Cgly022572.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- -
- Assembly
- GCA_963855885.1
- Location
- OY979651.1:7566892-7572548[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 0.067 4.1 8.7 1.9 3 23 59 80 58 80 0.92 2 36 7.3 4.5e+02 2.3 0.1 2 23 107 129 106 129 0.94 3 36 0.1 6.1 8.1 2.3 3 23 153 173 152 173 0.97 4 36 0.58 35 5.7 2.9 1 21 177 197 177 200 0.90 5 36 2.4 1.5e+02 3.8 0.3 3 22 206 225 205 225 0.94 6 36 3.5 2.2e+02 3.3 1.2 1 23 232 255 232 255 0.86 7 36 0.003 0.19 12.9 0.3 3 23 297 318 296 318 0.94 8 36 0.26 16 6.9 0.1 2 23 345 367 344 367 0.95 9 36 0.0015 0.094 13.8 0.2 3 23 392 412 390 412 0.95 10 36 1.1 67 4.9 2.0 1 23 416 439 416 439 0.95 11 36 0.005 0.31 12.2 1.0 1 23 501 524 501 524 0.88 12 36 3.4 2.1e+02 3.3 5.5 2 23 530 551 529 551 0.94 13 36 4.5e-05 0.0027 18.7 1.3 1 20 557 576 557 579 0.94 14 36 0.00033 0.02 15.9 1.0 1 23 585 607 585 607 0.95 15 36 0.029 1.8 9.8 0.3 3 23 661 682 660 682 0.94 16 36 0.94 58 5.1 0.3 2 23 709 731 708 731 0.93 17 36 0.00058 0.035 15.2 0.7 3 23 756 776 754 776 0.95 18 36 0.87 53 5.2 1.9 1 21 780 800 780 803 0.94 19 36 6.5 4e+02 2.4 0.3 3 22 809 828 808 828 0.91 20 36 0.092 5.6 8.2 2.9 1 23 835 858 835 858 0.95 21 36 0.0014 0.084 14.0 0.5 1 23 865 888 865 888 0.93 22 36 0.11 6.9 8.0 3.4 1 23 893 915 893 915 0.95 23 36 1.3e-05 0.0008 20.4 1.1 1 20 921 940 921 943 0.94 24 36 1.7 1e+02 4.3 0.1 1 13 949 961 949 964 0.92 25 36 0.0047 0.29 12.3 1.8 3 23 989 1010 988 1010 0.96 26 36 1.3 77 4.7 0.1 2 23 1035 1057 1034 1057 0.95 27 36 0.34 21 6.5 0.4 2 23 1081 1102 1080 1102 0.96 28 36 0.00021 0.013 16.5 0.5 1 21 1106 1126 1106 1127 0.96 29 36 0.39 24 6.3 0.1 1 23 1168 1191 1168 1191 0.95 30 36 0.73 45 5.4 0.4 2 23 1217 1239 1216 1239 0.95 31 36 0.011 0.67 11.2 0.6 2 23 1263 1284 1262 1284 0.95 32 36 0.00058 0.036 15.2 0.0 1 23 1288 1311 1288 1311 0.97 33 36 0.051 3.1 9.1 0.5 1 23 1315 1338 1315 1338 0.97 34 36 8.3 5.1e+02 2.1 0.3 1 23 1343 1368 1343 1368 0.89 35 36 0.00059 0.036 15.2 2.7 1 23 1377 1400 1377 1400 0.97 36 36 0.0048 0.29 12.3 1.5 1 23 1410 1433 1410 1433 0.95
