Cgly024197.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- -
- Assembly
- GCA_963855885.1
- Location
- OY979654.1:1438478-1465686[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.024 1.5 10.1 2.0 1 23 561 583 561 583 0.98 2 26 6.7e-05 0.0041 18.1 0.8 1 23 649 672 649 672 0.97 3 26 0.00075 0.046 14.8 0.0 3 23 678 699 676 699 0.96 4 26 0.00075 0.046 14.8 0.0 3 23 723 744 721 744 0.96 5 26 0.00075 0.046 14.8 0.0 3 23 768 789 766 789 0.96 6 26 0.00075 0.046 14.8 0.0 3 23 813 834 811 834 0.96 7 26 0.00075 0.046 14.8 0.0 3 23 858 879 856 879 0.96 8 26 0.00075 0.046 14.8 0.0 3 23 903 924 901 924 0.96 9 26 0.00075 0.046 14.8 0.0 3 23 948 969 946 969 0.96 10 26 0.00075 0.046 14.8 0.0 3 23 993 1014 991 1014 0.96 11 26 0.00075 0.046 14.8 0.0 3 23 1038 1059 1036 1059 0.96 12 26 0.00075 0.046 14.8 0.0 3 23 1083 1104 1081 1104 0.96 13 26 0.00075 0.046 14.8 0.0 3 23 1128 1149 1126 1149 0.96 14 26 0.17 11 7.4 0.1 3 21 1161 1179 1160 1184 0.93 15 26 1.2 74 4.7 0.2 3 23 1226 1247 1224 1247 0.96 16 26 0.0011 0.067 14.3 1.8 1 23 1257 1279 1257 1279 0.97 17 26 0.091 5.5 8.3 1.0 2 23 1285 1307 1284 1307 0.93 18 26 0.016 1 10.6 1.2 1 23 1315 1338 1315 1338 0.95 19 26 0.091 5.5 8.3 1.0 2 23 1344 1366 1343 1366 0.93 20 26 0.016 1 10.6 1.2 1 23 1374 1397 1374 1397 0.95 21 26 0.091 5.5 8.3 1.0 2 23 1403 1425 1402 1425 0.93 22 26 0.016 1 10.6 1.2 1 23 1433 1456 1433 1456 0.95 23 26 0.091 5.5 8.3 1.0 2 23 1462 1484 1461 1484 0.93 24 26 0.091 5.5 8.3 1.0 2 23 1502 1524 1501 1524 0.93 25 26 0.01 0.61 11.3 1.5 1 23 1532 1554 1532 1554 0.96 26 26 0.0073 0.45 11.7 3.7 1 23 1563 1586 1563 1586 0.96
Sequence Information
- Coding Sequence
- ATGATATGTCTGGACACACGCCGTAAGCTGTACCTGTCGAGTACATACAATTTAGATTCGGAATATGAGAACCTCACTGGAATTTCGCTGGGAGATGTGGTCAACTTCACGCCGATGTTCTGCAGCGAGTGCGCTCAGCGGCTGGTGAACTGTGGCAAGTTCAGAGACAAGAGTCTGAGAGCCTTCCAGCTGCTGGCGGAGCTGCTTCACAACAATGCAGTGGTGAGAAACTCTTACATTATCGACTCCACGCCGATGTTCTGCAGCGAGTGCGCTCAGCAGCTGGTGAACTGCGGCAAGTTCAGAGACAAGAGTCTGAGAGCCTTCCAGCTGCTGGCGGAGCTGTTTCACAACAATGCAGTGGTGAGAAACTCTTACACAATCAACTTCACGCCGATGTTCTGCAGCGAGTGCGCTCAGCGGCTGGTGAACTGCTGCAAGCTCAGACACAAGAGTCTGAGAGCCTTCCAGCTGCTGGCGGAGCTGCTTCACAACAATGCAGTGGTGAGAAACTCTTACACAATCAACTTCACGCCGATGTTCTGCAGCGAGTGCGTTCAGTGGCTGGTGAACTGTGGCAAGTTCAGAGACAAGAGTCTGCGAGCCTTCCAGCTGCTGACGGAGCTGCTTCACAACAATGCAGTGGTGAGCAACTCTTACATTATCAACATCACACCGATGTTCTGCAGCGAGTGCGCTCAGCGGCTGGTGAACTGTGGCAAGTTCAGAGACAAGAGTCTGAGAGCCTTCCAGCTTCTGACGGAGCTGCTTCACAACAATGCAGTGGTGAGACACTCTTACATTATCAACTTCACGCCGATGTTCTGCAGCGAGTGCGCTCAGCGGCTGGTGAACTGTGGCAAGTTCAGAGACAAGAGTCTGAGAGCCTTCCAGCTTCTGACGGAGCTGCTTCACAACAATGCAGTGTTCAGAGACAAGAGTCTGAGAGCCTTCCAGCTTCTGACGGAGCTGCTTCACAACAATGCAGTGGTGAGCAACTCTTACATTATCAACTTCACACCGATGTTCTGCAGCGAGTGCGCTCAGCGGCTGGTGAACTGTGGCAAGTTCAGAGACAAGAGTCTGAGAGCCTTCCAGCTGCTGGCGGAGCTGCTTCACAACAATGCAGTGGTGAGAAACTCTTACACAATCAACTTCACGCCGATGTTCTGCAGCGAGTGCGCTCAGCGGCTGTTGTCGCTGCAGACGCTGTCGTCGGTGGACCGCGCGCGCTGTCAGCTGACGTCCAGCGTCGTGAAGAAGACGTTCGAGCCCGACCACTGCGACCTATATGTGACGGAGGACACTGGGGGCGTTGACAAGgTTGACATGAAAAATGCAAAAATCGATTTACACGAGAAGTTGAAAGAAGAGGATGAAAGTAAATTTGATCTGGAGTCAGAATCTGGTGGTTttagtgatgatgataatgcaGTGTTCAATGCAGATGACTTCGACACAGATGTAGAAATAACTTACGATGAAGCGCACAATGCTGTAGATGCAGTGTATATTGATGACTCTTCAAACGATGAATTTTATAATCATGGAGACAGTAAAAATTTACAAGGATCAAAATTTGAAACGTTAAAATGGATTAAAAGAATTGAACGGAGTCCCGAGGAGCAATTGTCTGACTGGGCGCAGAGACAGGAGTACAAGGGATACAAGGAGGCTCCCTTCAAATGTACCGACTGCTACAAGCCCTTCCTGAACGAGAAAACTTACAACTTGCACATGGAGAAACACACCGACAAATATGGTCCAGTCGAGTGTCACATATGTCGCGTCCGCAAGAAAAGTCGATTGTACTTGTTGAAGCATTTTCAAGCCACTCACAAGTACCTTCACCGCTGCACAGAGTGCGCAGCCTTCGTCACCAGCAACCCGTTcgtattaagTAAGACGGCGATCGACCACTCCCTCTTCCACGACGGCAAGACGTACAAGTGTGAACAATGTGGAAAAGTGTTCATCAAACCGACGTCATACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGTCAGTACAGTGCACTACAACCACGTGCGTCTCTCTCACCCGTCCGACATCGCGTGCGCGCTGTGCGGGTACTCCTTCGCGAACCAGCGCGGGCTGTATTTGCACCTGAGGATGGCGCATCGCGGCATCAAGCAGGAGTTGTCCGGTCCAGACTGCGAGCAGTGCAACGTGCGCTTCGCGAGCGAGGCTGCGTATAAGACTCATCTGCAGGTGTCGCCCAAGCACGGGATCCCCGGTAAACAGCTGAAACGAAACGACGCGTCTTCGGGAATAAGCGGAGGTTGGAACTTTAAGCGCGCTGCAGCCGGGAGGAAACGAAGGCGAAGCGTGACTCGATGCGTCACAAATTGTGAACTGTGCGACGCCGTGCTGGAGAGCCGGCTCTCGTACTCGTGGCACCTGCGCCGGAGCCACCCGGACCGCGCCAACATTCAGCGAGACTTCATGTGCGAGCAGTGCGGCAAGCTGTGCTCTAGCAAATTTAATCTGATCGAGCACGTGTTGAGGCACGGCAGTCCGACGCTGGAGTGCGACGCGTGCGACAAGAAGTTCCACACGACGAACGCTCTGAGGCTGCACGTGTACAAGGTGCACGACGACGCGCGGAGGCACGCGTACCTGTGCGCGCACTGCGCGTACCAGACCAAGGAGAGGGGCAACTTGAAGCGGCACATGCAGATTTTGCACGGCAGTCCGACGCTGGAGTGCGACGCGTGCGACAAGAAGTTCCACACGACGAACGCTCTGAGGCTGCACGTGTACAAGGTGCACGACGACGCGCGGAGGCACGCGTACCTGTGCGCGCACTGCGCGTACCAGACCAAGGAGAGGGGCAACTTGAAGCGGCACATGCAGATTTTGCACGGCAGTCCGACGCTGGAGTGCGACGCGTGCGACAAGAAGTTCCACACGACGAACGCTCTGAGGCTGCACGTGTACAAGGTGCACGACGACGCGCGGAGACACACGTACCTGTGCGCGCACTGCGCGTACCAGACCAAGGAGAGGGGCAACTTGAAGCGGCACATGCAGATTTTGCACGGCAGTCCGACGCTGGAGTGCGACGCGTGCGACAAGAAGTTCCACACGACGAACGCTCTGAGGCTGCACGTGTACAAGGTGCACGACGACGCGCGGAGACACGCGTACCTGTGCGCGCACTGCGCTCCGACGCTGGAGTGCGACGCGTGCGACAAGAAGTTCCACACGACGAACGCTCTGAGGCTGCACGTGTACAAGGTGCACGACGACGCGCGGAGACACGCGTACCTGTGCGCGCACTGCGCGTACCAGACCAAGGAGAGGGGCAACTTGAAGCGGCACATGCAGGTCCATATGGAATCAGACGAGAGGACATGGTTCCAGTGTTCATTCTGCGAGACAAAGACCACAACGAGTACATCGCTGAAATCCCACATGCTGCACGTGCATGAGAAGGTGCCGTGGCCGACGAGGaccgcgttgccgctccgcaaGTCCGCGTTGCCGCTCCGAAAGTTCGCGTTGCCGGTCCGCAAgtgcgcgttgccgctccgaAAGTtcgcgttgccgctccgcaaGTGCGCGTTGCCGTCCCGCGAGcgcgcgttgccgctccgcaaGTGA
- Protein Sequence
- MICLDTRRKLYLSSTYNLDSEYENLTGISLGDVVNFTPMFCSECAQRLVNCGKFRDKSLRAFQLLAELLHNNAVVRNSYIIDSTPMFCSECAQQLVNCGKFRDKSLRAFQLLAELFHNNAVVRNSYTINFTPMFCSECAQRLVNCCKLRHKSLRAFQLLAELLHNNAVVRNSYTINFTPMFCSECVQWLVNCGKFRDKSLRAFQLLTELLHNNAVVSNSYIINITPMFCSECAQRLVNCGKFRDKSLRAFQLLTELLHNNAVVRHSYIINFTPMFCSECAQRLVNCGKFRDKSLRAFQLLTELLHNNAVFRDKSLRAFQLLTELLHNNAVVSNSYIINFTPMFCSECAQRLVNCGKFRDKSLRAFQLLAELLHNNAVVRNSYTINFTPMFCSECAQRLLSLQTLSSVDRARCQLTSSVVKKTFEPDHCDLYVTEDTGGVDKVDMKNAKIDLHEKLKEEDESKFDLESESGGFSDDDNAVFNADDFDTDVEITYDEAHNAVDAVYIDDSSNDEFYNHGDSKNLQGSKFETLKWIKRIERSPEEQLSDWAQRQEYKGYKEAPFKCTDCYKPFLNEKTYNLHMEKHTDKYGPVECHICRVRKKSRLYLLKHFQATHKYLHRCTECAAFVTSNPFVLSKTAIDHSLFHDGKTYKCEQCGKVFIKPTSYYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQVSTVHYNHVRLSHPSDIACALCGYSFANQRGLYLHLRMAHRGIKQELSGPDCEQCNVRFASEAAYKTHLQVSPKHGIPGKQLKRNDASSGISGGWNFKRAAAGRKRRRSVTRCVTNCELCDAVLESRLSYSWHLRRSHPDRANIQRDFMCEQCGKLCSSKFNLIEHVLRHGSPTLECDACDKKFHTTNALRLHVYKVHDDARRHAYLCAHCAYQTKERGNLKRHMQILHGSPTLECDACDKKFHTTNALRLHVYKVHDDARRHAYLCAHCAYQTKERGNLKRHMQILHGSPTLECDACDKKFHTTNALRLHVYKVHDDARRHTYLCAHCAYQTKERGNLKRHMQILHGSPTLECDACDKKFHTTNALRLHVYKVHDDARRHAYLCAHCAPTLECDACDKKFHTTNALRLHVYKVHDDARRHAYLCAHCAYQTKERGNLKRHMQVHMESDERTWFQCSFCETKTTTSTSLKSHMLHVHEKVPWPTRTALPLRKSALPLRKFALPVRKCALPLRKFALPLRKCALPSRERALPLRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -