Cgly024223.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Coenonympha glycerion
Gene Symbol
-
Assembly
GCA_963855885.1
Location
OY979654.1:1745122-1756950[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.0011 0.07 14.3 1.5 1 23 127 149 127 149 0.99
2 35 1.1 66 4.9 4.9 1 23 156 179 156 179 0.95
3 35 0.00044 0.027 15.5 2.3 1 23 210 233 210 233 0.98
4 35 0.0011 0.068 14.3 0.2 2 23 238 260 237 260 0.95
5 35 0.011 0.65 11.2 0.2 2 23 282 304 282 304 0.94
6 35 0.0015 0.089 13.9 0.3 2 23 326 348 326 348 0.95
7 35 0.0011 0.068 14.3 0.2 2 23 370 392 369 392 0.95
8 35 0.0053 0.33 12.1 1.0 2 23 414 436 414 436 0.94
9 35 0.091 5.6 8.3 0.1 6 23 461 479 459 479 0.94
10 35 0.0065 0.4 11.9 0.1 2 23 501 523 501 523 0.95
11 35 0.0039 0.24 12.6 0.3 2 23 545 567 545 567 0.94
12 35 0.0039 0.24 12.6 0.3 2 23 589 611 589 611 0.94
13 35 3.8 2.3e+02 3.2 0.0 6 21 627 642 624 647 0.90
14 35 2.4 1.5e+02 3.8 0.8 2 23 675 697 674 697 0.94
15 35 1.2 71 4.8 0.1 1 12 713 724 713 727 0.84
16 35 1.2 71 4.8 0.1 1 12 760 771 760 774 0.84
17 35 1.2 71 4.8 0.1 1 12 807 818 807 821 0.84
18 35 2.4 1.5e+02 3.8 0.1 3 12 855 864 854 867 0.88
19 35 1.2 71 4.8 0.1 1 12 900 911 900 914 0.84
20 35 1.2 71 4.8 0.1 1 12 947 958 947 961 0.84
21 35 1.2 71 4.8 0.1 1 12 994 1005 994 1008 0.84
22 35 2.4 1.5e+02 3.8 0.1 3 12 1042 1051 1041 1054 0.88
23 35 1.2 71 4.8 0.1 1 12 1087 1098 1087 1101 0.84
24 35 1.2 71 4.8 0.1 1 12 1134 1145 1134 1148 0.84
25 35 1.2 71 4.8 0.1 1 12 1181 1192 1181 1195 0.84
26 35 1.2 71 4.8 0.1 1 12 1228 1239 1228 1242 0.84
27 35 1.2 71 4.8 0.1 1 12 1275 1286 1275 1289 0.84
28 35 1.2 71 4.8 0.1 1 12 1322 1333 1322 1336 0.84
29 35 0.00017 0.01 16.9 0.2 1 23 1369 1392 1369 1392 0.93
30 35 6.5e-06 0.0004 21.3 2.7 1 23 1398 1420 1398 1420 0.98
31 35 0.00011 0.0065 17.5 0.4 1 20 1427 1446 1427 1448 0.92
32 35 0.00011 0.0065 17.5 0.4 1 20 1516 1535 1516 1537 0.92
33 35 0.032 1.9 9.7 1.2 5 23 1595 1616 1590 1616 0.82
34 35 7.8e-05 0.0047 17.9 0.8 1 21 1623 1643 1623 1644 0.92
35 35 0.96 59 5.0 3.4 1 23 1662 1685 1662 1685 0.89

Sequence Information

Coding Sequence
ATGATTTGCCTAGACACAGAGAGTAAACTGTATCCGCTCAACAAATACAATTTGGACACAAAGTTTGAATATCTGACAGGATTTTCtCTTCACGATGTAGAGAATTTTCTGCCACAGTTTTGCATTGAGTGCGCTCAGAGGCTGACCACTTGTAGTAGCTTCAGAGAAAAGGCCCTCAGAGCGTATCACTTGTTGCTAGAAGTAGCTGAGAACAGTCAAGAGGTGGTTAAAAAAGAGAAGGTTTCTGCTAAAAAGGAGGAGAATGGTACAAAAGGGGGGGATGCATTGGCGCAGTTTAAAGTGACATTGCTGAGTTTTGAAGAACAGTTGGCTGAAATAGAGAAGAGACGGGAGAGCGCTAACTTCAAATATTCTAGATATAAATGCAACAAGTGCTTCAAAGGATTTAGTAGTGTTCCTACATATGAAAGTCATATGGAGAAGCATACTAATAAATTCGGTGAATTCGAGTGCGAAGTGTGCAAGGTCCACGTGAAGAGCGACTACCTGCTGCGGCACCACGTGCGCCACACGCACAGCGTGCGCTACACGTGCGGCAGCTGTCCCTTTGTCACCAACCAGAAATTGTCAGCGATACGTCATGAGGGTTGGCATGCGGGCAAAACATTCAAATGCCCGCACTGCGATGAAGAGTATAGTAAAAGAACGTCCTACTTGTCCCACCTAAGGGTCTCACATCCCACCGATGTCGTGTGCACGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACATGAACCTCAAACACCGCTTCGACGACGCGCAGGTGAGCACTACACTCCTCCTGCGGGTCTCACAGCGCACTGACGCGGTGTGCACGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACGTGAACCTCAAACACCGCTTCGACGACGCGCAGGTGAGCACTACACTCCTCCTGCGGGTCTCACAGCGCACTGACGCGGTGTGCACGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACATGAACCTCAAACACCGCTTCGACGACGCGCAGGTGAGCACTACACTCCTCCTGAGGGTCTCACATCCCACCGATGTCGTGTGCACGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACATGAACCTCAAACACCGCTTCGACGACGCGCAGGTGAGCACTACACTCCTCCTGCGGGTCTCACAGCCCACTGAAGCGGTGTGCACGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACATGCACCTCAAACACCGCTTCGACGACGCGCAGGTGAGCACTACACTCCTCCTGCGGGTCTCACAGCGCACTGACGCGGTGTGGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACATGAACCTCAAACACCGCTTTGACGACGCGCAGGTGTGCACTACACTCCTCCTGCGGGTCTCACAGCGCACGGACGCGGTGTGCGCGttgtgcgggttctccttcatcaaCGAGTGGGGTCTCAACATGCACATGAACCTCAAACACCGCTTCGACGACGCGCAGGTGAGCACTACACTCCTCCTGCGGGTCTCACAGCGCACTGACGCGGTGTGCACGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACATGACCCTCAAACACCGCTTCGACGACGCGCAGGTGAGCACTACACTCCTCCTGCGGGTCTCACAGCGCACTGACGCGGTGTGCACGttgtgcgggttctccttcatcaaCGAGAGGGGTCTCAACATGCACATGACCCTCAAACACCGCTTCGACGACGCGCAGAGCGCGGCGGGTCCGCTGTGCGCGCCGTGCGGCATCCGCTTCGCGTCGCAGACCGCCTACGCGCAGCACCTCGAGGTGTCGCCCAAACACACGTCAGCCGATAAATTGAAAGTGAACGCTCCGAAGAGACCTCGCAAAAACCGCCTCAAACCTTTGGACTGTGAGACGCTGGAGTGTGAACAATGCGGGGTTCAAGTGAGGAGTTACAAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACACACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAAATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAAATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGGTGAGCCGAGCCGCAGGCGGGTCATGTCACGAGATGTACAGCACGCACTTCAACAGATTCCACCCGGACAAGACTCGGACCCAGTACCCGGCGCACTCGCCGCAGCGCTTCCtgtgcgagcagtgtggacgagTCTTTAAGaatcaatgGGGGCTGAGAGACCACGTGCTGGTGAAACATTCCGGCGTAAAGGAATTCGTCTGCGACACTTGCAACAAGTCGTTCTGCCTCAAGGCGAGCCTCACAGCGCACATGAAGACGCACAGCGACTCGCAGCCGACGCACGCGTGCCCGATATGCGGCAAGCACTTCACCAGCAAGGCCAACACCAACAGGCATGTACTGGTGAGTGAACGTAACAGAGTTCGTCTGCGACACGCGCAACAAGTCGTTCTGCCTCAAGGCGAGCCTCACAGCGCACATGAAGACGCACAGCGACTCGCAGCCGACGCACGCGTGCCCGATATGCGGCAAGCACTTCACCAGCAAGGCCAACACCAACAGGCATGTACTGCGCACATGAAGACGCACAGCGACTCGCAGCCGACGCACGCGTGCCCGATATGCGGCAAGCACTTCACCAGCAAGGCCAACACCAACAGGCATGTACTGGTGAGTGAACGTAACAGAGTTCGTCTGCGACACGCGCAACAAGTCGTTCTGCCTCAAGGCGAGCCTCACAGCGCACATGAAGACGCACAGCGACTCGCAGCCGACGCACGCGTGCCCGATATGCGGCAAGCACTTCACCAGCAAGGCCAACACCAACAGGCATGTACTGAGTTCGTCTGCGACACGCGCAACAAGTCGTTCTGCCTCAAGGCGAGCCTCACAGCGCACATGAAGACGCACAGCGACTCGCAGCCGACGCACGCGTGCCCGATATGCGGCAAGCACTTCACCAGCAAGGCCAACACCAACAGGCATCTACTATCAACAACATCTTTCGAAGACAGCTACAGTGTTACGCACAGAGAGTCGCGCCCCTTCAAGTGCCACGCGTGCGAGAAGACATTCGTGAACGGCTCGTCGCGGCGCTACCACGAGCTGCACGCGCACCTCAAGCAGCCGTGGCCCAAGAAGAACCGCGGCCCGCGCCAGAGGGCCAGCCGCGCGCGCCACACCAAGGAGGCCGTGTACACCATGTGGCCCAAGGTGAGAGTCGAGAAGACATTCGTGAACGGCTCGTCGCGGCGCTACCACGAGCTGCACGCGCACCTCAAGCAGCCGTGGCCCAAGAAGAACCGCGGCCCGCGCCAGAGGGCCAGCCGCGCGCGCCACACCAAGGAGGCCGTGTAG
Protein Sequence
MICLDTESKLYPLNKYNLDTKFEYLTGFSLHDVENFLPQFCIECAQRLTTCSSFREKALRAYHLLLEVAENSQEVVKKEKVSAKKEENGTKGGDALAQFKVTLLSFEEQLAEIEKRRESANFKYSRYKCNKCFKGFSSVPTYESHMEKHTNKFGEFECEVCKVHVKSDYLLRHHVRHTHSVRYTCGSCPFVTNQKLSAIRHEGWHAGKTFKCPHCDEEYSKRTSYLSHLRVSHPTDVVCTLCGFSFINERGLNMHMNLKHRFDDAQVSTTLLLRVSQRTDAVCTLCGFSFINERGLNMHVNLKHRFDDAQVSTTLLLRVSQRTDAVCTLCGFSFINERGLNMHMNLKHRFDDAQVSTTLLLRVSHPTDVVCTLCGFSFINERGLNMHMNLKHRFDDAQVSTTLLLRVSQPTEAVCTLCGFSFINERGLNMHMHLKHRFDDAQVSTTLLLRVSQRTDAVWLCGFSFINERGLNMHMNLKHRFDDAQVCTTLLLRVSQRTDAVCALCGFSFINEWGLNMHMNLKHRFDDAQVSTTLLLRVSQRTDAVCTLCGFSFINERGLNMHMTLKHRFDDAQVSTTLLLRVSQRTDAVCTLCGFSFINERGLNMHMTLKHRFDDAQSAAGPLCAPCGIRFASQTAYAQHLEVSPKHTSADKLKVNAPKRPRKNRLKPLDCETLECEQCGVQVRSYKMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKVSRAAGGSCHEMYSTHFNRFHPDKTRTQYPAHSPQRFLCEQCGRVFKNQWGLRDHVLVKHSGVKEFVCDTCNKSFCLKASLTAHMKTHSDSQPTHACPICGKHFTSKANTNRHVLVSERNRVRLRHAQQVVLPQGEPHSAHEDAQRLAADARVPDMRQALHQQGQHQQACTAHMKTHSDSQPTHACPICGKHFTSKANTNRHVLVSERNRVRLRHAQQVVLPQGEPHSAHEDAQRLAADARVPDMRQALHQQGQHQQACTEFVCDTRNKSFCLKASLTAHMKTHSDSQPTHACPICGKHFTSKANTNRHLLSTTSFEDSYSVTHRESRPFKCHACEKTFVNGSSRRYHELHAHLKQPWPKKNRGPRQRASRARHTKEAVYTMWPKVRVEKTFVNGSSRRYHELHAHLKQPWPKKNRGPRQRASRARHTKEAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00354756;
90% Identity
iTF_00354756;
80% Identity
iTF_00354756;