Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979632.1:712635-720564[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.00041 0.025 15.7 3.8 1 23 206 228 206 228 0.98

2 6 7.1e-06 0.00044 21.2 0.2 2 23 234 255 233 255 0.97

3 6 9.2e-06 0.00056 20.8 1.6 2 23 262 284 261 284 0.93

4 6 1.1e-06 7e-05 23.7 1.6 1 23 290 312 290 312 0.99

5 6 0.00014 0.0086 17.1 3.4 1 23 318 340 318 340 0.99

6 6 3.5e-07 2.2e-05 25.3 4.0 1 23 346 368 346 368 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.00041	0.025	15.7	3.8	1	23	206	228	206	228	0.98
2	6	7.1e-06	0.00044	21.2	0.2	2	23	234	255	233	255	0.97
3	6	9.2e-06	0.00056	20.8	1.6	2	23	262	284	261	284	0.93
4	6	1.1e-06	7e-05	23.7	1.6	1	23	290	312	290	312	0.99
5	6	0.00014	0.0086	17.1	3.4	1	23	318	340	318	340	0.99
6	6	3.5e-07	2.2e-05	25.3	4.0	1	23	346	368	346	368	0.99

Sequence Information

Coding Sequence: ATGGAGGGCATCCACGTGGCCGTGGACGAGAGCGGCGAGCCCTACGAGCAGACGCTGCTGCCGCACCTCACCGTGGAGAACGGCCACGTGCACCAGGAGCACGTCAGGAGCTGGTACCTTCGCAACGGAGCAAGTCCTGGCGCGGTCTCACCGCTGTGCGCGTGTGGAGGCGCGGGGTACTGCCCCGCTTGCACGCACCCATCCCCGCCGCCTCTGCACCCCGCCATCACCCCGCAAAACCACCCACCCAACAACGAAACCGCCCCCGAAGCCACCCAAACCTCCCAAACCACCCAACCTTCCCAAACCACGCAGTCCTCACAGACTTACGTTTCGCAGACCAGTCAGACCCAGACAATTATCCGGCCGACCAGTCCGGCGACCAGTCTAGCGAGCAGTCACACGACTAGTCAAGTTACTCAGCCACAAGCGACGGACAGTCAACGGTCTATTGAAGCTAAAGAAGAAGCCCTTCAAAGGATGTTTGACACCAACGAAGAAGAAACGTCACACCCCACGTTCCCAGTCACGGAGATCCTCGGAATCGCTTCAGGGCTAGACTTGAAAGACGAGGACGCGGCGAAGGGCAAGTCGGACAAGAAGAAGCCGAAGTCGTTCGAGTGCCCGCACTGCCGGAGGGTGTTCCAGCACCGGAACAGCCTGCTGTACCACATCCTCATGCACAGCGAGAAGCAGCAGGTGTGTCGGGAGTGCGGCAAGGGCTTCTACACCGCCAGTGCCTTAAAGATCCACAAACGCGTGCACAGCGACGACCGGCCGTGCAAGTGCGACGAGTGCGGGCGCGAGTTCCGCCAGTGGAGCGACCTCAAGTACCACAAGGCTTCCATACATTCCAGTAAGAAACAATTCAAATGCGAGTTCTGCGACAAGGAGTTCGCGCGGCGCTACTCGCTCAACGTGCACCGCCGCATCCACACCGGCGAGAAGAACTACAAGTGTGACTTCTGCAGCAAGACCTTCCGCGCCTCCTCCTACCGCCTCAGccacatgaggactcatacaGGGAGCAAGCCTTACAAATGCACGCAGTGCGATAAATGTTTCCGAGTGTCATACGACTTGCGCAGGCACATGTTGATACACGACAAGGTGCGCGTCCGACTAGAAGACCACAAAGGCAACATCAAAGAAGGCAAACATAAGAAACCCTCCGTCGATATCAAACTAGAGCACAACCCTGAGAAGAAACCAAAATCACCCCAAAACGTCGAGAAGAAACAAGACGTCCGACTGCCGATATTAAAGAGTCTACTCGACAAAAAACAACCCAAGTCCAAAAAGAGCCCCAAAAAGCCACCCAACGTCACAGTCCAAAACAAAGAGGGGCATTTCAAAATGAACATCGATGCATTCGAATCGAGGCAGGAGCAATACATTCTTAGCGATTACAAACATAAGGTTTCCGAAGATATCGTTAGATTACAAGAGAGAAACGATGAAAAAGAACTAAGGACCTACCTCAGGTCTTCGAAAAATCAGCAAATATGCGACATAGTCGACAGCGATAGGTTAGTTTTCAACAGAGAAAACACTGACGGAAAACTGCAAATCTTCACTCAAATCGAGAAGAACAAGGACTACAACGGATCTATAGTTGCAAATTCTATGTCCATGAGTGATATAAGGGAGGTTGGGAGGGATTTGAGGACTGATATGCAAGGGGAGGGGATAGAGACAGTGTTTTTTGAAAGGTTATCGGCGTACTGTAATAATATTCCGGCCGTATGA
Protein Sequence: MEGIHVAVDESGEPYEQTLLPHLTVENGHVHQEHVRSWYLRNGASPGAVSPLCACGGAGYCPACTHPSPPPLHPAITPQNHPPNNETAPEATQTSQTTQPSQTTQSSQTYVSQTSQTQTIIRPTSPATSLASSHTTSQVTQPQATDSQRSIEAKEEALQRMFDTNEEETSHPTFPVTEILGIASGLDLKDEDAAKGKSDKKKPKSFECPHCRRVFQHRNSLLYHILMHSEKQQVCRECGKGFYTASALKIHKRVHSDDRPCKCDECGREFRQWSDLKYHKASIHSSKKQFKCEFCDKEFARRYSLNVHRRIHTGEKNYKCDFCSKTFRASSYRLSHMRTHTGSKPYKCTQCDKCFRVSYDLRRHMLIHDKVRVRLEDHKGNIKEGKHKKPSVDIKLEHNPEKKPKSPQNVEKKQDVRLPILKSLLDKKQPKSKKSPKKPPNVTVQNKEGHFKMNIDAFESRQEQYILSDYKHKVSEDIVRLQERNDEKELRTYLRSSKNQQICDIVDSDRLVFNRENTDGKLQIFTQIEKNKDYNGSIVANSMSMSDIREVGRDLRTDMQGEGIETVFFERLSAYCNNIPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00353424;
90% Identity: iTF_00353424;
80% Identity: -