Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979653.1:3178991-3184057[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.11 6.6 8.0 4.8 1 23 220 242 220 242 0.99

2 11 9.1e-05 0.0056 17.7 0.6 1 23 248 270 248 270 0.98

3 11 4.4e-06 0.00027 21.8 0.5 2 23 277 299 277 299 0.96

4 11 0.0086 0.52 11.5 4.4 1 21 305 325 305 327 0.95

5 11 6.7e-05 0.0041 18.1 2.5 1 23 333 355 333 355 0.99

6 11 8.3e-05 0.0051 17.8 2.8 1 23 361 383 361 383 0.97

7 11 0.0014 0.086 14.0 0.4 1 23 391 414 391 414 0.98

8 11 3.2e-05 0.002 19.1 1.6 2 23 421 442 420 442 0.97

9 11 0.0088 0.54 11.5 1.3 1 23 448 470 448 470 0.98

10 11 2.1e-05 0.0013 19.7 2.9 1 23 476 498 476 499 0.95

11 11 8.2e-05 0.005 17.9 7.0 1 23 513 535 513 535 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.11	6.6	8.0	4.8	1	23	220	242	220	242	0.99
2	11	9.1e-05	0.0056	17.7	0.6	1	23	248	270	248	270	0.98
3	11	4.4e-06	0.00027	21.8	0.5	2	23	277	299	277	299	0.96
4	11	0.0086	0.52	11.5	4.4	1	21	305	325	305	327	0.95
5	11	6.7e-05	0.0041	18.1	2.5	1	23	333	355	333	355	0.99
6	11	8.3e-05	0.0051	17.8	2.8	1	23	361	383	361	383	0.97
7	11	0.0014	0.086	14.0	0.4	1	23	391	414	391	414	0.98
8	11	3.2e-05	0.002	19.1	1.6	2	23	421	442	420	442	0.97
9	11	0.0088	0.54	11.5	1.3	1	23	448	470	448	470	0.98
10	11	2.1e-05	0.0013	19.7	2.9	1	23	476	498	476	499	0.95
11	11	8.2e-05	0.005	17.9	7.0	1	23	513	535	513	535	0.98

Sequence Information

Coding Sequence: ATGAAAGAAAAGACAACAAACAACAGCTCGTGGCGGTGCCTGACTGCGACGAAGAAGAATAATTCTATGAGAAGGAAGATAATAAAGAGGATTGACTTACAGTCAATGCTGAAAGGCGCAGGTACTACCAGTCCTAACAATAGCAAGGCTCAGCTAAAGTCTTATTTGGACAGCTTGGACACTTTTGAGCGGGACACAGATGCAAATGGCGCGATTACGGTCAATGGTAATAGCGAGGAGGCTGATGCAGAAGTTACCATCTTCATGGACGAAGAAGGTCGCTACTATTACCAACAATCTGGAGAAAACCAAGACATTGACCCCCTTAATTGTGAAGAATATCAAGGCAATCCCGAGGCCACACAACAGGACCAGGTTTTAGTAGGAGGGGAGGGCTGTCAAACTGTAACATTGGTGCCCTATGCAGATGGTGCTGAGTCATGCTACATAATGGTCGTGCAAGAGGGACCTAAGCCTGTGATGGACATTAATATTAAGACCAATCAGGATGAAGACAAAAGCAGTGAAGTATACAATGTTGATGAAGAAAAAGAGGAAGCTGGTCCGGAAGCAGTCGCTGATGATAAGGATTCAAtagaaaactttttaaaatcagCTTCGGTTGTGGAGCCTACTGAAAGGGTCGAAAAAAAACTGTTCCGGTGCAGTTACTGTCCTTACAAAAGCCACAGGCGGTACATTTTGTTGCGCCACTTGAAGACCCACTCCAGTGAGAGGCGGCATAAGTGCGAGGTTTGCGAGCGTGGCTTCAAGACTGTAGCCTCGCTGCAGAACCACGTGAACATACACAACGGTGTCAAACCAAACGTGTGCAAGTACTGCGAGAAGCGTTTCACTACATCCGGGGAGCTCGTGCGCCACGTCCGGTACATACACACTCATGATAAGCCACACAAGTGCAAGGAATGTGACTATGCTTCTGTGGAGCTGTCCAAACTGAAGCGCCACATGCGCTGCCACACGGGTGAGCGCCCGTACCAGTGCCCCCACTGCACGTATGCTTCTGCAGATACCTTCAAGCTGAAGCGCCACATCCGCACACACACCGGTGAGAAGCCGTACATGTGTGACATCTGTAAAATGTGCTTCAGTCAGTCAAACTCCCTCAACACTCACAAACTCATACACAATGTGTCCAAGAAGCCCATATTTCAGTGCGAGCTTTGTCCAACAAAATTGGGTCGAATAACAGATCTACGTAACCACATGAAGAAAATTCACTCTACTGACACACCGCTGAAATGCAAAAAGTGTGGCAAATTATTCCCAGATCGATATTCCCTTAAAGTGCACAACAAGACCCACGAGGGTGAAAAGTGTTTCAGATGCGAGTTTTGCCCGTACGCCTCGACTGCACTACGTCACCTCAACTCTCACCTGCTCACACATACAGGGGAAAAGCCTTTTGTCTGTGATCAGTGCGACCAGTCCTTTAGGCAGAAGCAACTGTTGCGGCGCCATGAAAACCTGCATCACAATCCCAACTATGTACAGAAGCCTGCTTTAAAGAAAGCTCACACTTGCCACGAATGTAACCGGACATACGCTCACAAGGGCAATCTGATCCGCCACTATACCACACACAATGTCAACTCCAGCGACAACGAGAGAGCAGCAGCCCTTAAATTGTGTCCGAAGAAAATCAATTCTGCGGATGGAAGTGCTGATTCCGACAATACCCTTGTGCATATACAGAATCTGGAAGGTAGTAAGGTGGAAGGCAGCAAGCTTGTGATGGTGGAAAGCAGTGACGGGCAGTACATAGTGGTGGAGGTAATCCAGGAAGTTGATGAACAGCAGCACAAGTCGGTGGCCATCTATGCCGATGATGTAGAAGAATACGCAGAagacgataataataataatgagatTCACTTGCATTCAATGCACAAAGGTATCGACCGAACAGTCAAGCTTGAAATAGATCTTGATACTTGCTTTGGGTTTGATGAGGAATACTTAGATGAGGAATAG
Protein Sequence: MKEKTTNNSSWRCLTATKKNNSMRRKIIKRIDLQSMLKGAGTTSPNNSKAQLKSYLDSLDTFERDTDANGAITVNGNSEEADAEVTIFMDEEGRYYYQQSGENQDIDPLNCEEYQGNPEATQQDQVLVGGEGCQTVTLVPYADGAESCYIMVVQEGPKPVMDINIKTNQDEDKSSEVYNVDEEKEEAGPEAVADDKDSIENFLKSASVVEPTERVEKKLFRCSYCPYKSHRRYILLRHLKTHSSERRHKCEVCERGFKTVASLQNHVNIHNGVKPNVCKYCEKRFTTSGELVRHVRYIHTHDKPHKCKECDYASVELSKLKRHMRCHTGERPYQCPHCTYASADTFKLKRHIRTHTGEKPYMCDICKMCFSQSNSLNTHKLIHNVSKKPIFQCELCPTKLGRITDLRNHMKKIHSTDTPLKCKKCGKLFPDRYSLKVHNKTHEGEKCFRCEFCPYASTALRHLNSHLLTHTGEKPFVCDQCDQSFRQKQLLRRHENLHHNPNYVQKPALKKAHTCHECNRTYAHKGNLIRHYTTHNVNSSDNERAAALKLCPKKINSADGSADSDNTLVHIQNLEGSKVEGSKLVMVESSDGQYIVVEVIQEVDEQQHKSVAIYADDVEEYAEDDNNNNEIHLHSMHKGIDRTVKLEIDLDTCFGFDEEYLDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -