Cgly021414.1
Basic Information
- Insect
- Coenonympha glycerion
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_963855885.1
- Location
- OY979650.1:7781643-7787287[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-14 1e-11 45.0 0.0 1 39 34 73 34 78 0.93 2 2 9.1e-19 8.3e-16 58.1 0.0 1 43 242 285 242 287 0.95
Sequence Information
- Coding Sequence
- ATGCTGACAGATTCGATGTTCGAAAAGTTGGAAGCTTTCGAGATATTAAAACGGGCAGTCCTCGAAGGGTCCAGTAACAGCGCGACGAGACGAGCCTACACTGAGGATGAACTCCAATCAGCTCTTCGGGAAATCCAATCGGGACGACTCggcacgcgccgcgccgccgtccTCTACGGCATCCCTCGCTCGACCCTACGGAATAAGGTCAACAAATTCGGCCTCACGTCCGACACCGGCCAGGAGTCGGACCCGGACAGCGAGCCTGACAAACCGGAGTCACCTCCCTCCGTCATACTCAAAATACCGACCTTCCCGCCCCCTGACGACAAGAGCCCTTCCCCTGCCACCCCAGTCACGACCCCCGTCACCCCGATAACTCCCATCCTCCCTCAACCGACCCTCAACCCAGCATCCCAGTTCATGCCCCTCTCGGTCTTCGCGGACCCGCAGCCGCCGACCCAACAAATCTTCACATCCCTAAGTGATGTTATAGCGAAGAGCATCAGCCAAAAGTTCCAGCAGCCTCTAGACAGGCCCCAACCTTCCGACCTACCTTTTCTCCGAGCGCCCGACAGACACGTGTCCGTCATCAAAACCCCTCCAGACAACCAGAGGAACTACGCGATGCCGAGCAATTCGAAGGTGAACTCCAACAATAACGGCCAGCCGGCCACGGGGGGGAAGGGGACGAGGCCGAAGCGCGGGAAGTACAGGAACTACGACAGAGACAGCCTCGTGGAAGCCGTGAAAGCGGTCCAGCGAGGAGAGATGTCGGTCCACCGCGCCGGATCGTACTACGGCGTGCCGCATTCAACTTTAGAGTATAAGGTCAAGGAGAGACATTTGATGAGGCCGCGGAAACGAGAGCCGAAGCCTCAGCCTCAGGACATCAAACCTCAGCCGCCGAAACCTCCTCCGAAACCGCCGACGAAGCCGTTCACCAACGGGTTGAACGGTCCCGAAGGTGGTTACCCTCCTGGGTATCCGTTCTGGCCGGGCGCCGGGTTCGCGCCGCCGCCGGCTCCGGATCTATACGCATCGCATATGATGAGACGGTTGCGGGAGGAGGCGCCTCCGCCGGCGAACGGGTCGTTTCTGGAAGGAATCATCCGGTCTAGTTTGGAGCGGCCTGGCGCGGCGTTGCTGCAGAGATTGAGCGCGCCTCCCGCGTCTCCTCCGGGTGGGTCCATGAGGAGGCGAGCTTCTCCCGGAGAGGAACCTCTGGCGCGTCGACCGCGGCTGGACTCTGATCACCAGCTAGCCGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGAGCGAAGGAGCTCCGGCCGCGTAACGGTACCCCGACCCCACCGCCTGCGTCGCCGGCCGAAAGCGCGGGCTGCGGGGAGCGCGCCTAG
- Protein Sequence
- MLTDSMFEKLEAFEILKRAVLEGSSNSATRRAYTEDELQSALREIQSGRLGTRRAAVLYGIPRSTLRNKVNKFGLTSDTGQESDPDSEPDKPESPPSVILKIPTFPPPDDKSPSPATPVTTPVTPITPILPQPTLNPASQFMPLSVFADPQPPTQQIFTSLSDVIAKSISQKFQQPLDRPQPSDLPFLRAPDRHVSVIKTPPDNQRNYAMPSNSKVNSNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPQDIKPQPPKPPPKPPTKPFTNGLNGPEGGYPPGYPFWPGAGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLSAPPASPPGGSMRRRASPGEEPLARRPRLDSDHQLAAEMREAVQRLRAKELRPRNGTPTPPPASPAESAGCGERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01078995;
- 90% Identity
- iTF_01021109;
- 80% Identity
- -