Cgly003889.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- -
- Assembly
- GCA_963855885.1
- Location
- OY979629.1:2762898-2775289[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 0.0069 0.42 11.8 2.9 1 23 358 380 358 380 0.98 2 32 0.0049 0.3 12.3 6.2 1 23 386 408 386 408 0.97 3 32 0.0049 0.3 12.3 6.2 1 23 414 436 414 436 0.97 4 32 0.0049 0.3 12.3 6.2 1 23 442 464 442 464 0.97 5 32 0.0049 0.3 12.3 6.2 1 23 470 492 470 492 0.97 6 32 0.046 2.8 9.2 5.0 1 23 498 520 498 520 0.96 7 32 0.0049 0.3 12.3 6.2 1 23 526 548 526 548 0.97 8 32 0.046 2.8 9.2 5.0 1 23 554 576 554 576 0.96 9 32 0.0049 0.3 12.3 6.2 1 23 582 604 582 604 0.97 10 32 0.0049 0.3 12.3 6.2 1 23 610 632 610 632 0.97 11 32 0.0049 0.3 12.3 6.2 1 23 638 660 638 660 0.97 12 32 0.0049 0.3 12.3 6.2 1 23 666 688 666 688 0.97 13 32 0.0049 0.3 12.3 6.2 1 23 694 716 694 716 0.97 14 32 0.0049 0.3 12.3 6.2 1 23 722 744 722 744 0.97 15 32 0.0049 0.3 12.3 6.2 1 23 750 772 750 772 0.97 16 32 0.0049 0.3 12.3 6.2 1 23 778 800 778 800 0.97 17 32 0.0049 0.3 12.3 6.2 1 23 806 828 806 828 0.97 18 32 0.096 5.9 8.2 2.3 4 23 837 856 837 856 0.96 19 32 0.0049 0.3 12.3 6.2 1 23 862 884 862 884 0.97 20 32 0.0049 0.3 12.3 6.2 1 23 890 912 890 912 0.97 21 32 0.0049 0.3 12.3 6.2 1 23 918 940 918 940 0.97 22 32 0.0049 0.3 12.3 6.2 1 23 946 968 946 968 0.97 23 32 0.0049 0.3 12.3 6.2 1 23 974 996 974 996 0.97 24 32 0.0049 0.3 12.3 6.2 1 23 1002 1024 1002 1024 0.97 25 32 0.0049 0.3 12.3 6.2 1 23 1030 1052 1030 1052 0.97 26 32 0.0049 0.3 12.3 6.2 1 23 1058 1080 1058 1080 0.97 27 32 0.0049 0.3 12.3 6.2 1 23 1086 1108 1086 1108 0.97 28 32 0.0049 0.3 12.3 6.2 1 23 1114 1136 1114 1136 0.97 29 32 0.046 2.8 9.2 5.0 1 23 1142 1164 1142 1164 0.96 30 32 0.0049 0.3 12.3 6.2 1 23 1170 1192 1170 1192 0.97 31 32 0.0049 0.3 12.3 6.2 1 23 1198 1220 1198 1220 0.97 32 32 0.0017 0.11 13.7 0.5 1 22 1226 1247 1226 1247 0.94
Sequence Information
- Coding Sequence
- ATGTCCACAAGCTGGATTTACACCTTAAATAAACAAGAATTAATAAGAGAACTCGAAAATCGAGACATAGAAACAACATCTACTAGCACAGTTGacgaattaagaaaacaactgtcAAAAGCGATCAAAACAAAAGAAGGAACAACGCAAAAGAGCAAAATGGGTGAAGAAAACGAAATAAGAGAATTCGATAAGGCAATATCAAGATGGAAAATAGGATTTGATACCTGGGGAGACCCCATCGAGTTCTTAGAGAGATTGGAAGAGTTAGCAGACACTCTAAATGTCAATAAAGACAAAGTCTTACACTTAGTACCCAGATGTTTAAGGGGAAGAGCATCCTTATGGTATCGGAACAACAGTCAAAGTTGGGCAACGTGGGAAGACTTCATAGACTGTTTCAAGCTATATTATTATCCtcgaaattacgaaaaaaaTTTATCAGAGAGAATAATTAACAGGAAACAAGGATTCAAGGAAAAATTTGTGAATTACCTAACTGATATACAAACATTGATGAGAAGACACGGAAAATTAAACCAGGAAGAGCAACTTGAACGAATCTACGACAATATGAAACCCAACTATCAATTCtacataaaaagaaaagatttcaACTCCGTCGGAGAACTAATCAAACTAGCAGGGGATTATGAGAAGATAAATATGGATCGCTACAAAGAAACACAGAAAAACCCAGAGTATAAATATAGGGGACAACAAAAAGAACATAAAGTAAATTCAGAACAAATAACAGAGAAAAAACTAGTAACGGCAGACTACAATAAGAGAACATCCTGCTGGAAGTGCGGGAAAAGAAACCACTCAACGGATGAATGTAGAAGTAAACCAGTAATTTTCTGCAACCAATGTGGCACACTCGGCAAACTCACCAAAAATTGCTGTCCAACGACATCATACAAACCAAAGAACACATTACAAAAAACAACAGAATCAGATATGAAAAAAGACAAACGCATTTTCATACCGGAAAAAATAAACGAACAAGTAGAGAAGATGTTAGAAGAAGGAATCATAGAAAAATCAAACAATCACACGGGCGAGAAGCCGTACCAGTGCGCGCTGTGTCCGCGCAGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCGCGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCGCGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTACCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCGCGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGcacgccctcgaccgcgcgcacTCGTGCCCCAAGTGCGACAAGCGGTTCACCACGTCCTCGCAGCACAGGCTGCACGCGAGGCGGCACGCGCTCGACCGCGCGCACTCGTGCCCCAAGTGCGACAAGCGGTTCGTATCGCGCAACTCGTGGGCGCTGCACGTGCGGCGCGACGACTGCACCAAGCTCCAGCGACCGACGGAGAATGCCAAACTAATGCCCAAGCAAGTGAGCCTGCTGGTGAGCGACAACACCGCACCGCAGCAACTCCAGCTGCAGCCGCTGCCGCTGCAGCACAAGCCGGGCGCGGAGGCGGACGCCGAGGAGCGCGTCATCTACGTGGCGTACGACGCGGACGACTCGCAGACCGGCGCCTACACCATACTGGACCCTGAACAGGTTAACTTATCACATGCTTGTACGACGCCACTGCAGCAGCAACTCCAGCTGCAGCCGCTGCCGCTGCAGCACAAGCCGGGCGCGGAGGCGGACGCCGAGGAGCGCGTCATCTACGTGGCGTACGACGCGGACGACTCGCAGACCGGCGCCTACACCATACTGGACCCTGAACAGGTTAACTTATCACATGCTTGTACGACGCCACTGCAGCAGCAACTCCAGCAGCAACTGCAGCTGCAGCCGCTGCCGCTGCAGCACAAGCCGGGCGCGGAGGCGGACGCCGAGGAGCGCGTCATCTACGTGGCGTACGACGCGGACGACTCGCAGACCGGCGCCTACACCATACTGGACCCTGAACAGGTTAACTTATCACATGCTTGTACGACGCCACTGCAGCAGCAACTCCAGCAGCAACTGCAGCTGCAGCCGCTGCCGCTGCAGCACAAGCCGGGCGCGGAGGCGGACGCCGAGGAGCGCGTCATCTACGTGGCGTACGACGCGGACGACTCGCAGACCGGCGCCTACACCATACTGGACCCTGAACAGGTTAACTTATCACATGCTTGTACGACGCCACTGCAGCAGCAACTCCAGCAGCAACTGCAGCTGCAGCCGCTGCCGCTGCAGCACAAGCCGGGCGCGGAGGCGGACGCCGAGGAGCGCGTCATCTACGTGGTTTACGACGCGGACGACTCGCAGACCGGCGCCTACACCATACTGGACCCTGAACAGGTACAAGGGGTGAACATAGAGGAGAGCCGCGTTCTATCCAGCTGCCAGCTGTACGGCGCGGGATCCTCACTGCTGGTGCCGCAGCAGCTGCAACCGCTGCAACAGCTGCAGCCGCTGGAGTCCATGAAGCTGGAGACCGAGGAGCTGCATTTGCACATCGAGGAAGAGGAGGAGGAGGATGATCCGATGCCAAACAGAGAGAGCATAGCCGTGACGGACGAGCAAGGCAACCCGCTGCATTTCACGATGCAAGACGGCACCAAGCTGGCCATCACCTCCGTTGACGGCAAGACGTTGCAGGTCATCACACAAGATGGACAGACTATACCCGTGGAGATTAAAGGCTACAACGAccaagaaGTGCACATAACAGAGGGCGCGGCGGAAGCGCCGGCGCAGCAAGTCGTCGTACACAAGTCCGTCGACGCGACGGAGCCGATACACTACTTCATTGTGTAG
- Protein Sequence
- MSTSWIYTLNKQELIRELENRDIETTSTSTVDELRKQLSKAIKTKEGTTQKSKMGEENEIREFDKAISRWKIGFDTWGDPIEFLERLEELADTLNVNKDKVLHLVPRCLRGRASLWYRNNSQSWATWEDFIDCFKLYYYPRNYEKNLSERIINRKQGFKEKFVNYLTDIQTLMRRHGKLNQEEQLERIYDNMKPNYQFYIKRKDFNSVGELIKLAGDYEKINMDRYKETQKNPEYKYRGQQKEHKVNSEQITEKKLVTADYNKRTSCWKCGKRNHSTDECRSKPVIFCNQCGTLGKLTKNCCPTTSYKPKNTLQKTTESDMKKDKRIFIPEKINEQVEKMLEEGIIEKSNNHTGEKPYQCALCPRRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTASSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTASSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSYPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTASSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFTTSSQHRLHARRHALDRAHSCPKCDKRFVSRNSWALHVRRDDCTKLQRPTENAKLMPKQVSLLVSDNTAPQQLQLQPLPLQHKPGAEADAEERVIYVAYDADDSQTGAYTILDPEQVNLSHACTTPLQQQLQLQPLPLQHKPGAEADAEERVIYVAYDADDSQTGAYTILDPEQVNLSHACTTPLQQQLQQQLQLQPLPLQHKPGAEADAEERVIYVAYDADDSQTGAYTILDPEQVNLSHACTTPLQQQLQQQLQLQPLPLQHKPGAEADAEERVIYVAYDADDSQTGAYTILDPEQVNLSHACTTPLQQQLQQQLQLQPLPLQHKPGAEADAEERVIYVVYDADDSQTGAYTILDPEQVQGVNIEESRVLSSCQLYGAGSSLLVPQQLQPLQQLQPLESMKLETEELHLHIEEEEEEDDPMPNRESIAVTDEQGNPLHFTMQDGTKLAITSVDGKTLQVITQDGQTIPVEIKGYNDQEVHITEGAAEAPAQQVVVHKSVDATEPIHYFIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -