Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979654.1:8082675-8114738[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.092 5.6 8.3 2.7 1 23 25 48 25 48 0.95

2 14 0.0018 0.11 13.6 4.4 1 23 54 76 54 76 0.97

3 14 0.25 15 6.9 6.8 1 23 82 104 82 104 0.92

4 14 0.00013 0.0077 17.3 4.3 1 23 535 557 535 557 0.98

5 14 5e-05 0.003 18.5 1.6 1 23 564 589 564 589 0.98

6 14 0.00063 0.038 15.1 0.3 2 23 598 620 597 620 0.96

7 14 0.0043 0.26 12.4 1.6 2 23 627 648 626 648 0.96

8 14 0.0099 0.61 11.3 3.0 1 23 654 678 654 678 0.94

9 14 0.0062 0.38 11.9 6.3 1 23 684 706 684 706 0.98

10 14 0.0025 0.15 13.2 0.4 3 23 715 736 714 736 0.96

11 14 0.023 1.4 10.2 0.3 1 23 742 765 742 765 0.96

12 14 0.034 2.1 9.6 4.2 2 20 772 790 772 794 0.93

13 14 1.8 1.1e+02 4.2 0.1 10 23 1338 1352 1336 1352 0.92

14 14 0.00043 0.026 15.6 1.4 1 23 1530 1552 1530 1552 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.092	5.6	8.3	2.7	1	23	25	48	25	48	0.95
2	14	0.0018	0.11	13.6	4.4	1	23	54	76	54	76	0.97
3	14	0.25	15	6.9	6.8	1	23	82	104	82	104	0.92
4	14	0.00013	0.0077	17.3	4.3	1	23	535	557	535	557	0.98
5	14	5e-05	0.003	18.5	1.6	1	23	564	589	564	589	0.98
6	14	0.00063	0.038	15.1	0.3	2	23	598	620	597	620	0.96
7	14	0.0043	0.26	12.4	1.6	2	23	627	648	626	648	0.96
8	14	0.0099	0.61	11.3	3.0	1	23	654	678	654	678	0.94
9	14	0.0062	0.38	11.9	6.3	1	23	684	706	684	706	0.98
10	14	0.0025	0.15	13.2	0.4	3	23	715	736	714	736	0.96
11	14	0.023	1.4	10.2	0.3	1	23	742	765	742	765	0.96
12	14	0.034	2.1	9.6	4.2	2	20	772	790	772	794	0.93
13	14	1.8	1.1e+02	4.2	0.1	10	23	1338	1352	1336	1352	0.92
14	14	0.00043	0.026	15.6	1.4	1	23	1530	1552	1530	1552	0.98

Sequence Information

Coding Sequence: ATGGTAGTAAAGGTGTTCTTGGAGAGGTCGGGGCTCGCGCACCACGTGCAGCTGCACGCGGCCAGCAGGCCGTTCGCGTGCGAGCTGTGCGCGTACACGTGCAAGACCAGGAAGTACCTGAGCAAGCACACGGCGCGCGTGCACACGCCGCCCACGGGCCACGAGTGCGCGCTCTGCGGCAAGCGGTTCCACTTCAAGAGCCTGCTGGGCAAGCACATGTACACACACACAGATGAGCGGCCGTACAAATGTGAAGTGTGCAACAAGGGTTTTAATTCAAAATTCTCCCTCCGGTGTCACAAACATTTACATACAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCAGGCATCGCCATACTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGCACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCAGGCATCGCCATACTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGAGGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCCTCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGTGATGACGTGCCTGTGAGAGTGGACCCTGTGCCGGTGCACGCACTTGTACAAGACCATCACTCACCCAGGTCTGCAGAAGCAGCCGGGCATCGCCACGCTGAGGCAGCGCCTGGACTGCAAGGCGCTAAACCATACAAGTGTAGCTATTGCGAGTACGCGTGTCGAGACAATTCGACGCTGCGTAAACACCAGGAGCGACACGCCGGCGTCACTCGCCTGTACCAGTGCACAGCCGCGCACTGCGACAAGAGCTACAAGTCGAAGAGGGCGCTCAAGACGCACGTGTCCACGGCGCATTTACATCTGGACGTGAAGACAAAGCCATGCGCGCAGTGTGGTAAAATGTTCCCCTCGTTGACACGCCTCAACAACCATATCAAGAGGGCTCACGAGAGGGTGTACGCGTGCAAATGCGAGATCTGTGGCGTCACTCTCTCGAGCAGATACAACATGGCGACCCATCTCACCAAGCACATCGACTACCGCCCCTTCGCCTGCTCCTTCGAGGGCTGCAGCAAGAGGTACAAGGACAAGTGCTCTCTAAAGAAGCACACGATAGTCCACTACCCGGAGCAGCACTTCGAGTGCGACGTGTGCCACAAGAGGTTCTCGCGCCTGCACCGCATGCGCGCGCACAAGAGACAGCATCGCGCCAAGCGGAAGAGCGTCTTTTGTGACTATTGCGGGAAAGGGTTCTACAACAAGAACTACATCGCCGCGCACATCACTCGCAAGCACATGTACCGCCAGCCGTACATCTGCGACCTGTGCGGGCTTGTCACGTACAACAAGCCGTCCCTGGTCATGCACCTTAAGCACGGACACGCCTCGGAGACGGATAGAAAGTGTAAGATCTGCAAGAAAACCTTCAAGAAACACATGTACCTGAAGCTACACTACTGGAGGACACATAGCATCAAATACAAAATGAACAAGCACAAAGCAAGGAAACCTAAGAAAAAGAAGAATGTCATAATAGAAGAAACATCAGCCCTGGAACTATTGCACGACATCAAAGCTGAACCGCTCAGTGATAATGAAGAAAACTTAATGAGAGAGTGCGTGGAATACTCAACCGGGGTTTTAATCGGAGAGACGTCGGGGCGTGACGCTAGTGCTGCTGAGAAGAGCCTCGCGGACTTCTTCGTAGAGCACGTTATAACCCCAACTTGCGCCGCAGACGAAAAAAGAGCAAGCGAAAGAGCGAAAGAGACGGATGTATCCGTGGACGCGGCATGCCAGAGGGAGGCGGAACGAGTACGCGCAGAGATGTTGCGGCGGTGGCGAGCGAACAACCCGACCGCCAAGCCGTTCGTCAAGCTTAAGAGGTTCTATGGAAGCGCCAAACGTGCCAACGTCACGCCCAAAAAAGAAAAAATCGAAATTACAGTCTCCAGCGAAACGGAATACGATTCCGAAAAAGTTGACAATAAACATGAAAATCAAAAATTCAGTCAGAAAAACCATAGCGGTGATAGTATACCAACAACTGATGATTTCATTAAAACGGCTCAGACAATAACTGTCGGCAAACAGAGAAGTCCTGATGATTTTGAAGAAGCTCACAATGATGAAGCGTCATTACATAATAATGAGAACAAAAAAGGTGATTTAATTACAGCAGATGATAATCAAGGATTAATTGGTGATGAAGGTATAAATAATGAAGGAACAAGTAGCGTAAATCAGATAGCTAAAGACTTAGAACCAATAGAAAACAGTGTAAAAGAAGTTAGTGAATCCAATGCTTTCGAAAATATCGGTTATGAAAGTAGTTTAGCGGAACTGGTTAAAACTAATAAAAGGAAATGTGCGAGGAACGCAAAGAAAATGAATTACACAGATCCCggtagtgatgatgatgaaataagAAAAAGAGATATTAACATTGAAGAAAGTAAACACGAATTAACCGTAACTGGTGATTTAGTTCATGATATATCGAATAATGAAACCAGAGTTGGTGAGagcaataaatataaacatatcAATAGCAAATCGGAGAAAAAAGTTAATAGAAAACCAAGGAAGAAGCAATCTAAAAGAATTAcgaataataacaatattagaatTAAAAATTGTGGCATAGACAAACTTAAAGCAAAGATAATGGATAATAGTGAAGAACTTTTAGATAGTGATGTAACTTTGGAAACAAATATAGAAAATGATCAGACGAATTCAACAGAAAATGACGACATTAATACAGAACTAGCACTTTTAGAAGAAAGAGGTGAATATAACACTCGGAGAAGTGTTAGAATTCTTAAAAGGAAAGtcaaggaaaaaataaacagtCGTAATAAATGCAATGATGTTCATAATGATTCCGGTGGTGATGATTATGAAGATGATGAGGATTTTGTACCTGATGATGAAACGGTGAAAGAAAAGAATCAATCGAATAAGTTTAAAATCAACACGCACCAATGCTACGTCTGTTTTAAGTTATACGAAACAAAAGAGAAGCTGTTGGACCACTGCAAGGAACATTTCGACGTCTGCAATATTAAAATGCTCAAAAAATATCCCCTCTGCGATTTCGCCACTAGAAGCGATCTAGTGAGACATGTCCGGCTCatgcataaaattaaattaaactatcTCTATGGTACTCTCAAAGACAGAAAGAACAACAACGCAAAATCAAGGTTCTACTTTAACGTCACAGATGATGCAATAAAAGAGGTTGAGGTCATACCGAGCATCAAGAACCTGAATAGACAAGCTTTCCTCAAAATAGACAGAGAAAGACGCAAAAATAATGACAAAGAAGTAAAGAAAACTAAGCTGGTCAAAAAAGATGGCGAATGGATAGTAGAAAAAGTGCTTataaacacaaaaaattacCTGCTCCCCGACAAAGTTGAAGAGTTACTTAAAAATAACGAAAAGGAATCGACCAGTAATAACAGTGATATAGAAAACAATGATAAAactgtagaaaaaaataataaaagtggTAATACTGAAAACGGTGGAGACGAATCCGGAGAAAATGCTGACAAACCTGAGAATCCACGTCAAAATGATGTAAAAGAACTGACTTCTGAGGAATACTGTGCTAAAATGCGAAAGTTATATCACATCGCGAAGAATAAGGGTCACAAAATGCTCTTCCCTTGCAACGAATGCGAAAAAATCTGCCAAACTCTGAGCGCACTGAAGTTGCACTTACGAAGACACGACCCCAACGCTAAACCGTTCGCGAAAAAAGTGTGGAAACACAAACTGACGGAGGAACAACTGAAACAGCTCCAAAAAGACAAGGAAAAAGGCAGAAACATaagaaaaaacaataaaaatagataCGAGAAACCAAAACCAATAGTCAATAAGCATAAATGCGATCCGAAGTTAAAagatttctatgaaaaaaacatTAAAGGCGGCGACATTGAGTTCTGGCAATTTCTGAAGATCTTCAACAAGATCACGCGGGAAAACGTCAATGATTTCTCGGATCTGGAACAGTTTACCGCGTTCGGAAATTATTTCTATGACCCCGCTGCTAATCAGAAAAATGAGGGTAGTTCTATAAATAGTGATTCAGACCCATCGAGAGATGAGGGAAAGAATATAGGGAAAGACAGCAGAAAAAAGAATTACTTAGAAAGAAAATGA
Protein Sequence: MVVKVFLERSGLAHHVQLHAASRPFACELCAYTCKTRKYLSKHTARVHTPPTGHECALCGKRFHFKSLLGKHMYTHTDERPYKCEVCNKGFNSKFSLRCHKHLHTEAAGHRHAEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAAGHRHAEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAAGHRHAEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAAGHRHAEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAARHRHTEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAAGHRHAEAAPGLQGDDVPVRVHPVPVHALVQDHHSPRSAEAARHRHTEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAAGHRHAEAAPGLQGEDVPVRVDPVPVHALVQDPHSPRSAEAAGHRHAEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAAGHRHAEAAPGLQGDDVPVRVDPVPVHALVQDHHSPRSAEAAGHRHAEAAPGLQGAKPYKCSYCEYACRDNSTLRKHQERHAGVTRLYQCTAAHCDKSYKSKRALKTHVSTAHLHLDVKTKPCAQCGKMFPSLTRLNNHIKRAHERVYACKCEICGVTLSSRYNMATHLTKHIDYRPFACSFEGCSKRYKDKCSLKKHTIVHYPEQHFECDVCHKRFSRLHRMRAHKRQHRAKRKSVFCDYCGKGFYNKNYIAAHITRKHMYRQPYICDLCGLVTYNKPSLVMHLKHGHASETDRKCKICKKTFKKHMYLKLHYWRTHSIKYKMNKHKARKPKKKKNVIIEETSALELLHDIKAEPLSDNEENLMRECVEYSTGVLIGETSGRDASAAEKSLADFFVEHVITPTCAADEKRASERAKETDVSVDAACQREAERVRAEMLRRWRANNPTAKPFVKLKRFYGSAKRANVTPKKEKIEITVSSETEYDSEKVDNKHENQKFSQKNHSGDSIPTTDDFIKTAQTITVGKQRSPDDFEEAHNDEASLHNNENKKGDLITADDNQGLIGDEGINNEGTSSVNQIAKDLEPIENSVKEVSESNAFENIGYESSLAELVKTNKRKCARNAKKMNYTDPGSDDDEIRKRDINIEESKHELTVTGDLVHDISNNETRVGESNKYKHINSKSEKKVNRKPRKKQSKRITNNNNIRIKNCGIDKLKAKIMDNSEELLDSDVTLETNIENDQTNSTENDDINTELALLEERGEYNTRRSVRILKRKVKEKINSRNKCNDVHNDSGGDDYEDDEDFVPDDETVKEKNQSNKFKINTHQCYVCFKLYETKEKLLDHCKEHFDVCNIKMLKKYPLCDFATRSDLVRHVRLMHKIKLNYLYGTLKDRKNNNAKSRFYFNVTDDAIKEVEVIPSIKNLNRQAFLKIDRERRKNNDKEVKKTKLVKKDGEWIVEKVLINTKNYLLPDKVEELLKNNEKESTSNNSDIENNDKTVEKNNKSGNTENGGDESGENADKPENPRQNDVKELTSEEYCAKMRKLYHIAKNKGHKMLFPCNECEKICQTLSALKLHLRRHDPNAKPFAKKVWKHKLTEEQLKQLQKDKEKGRNIRKNNKNRYEKPKPIVNKHKCDPKLKDFYEKNIKGGDIEFWQFLKIFNKITRENVNDFSDLEQFTAFGNYFYDPAANQKNEGSSINSDSDPSRDEGKNIGKDSRKKNYLERK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -