Cgly021956.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- -
- Assembly
- GCA_963855885.1
- Location
- OY979651.1:4158309-4170424[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.12 7.6 7.8 0.9 2 23 160 181 159 181 0.95 2 23 0.019 1.1 10.4 1.8 1 23 187 209 187 209 0.90 3 23 0.00029 0.018 16.1 1.0 1 23 214 236 214 236 0.98 4 23 0.00029 0.018 16.1 1.0 1 23 267 289 267 289 0.98 5 23 0.00029 0.018 16.1 1.0 1 23 320 342 320 342 0.98 6 23 0.00029 0.018 16.1 1.0 1 23 400 422 400 422 0.98 7 23 0.00029 0.018 16.1 1.0 1 23 453 475 453 475 0.98 8 23 0.65 40 5.6 3.3 1 23 482 505 482 505 0.98 9 23 0.0027 0.17 13.1 0.3 1 23 511 533 511 533 0.98 10 23 0.002 0.12 13.5 0.2 1 23 632 654 632 654 0.98 11 23 0.002 0.12 13.5 0.2 1 23 753 775 753 775 0.98 12 23 0.002 0.12 13.5 0.2 1 23 874 896 874 896 0.98 13 23 0.002 0.12 13.5 0.2 1 23 995 1017 995 1017 0.98 14 23 0.002 0.12 13.5 0.2 1 23 1116 1138 1116 1138 0.98 15 23 0.002 0.12 13.5 0.2 1 23 1237 1259 1237 1259 0.98 16 23 0.002 0.12 13.5 0.2 1 23 1358 1380 1358 1380 0.98 17 23 0.002 0.12 13.5 0.2 1 23 1479 1501 1479 1501 0.98 18 23 0.002 0.12 13.5 0.2 1 23 1600 1622 1600 1622 0.98 19 23 0.033 2 9.7 0.1 1 19 1721 1739 1721 1741 0.93 20 23 0.002 0.12 13.5 0.2 1 23 1807 1829 1807 1829 0.98 21 23 0.002 0.12 13.5 0.2 1 23 1928 1950 1928 1950 0.98 22 23 0.01 0.63 11.2 0.1 1 23 2049 2071 2049 2071 0.94 23 23 0.0047 0.29 12.3 0.5 1 23 2077 2100 2077 2100 0.97
Sequence Information
- Coding Sequence
- ATGCCAGAAGTGATTCGAAGACAGAAAAGACGGCATATATTAAGTGAAAGTGACATAAGGTTAAGAAAACACTACAAACTTCCAACGCAAATATGCAAAGACTGTCTCAAGAACCTTAACATagcaaacaaattcaaaaagacTTGCCTTGAAGCTGAGAGAATCTGTGAAAATCTTCTGAAGGACTCAGTAAAGGTTCAAACGCCTGTTAATAAAGTTGTTAAGGAAGAACAGCATGAGAACGGGAAATTCAACTTTAGAAGTTATGTACATGATCATGATTATGGATGCAGATTTGATGAAGATCAAGGCAATATCACAAATGTGTCGACAGTGAAACGTGAGATCAGTCCAGCTAAGGAGCTACCAGGGTACCAGAACGTTGCAGGAACTGATAATATTGATACTAGTGTAAACAATACCTTGCCAGTACAGACCGTTAAAGCCAGAACACAGACCAAGCGACCAATCTCTCTGCAATGCAGATGGTGCAAAACCAAGTTCAAAAGCCGGGAGGAGGCAGTCAAACATAAAGAGGTGCACAAAAGGAAACCACCCTATATATGtaagGTGTGCGGCAAGAGTTTTAATAACTACACAGCACACTACCAGCACGTGCGGGCGCATCGCCGGCCCGACCACGAGTGCGACCACTGCGGCTACCGCACCGCTGTCAAGTACGCGCTGGTCGTGCACATGCGCATCCACTCAGGTGAGCTGGCGCCCGAGACGAAGGCGAGCGGATCGCACGACTACACAGCGCACTACCAGCACGTGCGGGCGCATCGCCGGCCCGACCACGAGTGCGACCACTGCGGCTACCGCACCGCTGTCAAGTACGCGCTGGTCGTGCACATGCGCATCCACTCAGGTGAGCTGGCGCCCGAGACGAAGGCGAGCGGATCGCACGACTACACAGCGCACTACCAGCACGTGCGGGCGCATCGCCGGCCCGACCACGAGTGCGACCACTGCGGCTACCGCACCGCTGTCAAGTACGCGCTGGTCGTGCACATGCGCATCCACTCAGGTGAGCTGGCGCCCGAGACGAAGGCGAGCGGATCGAACGACTACACAGCGACGTGCGGGCGCATCGCCGGCCCGACCACGAGTGAGCTGGCGCCCGAGACGAAGGCGAGCGGATCGCACGACTACACAGCGCACTACCAGCACGTGCGGGCGCATCGCCGGCCCGACCACGAGTGCGACCACTGCGGCTACCGCACCGCTGTCAAGTACGCGCTGGTCGTGCACATGCGCATCCACTCAGGTGAGCTGGCGCCCGAGACGAAGGCGAGCGGATCGCACGACTACACAGCGCACTACCAGCACGTGCGGGCGCATCGCCGGCCCGACCACGAGTGCGACCACTGCGGCTACCGCACCGCTGTCAAGTACGCGCTGGTCGTGCACATGCGCATCCACTCAGATGGCCCGAGGAGGTACAAATGCGACAAATGCCCGAGCGCGCACCACACTTTGTCCAATCTGGTGAAACACCGGAACACGGTGCACGAGCGTATGCGGCGCTTCACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCAGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACGGGCGCGGCGACCTGGACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACACGCACAGCGACATCAAGCGGTGCGTCCTTGTCTTACACGCGGTGCACGAGCGCGCGCTACACGTGCCACGTGTGCGGCGCGACGTTCTACGGGCGCGGCGACCTGGACGAGCACGTCGACGGGCACAGCGACATCAAGCGATTCGAGTGCGAGGTGTGCAAATTAAAGCTTGCGACGAGGTATAACTGGAAGGTGCACATGCTGAAGCAGCACGGCGTGGTCGTGCCGCCGCGCAAGCCCGGCCGGAGGAAGGTCTACGAGATCGTGGACGACGACGGGACGGGAGACCAGGCCCACGGGTGGACATACCACGCGGCAGCGGCACGGAGCTAA
- Protein Sequence
- MPEVIRRQKRRHILSESDIRLRKHYKLPTQICKDCLKNLNIANKFKKTCLEAERICENLLKDSVKVQTPVNKVVKEEQHENGKFNFRSYVHDHDYGCRFDEDQGNITNVSTVKREISPAKELPGYQNVAGTDNIDTSVNNTLPVQTVKARTQTKRPISLQCRWCKTKFKSREEAVKHKEVHKRKPPYICKVCGKSFNNYTAHYQHVRAHRRPDHECDHCGYRTAVKYALVVHMRIHSGELAPETKASGSHDYTAHYQHVRAHRRPDHECDHCGYRTAVKYALVVHMRIHSGELAPETKASGSHDYTAHYQHVRAHRRPDHECDHCGYRTAVKYALVVHMRIHSGELAPETKASGSNDYTATCGRIAGPTTSELAPETKASGSHDYTAHYQHVRAHRRPDHECDHCGYRTAVKYALVVHMRIHSGELAPETKASGSHDYTAHYQHVRAHRRPDHECDHCGYRTAVKYALVVHMRIHSDGPRRYKCDKCPSAHHTLSNLVKHRNTVHERMRRFTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRSARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDGRGDLDAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDTHSDIKRCVLVLHAVHERALHVPRVRRDVLRARRPGRARRHAQRHQAVRPCLTRGARARATRATCAARRSTGAATWTSTSTRTATSSGASLSYTRCTSARYTCHVCGATFYGRGDLDEHVDGHSDIKRFECEVCKLKLATRYNWKVHMLKQHGVVVPPRKPGRRKVYEIVDDDGTGDQAHGWTYHAAAARS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -