Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979651.1:7229837-7232799[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.26 16 6.8 0.0 2 22 92 112 91 114 0.89

2 16 0.12 7.6 7.8 0.2 2 23 137 158 136 158 0.96

3 16 0.018 1.1 10.4 0.1 1 23 162 184 162 184 0.97

4 16 0.015 0.94 10.7 0.1 1 23 189 212 189 212 0.94

5 16 0.085 5.2 8.4 3.2 1 23 219 242 219 242 0.94

6 16 0.00044 0.027 15.5 2.9 1 23 249 272 249 272 0.98

7 16 0.00015 0.0092 17.0 4.1 2 23 279 300 278 300 0.97

8 16 3.8e-06 0.00024 22.0 3.5 1 23 306 328 306 328 0.98

9 16 5.5 3.4e+02 2.7 0.0 2 22 441 461 440 463 0.86

10 16 0.017 1 10.6 1.5 3 23 487 507 486 507 0.98

11 16 0.011 0.7 11.1 0.1 1 23 511 533 511 533 0.98

12 16 0.09 5.5 8.3 0.2 1 23 538 561 538 561 0.91

13 16 0.76 46 5.4 4.6 1 23 568 591 568 591 0.95

14 16 4.6e-06 0.00028 21.8 1.4 1 23 598 621 598 621 0.98

15 16 0.001 0.061 14.4 3.3 2 23 628 649 627 649 0.97

16 16 5e-06 0.00031 21.7 6.0 1 23 655 677 655 677 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.26	16	6.8	0.0	2	22	92	112	91	114	0.89
2	16	0.12	7.6	7.8	0.2	2	23	137	158	136	158	0.96
3	16	0.018	1.1	10.4	0.1	1	23	162	184	162	184	0.97
4	16	0.015	0.94	10.7	0.1	1	23	189	212	189	212	0.94
5	16	0.085	5.2	8.4	3.2	1	23	219	242	219	242	0.94
6	16	0.00044	0.027	15.5	2.9	1	23	249	272	249	272	0.98
7	16	0.00015	0.0092	17.0	4.1	2	23	279	300	278	300	0.97
8	16	3.8e-06	0.00024	22.0	3.5	1	23	306	328	306	328	0.98
9	16	5.5	3.4e+02	2.7	0.0	2	22	441	461	440	463	0.86
10	16	0.017	1	10.6	1.5	3	23	487	507	486	507	0.98
11	16	0.011	0.7	11.1	0.1	1	23	511	533	511	533	0.98
12	16	0.09	5.5	8.3	0.2	1	23	538	561	538	561	0.91
13	16	0.76	46	5.4	4.6	1	23	568	591	568	591	0.95
14	16	4.6e-06	0.00028	21.8	1.4	1	23	598	621	598	621	0.98
15	16	0.001	0.061	14.4	3.3	2	23	628	649	627	649	0.97
16	16	5e-06	0.00031	21.7	6.0	1	23	655	677	655	677	0.97

Sequence Information

Coding Sequence: ATGAAAAAAGATTATAGATGGAATTTAGATGCGAAATGTTTTCGAATTTCTGAAAAGCATCGAAAGAATCTGTTCGAGATACTGGTAAACTCTAACGCAACGCCGATTAAGAAAAAATTGGATCAAGGATACGAGTGCTTTTTTTGCTCTCTTGCGTGTCCGGAACCTGGCGACTTAAAATTCCATACCCTACAAGATCATGATGAGGATTTTATAAGGAAAGTCGTTAAGGATTTGAGGGTTTACGCTGTTAAACTCGACATAACCGGCTTGCAATGTTCGATTTGCGAAACCTACATATCTACTCTGGAACAGCTCATGGAGCATTTGGTCGCAGCGCACGAGCGGACCATATACAAGGATATTAAAAATCAACTGGTGCCGTTTAAGTTCGAAGGAGACGAGCTGCAATGTGCTCTATGCCCGACCAAAAGCGCAAGTTTTAAGAGTTTAACGGGCCACATGAATGGTCATTACAATAACTTTAACTGCAAAGTCTGTGGGATGGGCTTCATTAACGATAATATTCTACGAAGCCATGTAAGGATACACAAGACAGGGAGTTTCCCGTGTGACCTCTGTCCTAAAGTTTTTGATACGCTCGTGAGGAAAAAAGCTCATGTGAACGTAACGCACAAAAAATCCAGCAAGAATCATAAGTGCGGGTACTGCAATGAGTTCTTCAATGACTCTCACAAGAAAGCATTACATTTGAATGAGGCGCATGGCGAGAAATTGTTAACATTCAAATGCAACGCATGTGACAGAATTTTTGATAGGCACAGCCGTTTGAGAACTCACGTAAGAAAGATTCATATGTTGGAGAAGACGGTTCAATGCGAGCATTGTGATAAGAAGTTTTTCTCTCGCACACATTTGGCGGAGCATATGGTGAAGCATACGGGAGAGCGAAACTACTGTTGCAAGTTGTGTGGGAAGGCTTTCGGCAGGAGATTTACTCTCAGACAACACATGAGGGTACACACGAAAGAATGTCGAAAAGTCAAGAATGAATTGCCAAAATATTTTGTCACCACGGATTCGGGCAGTGAAACTGACTTGCAATGGAATTTAGACGAGGAATGTGTTCGAGATTCTGAGAAGCATAGAAAGAATCTGTTTGAGTTACTGATAAACTCTAACGCAACTCCCATCAAGACACGAGTGGACCAGGGATACGCTTGTTTGTTTTGCGTTGTCGCATGTACGGAACCTTGGGATTTAAAGTTTCACACCCTTCAGGTCCATGACGAGGATGCTATTAGCAAAGTGGTCACGAATTTGAAAGTTTACACTGTTAAAATTGATATAACCGGCTTGCAATGTTCGATTTGCGAAAGTGATATGTCTACACTGGAACAACTAATGGAGCATTTGGTCGCAGCTCACGAGCGGACTATATACAAAGACATAAAAAGTCAACTGGTGCCGTTTAAGTTCGAAGGAGACGAACTCCTATGTGCTCTATGCCCCACAAAATGCGCGAGTTTAAGGAGTTTAACGAGCCATATGAACAGTCATTACGATAACTTTACCTGCGAAGTCTGTGGGATGGGCTTCATTAACGATAATATTCTACGAAGCCATGTGAGGATACACAAGACAGGGAGTTTCCCGTGTGACCTCTGTCCTAAAATTTTTGATACGCTCGTGAGGAAAAAAGCTCATGTGAGCGTAAAGCACAAAAAATCCAACAGAACTCACAAGTGCGGGTACTGCAGTGAGTTCTTCATTGACTTCCACAAGAAAAAAGTACATTTGAAAGAAGTGCATGGCGAGAAGTTGTTAACATTCAAATGCAATGTGTGTGATAGAATTTTTAATACGACCACCCTTTTAAAGACTCACATAAGGAAGATACACATGTTGGAGAAGACGGTTCAATGCGAGCGTTGTGATAAGAAGTTTTTTTCTCGCAAACATATGGCGGACCATATGCTGAAGCATACGGGAGAGCGAAACCACCATTGTAATTTGTGTGGGAAGGCTTTCAGGAGAAGATTTACTCTCAAACAACACATGAGGGTGCACACTAAAGAACGTCAGAAGGTCAAGAGTGAATCGCCAAAATATTTTGTCACCACGGATTCGGACAGTGAAAAAGAGTAG
Protein Sequence: MKKDYRWNLDAKCFRISEKHRKNLFEILVNSNATPIKKKLDQGYECFFCSLACPEPGDLKFHTLQDHDEDFIRKVVKDLRVYAVKLDITGLQCSICETYISTLEQLMEHLVAAHERTIYKDIKNQLVPFKFEGDELQCALCPTKSASFKSLTGHMNGHYNNFNCKVCGMGFINDNILRSHVRIHKTGSFPCDLCPKVFDTLVRKKAHVNVTHKKSSKNHKCGYCNEFFNDSHKKALHLNEAHGEKLLTFKCNACDRIFDRHSRLRTHVRKIHMLEKTVQCEHCDKKFFSRTHLAEHMVKHTGERNYCCKLCGKAFGRRFTLRQHMRVHTKECRKVKNELPKYFVTTDSGSETDLQWNLDEECVRDSEKHRKNLFELLINSNATPIKTRVDQGYACLFCVVACTEPWDLKFHTLQVHDEDAISKVVTNLKVYTVKIDITGLQCSICESDMSTLEQLMEHLVAAHERTIYKDIKSQLVPFKFEGDELLCALCPTKCASLRSLTSHMNSHYDNFTCEVCGMGFINDNILRSHVRIHKTGSFPCDLCPKIFDTLVRKKAHVSVKHKKSNRTHKCGYCSEFFIDFHKKKVHLKEVHGEKLLTFKCNVCDRIFNTTTLLKTHIRKIHMLEKTVQCERCDKKFFSRKHMADHMLKHTGERNHHCNLCGKAFRRRFTLKQHMRVHTKERQKVKSESPKYFVTTDSDSEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -