Cgly024226.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- ehn-3
- Assembly
- GCA_963855885.1
- Location
- OY979654.1:1805445-1821108[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.004 0.25 12.5 0.4 1 23 44 67 44 67 0.93 2 27 2 1.2e+02 4.1 1.2 1 23 71 93 71 93 0.95 3 27 0.016 0.95 10.7 0.2 1 23 98 121 98 121 0.96 4 27 0.073 4.5 8.6 0.1 3 23 127 148 126 148 0.96 5 27 0.073 4.5 8.6 0.1 3 23 178 199 177 199 0.96 6 27 0.073 4.5 8.6 0.1 3 23 229 250 228 250 0.96 7 27 0.073 4.5 8.6 0.1 3 23 280 301 279 301 0.96 8 27 0.073 4.5 8.6 0.1 3 23 331 352 330 352 0.96 9 27 0.073 4.5 8.6 0.1 3 23 382 403 381 403 0.96 10 27 0.073 4.5 8.6 0.1 3 23 433 454 432 454 0.96 11 27 0.073 4.5 8.6 0.1 3 23 484 505 483 505 0.96 12 27 0.073 4.5 8.6 0.1 3 23 535 556 534 556 0.96 13 27 0.073 4.5 8.6 0.1 3 23 586 607 585 607 0.96 14 27 0.073 4.5 8.6 0.1 3 23 637 658 636 658 0.96 15 27 0.073 4.5 8.6 0.1 3 23 688 709 687 709 0.96 16 27 0.073 4.5 8.6 0.1 3 23 739 760 738 760 0.96 17 27 0.059 3.6 8.8 0.0 2 20 771 789 770 791 0.94 18 27 0.79 48 5.3 1.0 2 23 830 852 829 852 0.96 19 27 0.04 2.5 9.4 0.7 2 23 868 889 867 889 0.96 20 27 0.00045 0.028 15.5 0.1 1 23 895 917 895 917 0.96 21 27 1.3e-05 0.0008 20.3 0.3 2 20 927 945 926 947 0.95 22 27 7.9 4.8e+02 2.2 0.1 7 23 1000 1017 1000 1017 0.91 23 27 7.9 4.8e+02 2.2 0.1 7 23 1040 1057 1040 1057 0.91 24 27 7.9 4.8e+02 2.2 0.1 7 23 1120 1137 1120 1137 0.91 25 27 7.9 4.8e+02 2.2 0.1 7 23 1160 1177 1160 1177 0.91 26 27 5.1e-06 0.00032 21.6 0.1 2 23 1234 1255 1233 1255 0.94 27 27 0.0015 0.089 13.9 2.3 1 23 1261 1284 1261 1284 0.93
Sequence Information
- Coding Sequence
- ATGAGCGGGTATCTTATACCCGACAGCGTGTTAAATGCAGTGAGCGGGTATCTTACACCCGACATCATATTAAATGTTGTGAGCGGGTATCTCACACCCGACAGCGTATTAAATACGGCGGAGGGCGAGTTCGAGTGCCCGGTGTGCCACTTCAAGTTCCCGAGCGCGAAGGTGCTGGAAAACCACCAGGCGGCGCGCCACGCCACCAAGTTCAGCTGCACGCTGTGCGACTTCTCCACCTGCTCCGCCGAGCCCGCTCGACAGCACGGCATGAAACACAGAGGGATCAAGTACCAGTGTCCGTACTGTACGGAGGAATGCGTGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGGTGCGTACACTGTACAGGCGGTACACGGTGCTGATGGACCACATAGCCATAGCGCACACGCCGGAGAGCCTGTGCCCCGTGTGCGGTCTGAAGCTAGCCAGCGACGAGGAGTTGGAGCGGCACAGGAGCGTCAGGCACAAGGACGAGGTTCAGTGGGAGGAAGGCGTGCAGTGTAAGAAGTGTGACGTGGTCTTCGTCGATGAAACGGCGTACCGACTGCATCTGGGAGTCTCCATCAAACACGACAGCGAGTTCATAACAGAGCATATCAAAGCTAAGAAAAATCAAGAGACGGAATTCCTGACAGTGGTCAATAAGATTAAACCAGAAGTGACCGGACCGCTCACGTGCGAACAGTGCGGCATGGAACTGCCCTCGCTGCGCAAGTACCACGCGCACTTCCGGCGCGACCACCCGGACAAGACCAGGACCTTCTACCCCACCATGAAGACCAAGGTCATGTGCGAGCTGTGCGGCAAGTTCCTCAAGGCTCACTGGCAGTACATGGAGCACATGCGGCTGCACACGAACGTGCGTCCGTTCGCGTGCGACGTGTGCGGCAAGGCGTTCATCAACAGCCGGCTGCTGGGCATGCACCAGTACGTGCACgacgcgcgccgcccgcgccccgaCATCCGCTGCAAGCTGTGCGGCAAGAACTTCGCCAACAAGGGCAACCTGCACCGGCACATGGGCGTGAGTCCCCCCGCAGCACTAGTACACGGAGCACACGCGGCTGCACACGAACGTGCGTTCGTACGCGTGCGACGTGTGCGGCAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGCCGTTCACCAAAAGCCGGCTGCTGGGCATTCATCAACAAGCCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGCCGTTCACCAAAAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACGAAAAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCATCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCACCAACAGCCGGCTGCTGGGCATTCATCAACAAGGCGTTCATCAACTAAAAGTCGctttttaaaacctaagttaaaAAATCTAAGTTTAGCGGTTACGCATGTCGAAAATAAGGACGCTCATGCCGTCGCACCCTGGCAGATGAAAAAGTACACTCGGTACAAAGTTGACGAGTGCGACGTTTGTGGCAAGATCTTTGCCAATAGGAGCAATCTCAATCGTCACAAGGGCGTGCACTCGGACGAGAAACGCTTCAAGTGCGAGATATGCAACACGTCGTACCGACAGAAGGCCGAGATGAAGTCCCACTACGACCACGTGCACCTGCGCAAGCCGTGGCCGAAGCGGCACCGCCCGGCCAAGCGGGACGGCTCGATGAAGGCCGAGATGAAGTCCCACTACGACCACGTGCACCTGCGCAAGCCGTGGCCGAAGCGGCACCGCCCGGCCAAGCGGGACGGCTCGATGAAGGCCGAGATGAAGTCCCACTACGACCACGTGCACCTGCGCAAGCCGTGGCCGAAGCGGCACCGCCCGGCCAAGCGGGACGGCTCGATGAAGGCCGAGATGAAGTCCCACTACGACCACGTGCACCTGCGCAAGCCGTGGCCGAAGCGGCACCGCCCGGCCAAGCGGGACGGCTCGATGAGGCAATCCACGGCACCGACGTCGGAAGACGACAACTCGCAGACGGTAATCGAAGAGGTCGTCGAAGAAATGGAAGTGGACTATTGA
- Protein Sequence
- MSGYLIPDSVLNAVSGYLTPDIILNVVSGYLTPDSVLNTAEGEFECPVCHFKFPSAKVLENHQAARHATKFSCTLCDFSTCSAEPARQHGMKHRGIKYQCPYCTEECVRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQVRTLYRRYTVLMDHIAIAHTPESLCPVCGLKLASDEELERHRSVRHKDEVQWEEGVQCKKCDVVFVDETAYRLHLGVSIKHDSEFITEHIKAKKNQETEFLTVVNKIKPEVTGPLTCEQCGMELPSLRKYHAHFRRDHPDKTRTFYPTMKTKVMCELCGKFLKAHWQYMEHMRLHTNVRPFACDVCGKAFINSRLLGMHQYVHDARRPRPDIRCKLCGKNFANKGNLHRHMGVSPPAALVHGAHAAAHERAFVRVRRVRQGVHQQPAAGHSSTRRSPTAGCWAFINKAFTNSRLLGIHQQGVHQQPAAGHSSTRRSPTAGCWAFINKAFTNSRLLGIHQQAVHQKPAAGHSSTSRSPTAGCWAFINKPFTKSRLLGIHQQGVHEKPAAGHSSTRRSPTAGCWAFINKAFTNSRLLGIHQQGVHQQPAAGHSSTRRSPTAGCWAFINKAFTNSRLLGIHQQGVHQQPAAGHSSTRRSSTKSRFLKPKLKNLSLAVTHVENKDAHAVAPWQMKKYTRYKVDECDVCGKIFANRSNLNRHKGVHSDEKRFKCEICNTSYRQKAEMKSHYDHVHLRKPWPKRHRPAKRDGSMKAEMKSHYDHVHLRKPWPKRHRPAKRDGSMKAEMKSHYDHVHLRKPWPKRHRPAKRDGSMKAEMKSHYDHVHLRKPWPKRHRPAKRDGSMRQSTAPTSEDDNSQTVIEEVVEEMEVDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -