Basic Information

Insect: Coenonympha glycerion
Gene Symbol: -
Assembly: GCA_963855885.1
Location: OY979651.1:7717718-7724346[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 9.5e-10 8.6e-07 29.2 0.1 4 38 160 195 157 197 0.90

2 3 3.9e-09 3.6e-06 27.2 0.1 4 38 197 232 194 237 0.90

3 3 3.8e-09 3.5e-06 27.3 0.0 4 38 283 318 280 323 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	9.5e-10	8.6e-07	29.2	0.1	4	38	160	195	157	197	0.90
2	3	3.9e-09	3.6e-06	27.2	0.1	4	38	197	232	194	237	0.90
3	3	3.8e-09	3.5e-06	27.3	0.0	4	38	283	318	280	323	0.90

Sequence Information

Coding Sequence: ATGAGTGAAGAAATCACATGTGGTAGATGCAAGTGCTGTTTAGGCAACAGCGAGTTGAGGAGTTTATGGGAGAGACACGACGTCGAAGGAGAAAAAGAGAATTACGGAGAAATACTGAAAGAATGTTTCGGGATAGAATGGCAGTCTAATAGTACAGACCTAATATGCGGGGATTGTGTTGTACGTTTACGAGAAGCGAATCACTTTAAGTGGGAAATCATGGCCACCCAGGAGTTACTTCACGAAGCTGTTTTAAATATCAATGTGGATGTAGACATAAGCTATATAAAAACAGAAGTGATGGAAAATGATGACTCCGTGGAGGACACCTACGAGAGAGTGGAGTATCTGGATGATGAGCATGATTATGTGCTGCCCTCAAATTCGCGAGACTCTGTACCAGAGCGAAAACTCAAGTATCCTAAGAAGAAGCCGCGATCCGAACGCAACAAGACTTACAAGCAGTACTCCCGGAGCGACCTGGAGGAGGCGGCGCGCCTGGTGAGCAGCGGCGAGCTGACGAGCCGCAACGCCGCCACGCTGTACGGCATCCCCAGAGCCACCCTGCAGGCGAAGTACTCCCGGAGCGACCTGGAGGAGGCGGCGCGCCTGGTGAGCAGCGGCGAGCTGACGAGCCGCAACGCCGCCACGCTGTACGGCATCCCCAGAGCCACCCTGAAGGCGAAGGTCAACACGCTGCACTGCAGTGAGGAAGGTGAGCGCCTGACAGTGATGACGCAACGACACTCACGAGCAGTACTCCCGGAGCGACCTGGAGGAGGCGGCGCGCCTGGTGAGCAGCGGCGAGCTGACGAGCCGCAACGCCGCCACGCTTACTCCCGGAGCGACCTGGAGGAGGCGGCGCGCCTGGTGAGCAGCGGCGAGCTGACGAGCCGCAACGCCGCCACGCTGTACGGCATCCCCAGAGCCACCCTGAAGGCGAAGGTCAACACGCTGCACTGCAGTGAGGAAAGTGAGCGCCTGACAGTGATGACGCAACGACACTCACGAGCAGTACTCCCGGAGCGACCTGGAGGAGGCGGCGCGCCTGTTGATGACGACAAGAAAGCCAGCAACGAGAGGCATCACGCGTTCATAGAAGAGATCAAAACGCTCCTCAGCTACACCAACGCTATACCGTTCCGGACCAAGCTGTGCAGGTACTACTGCTTCTACTGCACCACCCTCGGACCCATCTTCGATGAGCCGGAAGACTTGAGGAACCACACCAATACGGAACACTCCCGGGAAAGGATCACCAGCATTGAAACCTGCATGACGCCCCAGTGGGTCAACGAGGTCATCAAGCTCAACGTTCAAGGCCTCCAGTGCGCAGAGTGCCTCGTACTGCTACCGGATTGGAACCAGATGTTCGTGCACTTCGCTGAGATCCACTCAATTGGCTTCGACCAAGCCTACACCAGAGTCATACCATACGCGTTGACTCCGGCACTGAAGTGTGTGCTGTGCCACGAACTATTCCACAACTACGGGTATCTGGACGCACATATGAACCTGCACTACAGCAACCACATCTGCCACGAGTGCGGAGCCCCGTTCCTGGCCTTGTCGAGACTAGACAAGCATCTCAAAGTGCACAAGGTCGGGAGTTACCCCTGCAGTGTTTGCAACAAAGTGTTCACATTAGACAAGTACAGAGCGAAGCACTTTGCATTCGTACACAACCAATCATGTGACACAAAGTGTCTGTATTGCCCGGAGAAGTTCCTCGGTCCAATTCAACGGCACATGCACCTCCTGGAGAAGCATAAGGACAAAGTGAAGACCATCACGTGTGAAGTGTGCGGTAAAGTGTTCACTTGGAAGCCATACTTTGATCGGCATGTACGTAGAACTCATAAGGGTGTGAAGAACTATAAGTGCAGCATTTGTGATAAGGCATTCCTGCTGCCTCACGAGCTGAAGAAGCATGAACAGAAGCACTCAGGGGGTCTGGTGTACGAATGCGGGGAGTGTGGTGCTGCAACGAATAACATGATGGATTTCACGGCGCATCTGCAAGGGCACGAGGAAGCCGGACTAGTGGATGGTGTGGGACAGACATCTTGTGAAATCAAATCTGAGTGCGAGTAA
Protein Sequence: MSEEITCGRCKCCLGNSELRSLWERHDVEGEKENYGEILKECFGIEWQSNSTDLICGDCVVRLREANHFKWEIMATQELLHEAVLNINVDVDISYIKTEVMENDDSVEDTYERVEYLDDEHDYVLPSNSRDSVPERKLKYPKKKPRSERNKTYKQYSRSDLEEAARLVSSGELTSRNAATLYGIPRATLQAKYSRSDLEEAARLVSSGELTSRNAATLYGIPRATLKAKVNTLHCSEEGERLTVMTQRHSRAVLPERPGGGGAPGEQRRADEPQRRHAYSRSDLEEAARLVSSGELTSRNAATLYGIPRATLKAKVNTLHCSEESERLTVMTQRHSRAVLPERPGGGGAPVDDDKKASNERHHAFIEEIKTLLSYTNAIPFRTKLCRYYCFYCTTLGPIFDEPEDLRNHTNTEHSRERITSIETCMTPQWVNEVIKLNVQGLQCAECLVLLPDWNQMFVHFAEIHSIGFDQAYTRVIPYALTPALKCVLCHELFHNYGYLDAHMNLHYSNHICHECGAPFLALSRLDKHLKVHKVGSYPCSVCNKVFTLDKYRAKHFAFVHNQSCDTKCLYCPEKFLGPIQRHMHLLEKHKDKVKTITCEVCGKVFTWKPYFDRHVRRTHKGVKNYKCSICDKAFLLPHELKKHEQKHSGGLVYECGECGAATNNMMDFTAHLQGHEEAGLVDGVGQTSCEIKSECE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00354729;
90% Identity: iTF_00354729;
80% Identity: iTF_00354729;