Sequence Information
- Coding Sequence
- ATGAAGAGCATTACGTCATACGTGCCAGAAGAGCTGTTAAGTCAACAAGAGATTTCTTCTTTTCTAGCCAAGGAGCCAGTCACTAGCATACAGAAGGCGAAGCGAAACGCGGAGTTAGTGTTGGAATACTCGACCGTATATCCCTTCAGAATTCGCGGCAAAGATATCATACTTTGCGTGTACTGCCACGAAGAGTGCTCCGATCCGAAAGACTATAGACGCCATATCGACGATAACCACAAAACCTTCACCGTATCCACTGCGTTTGCGCACTGCGGGAGCGGCAAGGATTACTTAAAAGTAGATCTCACCGACCTCAAATGCAGGTTATGCTCAATACCGTGTGAAAGCTTGGAAGAGATTGCGTTACATATCCGCGATATCCACAAAGTATCTATCGATCCGGATTTCGATATCGGCATGCATCCTTACCGTCTCGATAGCGATAAATGGCTCTGCACTCTTTGCGATAAGAGACTCGCCTCGCTCATCCAACTCTGTCGACACACGACCTCGCACTACCAGAAATACACTTGTGATGTATGCGGGCGCATGTATTTGACGGAAAACGCTTTGAAACACCACAACCGTTGTACTCATTCCGGCAGTAACATGTGCAGGAAGTGCTGGACTGAGTTCCCGACGCTGGAAATGAAGAGGGAGCATATTAAAACGTCTAAACCTTGCTGGCCGTTCTGTTGTACCGCGTGCGGGGAGCGGTTCGTCTCTGGGGAAAAGAGACAGACGCATCTCACCGACGTGCACGGTCTGGAGAGAGAGAGCACCACGGAGCCGCTCAGTAGCCTTCGGATGGCGAAACAAAACGCGGAACTGTTGTTGGCATACTCGACCTTGTACCCGTTCAGAATGCGCGCCAAAGATATACTCTGCGTCTACTGTCGCGAAGAATTCACTGACCCCAATAACTTCCGTAACCATATGGACGAGTACCACAAAACGGTGACTGTCACCGACGCGTTCGCACACTGCCCGAGCGCAAAAGACTCTTTAAAAGTAGACCTAACTAACCTCAAATGCAGGATATGTTCCGCATCGTGTGAAAACTTGGACGAGATCGCCGCGCACATTCGCGACGCACACGCCATTTCGCAGATCAATACGGATTTCGATCTCGGCTTGCATCCGTACCGTCTGAATAACGAGAAATGGATTTGCGCCGTATGCGACAAGAAATTCGCTTCGCTAATCCAACTCAGCAGGCACACCACCTCCCACTATCACAAATACTCTTGCGGCATCTGTAATCGCACGTATCTAACTGCTCAGGCGTTGAAATGCCACACACGGTCCAGTCATTCGGGAGGCAATGTGTGCAGGAAGTGTTGGGCCGATTTCCCGACGCTGGAATTGAAGAGGGAGCATGTTAAAACGTCTAAATCTTGCTGGCCGTTCTGTTGTACCGCGTGCGAGGAGCGATTCGTCTCTGGCGAAAAGAGACAGACGCATCTCATCGACGTGCACGGTCTGGAGAGAGAGCAGTACGAGTGTCCTGATTGTGATCTGACTTTCAAATCTCGACGGCCCTTCTACAACCACTTTACGCTAGTCCACAGCGACAACAGCGTCAAATGCCCGTGTTGCCACCTCAGATTCACCTCCCAAAAACAAATGGAGGAACACAAGTTCAGTCACACCGGCAACAAGCCCTTCCGTTGCGATGTGTGCTCGAAAACTTTTTCGAGAAGGAAAAATTTGTATCAGCACATTTGGATCCACAGCGAGAACAAACGTTTCCTTTGCGTCGTCTGTAAGAAGCAGTTCGCTCAGAAAGTCAGCCTCACCAGCCACTTGAGGTACCATCCCAAATTAGTCCCAGAAGAGTTAAGTCAacaggattttttttcttttctagcCACGGAACCGGTCAGTAGCATACAGAAGGCGAAACAAAATGCAGAGTTAGTCTTGCAATACTCGACCGTGTATCCCTTCAGAATACGTCGCGGTAAAGATTTGCTCTGCGTCTACTGCCACGAGGAATATTCAGACCCGAACGACTATCGGGACCATATGGACGAATACCACAAATCGTTCACAGTTTCTACCGCGTTCGCGCACTGTGCCAAAGGGAAAGATTACTTAAAAGTGGACCTCACTAACCTCAAATGTAGAATATGCTTCACGCCGTGTGATAATTTGAAAGAGATCGCCGCGCACATTCGCGACGCGCACGGAATGGCTCAAATCAATACGGATTTCGACATCGCAATGCACCCGTATCGTTTGGATGGCGATAAATGGATCTGCGCTCTTTGCGATACCAAATTCGCGTCGCTCGCACAACTCTGCAGGCACATGACCTCTCACTATCAGAAATACACTTGCGACGTGTGCGGGCGCTTGTATTTGACCAATGAGGCGTTGAAGTACCACACTCGTTGCAGTCACTCCGGAGGTAATTCGTGCAGGAAGTGTTGGACTGAATTCCCGACGCTGGAAATGAAGAGGGAGCATGTTAAAACGTCCAAATCCTGCTGGCCGTTCTGTTGTACCGCGTGCGGGGAGCGGTTCGTTTCATGGGAAAAGAAACAACATCATCTCAAGGAAGTGCACGGCCGAGAGCAACGGGCGTATCCGTGTCCCGACTGTGAGCAAGTTTTCAGCAGTCGGAAACCGTTCTACAGACATTACACTTTAGTGCACAGCGACAACTGCTACAAATGTCCGTGTTGCGATCTTAAATTCAGCACCAAGAACCAAATGGAGGACCACAGATTCGGGCACACGGGCGAGAAACCGTTTCGTTGCGACGTGTGCTCGAAAACGTTCTCCAGGAAGAAAAACCTCGAACAGCACCTGTGGATCCATAGAGAAAATAAACGTTTCGTGTGCCTTATTTGTGAGAAGCAGTTCGCACAGAAGACGCCGCAGCGGCGTAACGCGGAACTAATACTCAGACATTCCACCGCCTACCCGTTTAAGACGCGATTTAGTCAGATACTGTGCGCCTTTTGCCACGAGGAATACGCTACCCTGTCCAGTTTGCGGCATCATATGCGAGCGGACCACGTCGACACGGACTTTAAAAACGTTTTCTATAGAGCGAAGGATAATCTCATCAAAGTGGACATAACTGATTTGAAATGTAATATATGTCGGCAAGATATAACGGATGTCGATACGTTGATGGGTCACTTGTCTAGAGAGCACAATAAGCCCGTTAGGTTCAACGCGCGGTTTGGTGTTCTGCCTTACAAACAGGACGCTGTCGAGCGGTGGGTGTGCGTGTACTGTCAGAAGACGTATCTAGAGTTCATACAGTTCAAGCGGCACATAGCTACGCATTTCATGAACTTCAGTTGCGACAAATGCGGCACAACTTTTATTTCCGAGCACGCGTTACGAGATCATCTGCGGCAAGTGAAATGCTTTAGGACTGCGTACAAACCGCGGAACGGGAGGGTGTTGAAGCCGCGAACTAATGCCGAGATAATTCTCCAGTGCTCCACGGCTTGTCCATTCAGGACGTGGAAGAGCAACTTCAGCTGCGTGTTCTGTAGGGTTCAGTCCGGCGACCCGAGTACTCTGCGAGCGCATATAGTCACTAGACACGAGAATTATGACGTGCAAGCTGCGTTCTATAAAAAGCTGGGTAAAGAGTTCCTCAAGATCGATATAACGGATCTGCAGTGCAAACTGTGCTTCATGCCGATTGAGAATTTCGAAAATTTAACGTACCATCTGAAGAACGATCACCAACAGCCGATCAACTCGGATGCCCAGTTGGGAGTTCTGCCTTTCAGACTGAACGACGGATCGATATGGAAATGCACGATGTGCCCTAACGAGTTCAAGGATTTCGTCTCCCTTAATAAACACACTTCAGAGCATTTCCAGAATTATGTTTGCGATACTTGCGGCGAGGGTTTCATTACGGAATCCGCTATGATCGCCCACACGAAGGTACCGCACGAAAACAAGTACAACTGCAGTCGATGTGTGGCGACGTTCTCGACTCTCGACGAGCGGAATGTGCACGTAAAAACACAACACACTTCTACACCCTACATGTGCGTGTACTGCAAGGACAAGCCGCGGTTCGCGAACTGGGAGTTGCGGAAGAAACATCTGATGGAAGTCCACAACTATAAGACTGGAGCCGATAAATACGAATGCACGACCTGTCAGAAGTCCTTCAAAACTCGCTCGGGGAAGTACAACCACATGGCGAGGACTCACAGGCTGAAGAAGGACACGGAGTTGAACTATCCGTGCCACAGCTGCCCGAAAGCTTTCACTACGCAACTGTTCTTGGATAAGCATGTTGCGAAAAAACACTTCGACGTCTGA
- Protein Sequence
- MKSITSYVPEELLSQQEISSFLAKEPVTSIQKAKRNAELVLEYSTVYPFRIRGKDIILCVYCHEECSDPKDYRRHIDDNHKTFTVSTAFAHCGSGKDYLKVDLTDLKCRLCSIPCESLEEIALHIRDIHKVSIDPDFDIGMHPYRLDSDKWLCTLCDKRLASLIQLCRHTTSHYQKYTCDVCGRMYLTENALKHHNRCTHSGSNMCRKCWTEFPTLEMKREHIKTSKPCWPFCCTACGERFVSGEKRQTHLTDVHGLERESTTEPLSSLRMAKQNAELLLAYSTLYPFRMRAKDILCVYCREEFTDPNNFRNHMDEYHKTVTVTDAFAHCPSAKDSLKVDLTNLKCRICSASCENLDEIAAHIRDAHAISQINTDFDLGLHPYRLNNEKWICAVCDKKFASLIQLSRHTTSHYHKYSCGICNRTYLTAQALKCHTRSSHSGGNVCRKCWADFPTLELKREHVKTSKSCWPFCCTACEERFVSGEKRQTHLIDVHGLEREQYECPDCDLTFKSRRPFYNHFTLVHSDNSVKCPCCHLRFTSQKQMEEHKFSHTGNKPFRCDVCSKTFSRRKNLYQHIWIHSENKRFLCVVCKKQFAQKVSLTSHLRYHPKLVPEELSQQDFFSFLATEPVSSIQKAKQNAELVLQYSTVYPFRIRRGKDLLCVYCHEEYSDPNDYRDHMDEYHKSFTVSTAFAHCAKGKDYLKVDLTNLKCRICFTPCDNLKEIAAHIRDAHGMAQINTDFDIAMHPYRLDGDKWICALCDTKFASLAQLCRHMTSHYQKYTCDVCGRLYLTNEALKYHTRCSHSGGNSCRKCWTEFPTLEMKREHVKTSKSCWPFCCTACGERFVSWEKKQHHLKEVHGREQRAYPCPDCEQVFSSRKPFYRHYTLVHSDNCYKCPCCDLKFSTKNQMEDHRFGHTGEKPFRCDVCSKTFSRKKNLEQHLWIHRENKRFVCLICEKQFAQKTPQRRNAELILRHSTAYPFKTRFSQILCAFCHEEYATLSSLRHHMRADHVDTDFKNVFYRAKDNLIKVDITDLKCNICRQDITDVDTLMGHLSREHNKPVRFNARFGVLPYKQDAVERWVCVYCQKTYLEFIQFKRHIATHFMNFSCDKCGTTFISEHALRDHLRQVKCFRTAYKPRNGRVLKPRTNAEIILQCSTACPFRTWKSNFSCVFCRVQSGDPSTLRAHIVTRHENYDVQAAFYKKLGKEFLKIDITDLQCKLCFMPIENFENLTYHLKNDHQQPINSDAQLGVLPFRLNDGSIWKCTMCPNEFKDFVSLNKHTSEHFQNYVCDTCGEGFITESAMIAHTKVPHENKYNCSRCVATFSTLDERNVHVKTQHTSTPYMCVYCKDKPRFANWELRKKHLMEVHNYKTGADKYECTTCQKSFKTRSGKYNHMARTHRLKKDTELNYPCHSCPKAFTTQLFLDKHVAKKHFDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -