCTCAAGGACCACATGTGGGTGCACACCGGCGAGAAGCGGTTCAAATGCGACCGCTGCGAGAAGAGCTTCACCCAGAAGACGAACTTGGTGTTCCACATGCGCGTGCACAGCGCCACGCGGCCCACCTACGAGTGTCCGCTCTGCGGGAAGCACTTCGCCTTCTTCAACAACAGGCGGCGGCATATGTTCATCCACACTGGCCTCAAGCCGTTCAAGTGCGACACTTGCGGGAAGAGCTTCACGACGTCCGGCGAGCAGCGCGCGCACGTGGAGCACGTGCACCTCAAGAAGCCGTGGCCCAAGCGCGCGCGCGCCAAGCACGAGCACGACGCGTGGCAGAAGTGCGCGCTGCGCCACGAGGACTAG
Protein Sequence: MRCCVRNCGNDTKKTTKNHGITFHMFPKEPNLRNSWIEALGLAEWEPKERSAVCSEHFQEDSFYETRRGLRRIKSGTIPLPVQESDEDLDAPATHRVCRVCLSVDARMYNLSEKNLGLMFEQIIGMTSTASDRLPQMLCWECVARLSSASSFQSKALRCQTLLLNTLEVDRYITLRDVKSINRAQNQLNSSLRQKVYEANEYDYVFNENDSKTVKIEKVGEFNGINDTGVNEFNQNSDGNDFTGDDDFDNGPDVDNVENGGDLKLEVEIKDEQTNNEIFFEEYPVFDESDNITLSEMYKKEKVKKKKVVKKVKEGKARVKVNKRKEDDDNPSSTMDKYKKSDVKRRKTTDALDESLFTITTLTYEEQIAEIQTRQNTAAYKSAPFKCGACYRGFLVRDRYDAHVVRHSEQSGAYECFICKTRLKTGRALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLAEKNVSLDGPYCEVCEVRFVSEGAHSRHLKLSSRHSSDNDPNRIRNDSQSMNTEKNGRVMRKIERRPTIHPRAGVAGTDGAPVTCEQCGLQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCEKSFTQKTNLVFHMRVHSATRPTYECPLCGKHFAFFNNRRRHMFIHTGLKPFKCDTCGKSFTTSGEQRAHVEHVHLKKPWPKRARAKHEHDAWQKCALRHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00802332;
90% Identity: iTF_00354155;
80% Identity: iTF_00354155;