Basic Information

Insect: Coenonympha arcania
Gene Symbol: stc
Assembly: GCA_036785405.1
Location: CM072066.1:14738321-14763577[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3 3.3e+04 -4.5 1.6 15 19 685 689 684 689 0.81

2 14 0.069 7.6e+02 1.1 1.2 2 10 717 725 717 725 0.93

3 14 4.5e-05 0.49 11.3 16.9 4 19 733 748 731 748 0.93

4 14 4.5e-08 0.00049 20.9 13.6 1 19 784 802 784 802 0.97

5 14 1.7 1.8e+04 -3.3 0.3 8 11 807 810 806 810 0.86

6 14 0.0004 4.4 8.3 13.2 1 19 843 861 843 861 0.98

7 14 3.1e-06 0.034 15.0 15.8 1 19 902 919 902 919 0.99

8 14 3 3.3e+04 -5.0 1.7 6 10 949 953 949 953 0.95

9 14 0.0042 46 5.0 7.3 1 12 959 970 959 970 0.94

10 14 0.06 6.6e+02 1.3 0.3 3 10 973 980 972 981 0.92

11 14 7.9e-06 0.086 13.7 14.8 1 19 986 1004 986 1004 0.92

12 14 0.066 7.2e+02 1.2 17.2 1 18 1043 1059 1043 1060 0.81

13 14 1.5e-07 0.0016 19.3 11.8 1 17 1096 1114 1096 1120 0.85

14 14 0.019 2e+02 2.9 13.1 1 18 1126 1148 1126 1149 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3	3.3e+04	-4.5	1.6	15	19	685	689	684	689	0.81
2	14	0.069	7.6e+02	1.1	1.2	2	10	717	725	717	725	0.93
3	14	4.5e-05	0.49	11.3	16.9	4	19	733	748	731	748	0.93
4	14	4.5e-08	0.00049	20.9	13.6	1	19	784	802	784	802	0.97
5	14	1.7	1.8e+04	-3.3	0.3	8	11	807	810	806	810	0.86
6	14	0.0004	4.4	8.3	13.2	1	19	843	861	843	861	0.98
7	14	3.1e-06	0.034	15.0	15.8	1	19	902	919	902	919	0.99
8	14	3	3.3e+04	-5.0	1.7	6	10	949	953	949	953	0.95
9	14	0.0042	46	5.0	7.3	1	12	959	970	959	970	0.94
10	14	0.06	6.6e+02	1.3	0.3	3	10	973	980	972	981	0.92
11	14	7.9e-06	0.086	13.7	14.8	1	19	986	1004	986	1004	0.92
12	14	0.066	7.2e+02	1.2	17.2	1	18	1043	1059	1043	1060	0.81
13	14	1.5e-07	0.0016	19.3	11.8	1	17	1096	1114	1096	1120	0.85
14	14	0.019	2e+02	2.9	13.1	1	18	1126	1148	1126	1149	0.82

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAACTCTTACAACTATAACAACCAATATCAAGCTCCAAACGCTTGGAATGGGGAATACAACGCACAGTATTCAAACCAACCCCAGTACTATACAAATCCCAGTAGGCAATATGATACCAATCGCCAGTATGTTAGTTTTGATGAGTTTATGTCACAAATGCAAATGTCCAGTGCTCCTGCGACGAATACCTACAATAATATACAGTATCAAAACTATCCCAATGCTCAATATAATGATATTCCTAGTTATCAAAATGGGTCTACACCACAAAGTTCGCAGGCTGAATACGCTTATGGATCGAGCACTGCCAATTTTACTAATAATGAAGAGGTCTATAGACCTAATGTACATAATCAATTTAGCCAAGTAgcagataaaaataattattcgaATGAAATGGTTTTTAAGTCGAAACTAACACCGACTGCAAGTGAATTTGTACCTAAAAGCTCTAACACAAATCCACAATGTGTTCAAAATCAACCTTCACTAGAATCGAATTTATCAAATTTAGAATTAAAGGAATTATCTAGTAATTATTCTAAGCCATCTAGTTCATCTAATTGGAGAGAAAGGCCGAGCAGTTCACAGCAGAGTAGTAATCTATCTAATTTAGAACAATACAGTCAAAAGCAGTATAAAAACCAGGATACAAGTATTCACAACAGTAAACATGACTTGAATAGTATTACCCAGGAAACCACCATATGTAATGAGCCCAGTAATCACAACTCTAGAGACAATTTACTGAAAGAACCCTCAAATAGTACTAGTGAAAACCAAAATCGTAATCTTAAATCCAATAGTCGCAGAAAAGATAAGAAACTAGAATCTAATAATCGCAGAAGAGACATTAAGGATGATTCTCAAAGTCGCAGACAAGACCAAGAAGACACTAGTTATCGTAGGCAAGATAACCAAGGTGATTCTAGTTATCCTAGACAAGATAAAGTTCAAGACCACTCTAGTTCTGGTAATTCAGAAAACCAAGAAGATCCTACAAATAATAGAAAGCATAATAACCAGGAAGACTCAGGTTATCATAGAAGGGAAAATAACCAAGAAGAGCCCAGTTCTCGAAGAAGAGATAATAATCAAGAAGACTCTAGGTATCAGAGAAGAGATAATAACAAGGAAGATTCTAGGTATCGCAGAAGAGATAACCGAGAAGATTCTAGTTATCACAGAAGAGAAAATAACAAAGAAGACTCTAGCTATAATAGAAGAGATAATAACAAAGAAGACTCTAGTTATCGTAGAAGAGATAATAATCAAGAAGATTCAAGTTACCGTAGAAGAGATAATAATCAAGATGACTCTAGTTATCGTAGAAGAGATAATAACAGAGAAGACTCTAGTTATCGAAGAAGAGATAATACCCAAGAATACAGTAGATCAAACAGAAATACCAACTATAACACACAAAACCAAGATCAAAGAGATTCCAGCTACCGTAGAAGAGACAATCAAGAACATAACAGATTTAGTAAAAACAGCAATCATTATACTCAGAACCACAATCAAAACCAATATAATGATCAGAATGTTGTTGACGATGATTATGAAGGAGGCCAATCCAAAAGCAACTCTAAATCTAACACAGAGTCTGATGTATACCGCACTTTTTACAACAGCTCTTTGCCTCAGGAACCACAGGATGTGAGACACAGTAGAGAAGTTTCTGGAAAGAATCGTAAGTGGGTCGGCAGTCAGAGACTCAGGGCTCCGGAGCGCACAGAAGATGAACAGTACGCTAGTTCTTATGTACAATATAGAGAGGAAAAGCAGAATGATAATGTCTCCAGTCCAATGAGAAAGAATAGAGCTTCCAGCTATCAAGTAGGAACAAATATAGAGATGACCCAAAGGGAACGGCTAAGTGAGCAACTAGACAAGGGCACACTGGAGTGCTTGGTGTGCTGCGAGCGGGTGAAGCAGACCGACCCGGTGTGGTACTGCAGTAACTGTCACCATGTGCTGCATCTACGCTGTATACGCAAGTGGGCGATGAGCAGTATTGTTGATACCAAATGGCGCTGCCCGGCCTGCCAGAACACGAATCAGGACATACCGACGGAGTACCGCTGCCTGTGCGGCGCGGTGCGCAACCCCGAGTACCAGCGGGGCTCCACGGGCGCGCACACCTGCGGCCGCGCGTGCAAGCGCGCGAGGAGCTGTCCGCACCCCTGCATGCTGCTCTGTCACCCCGGACCCTGCCCGCCTTGCCAGGCCACCATCAGCAAGCAATGCGGTTGCGGTACGGAAACTCGGTCAGTCCTCTGCAGTAGTAAGCTGCCCCAAGTGTGCGGTCGAGAGTGTAAACGTCAACTGGAGTGCGGCGTGCATTACTGTTCCAAGGAGTGCCACGAAGGACCTTGCGAGCCTTGCACCGAAACTGTAACACAAGTATGCCACTGCCCGGCCGCCAAGTCCCGCTCGGTGCCGTGCACGGCGGAGACGGGGTCGTGCGACACGTGGTCGTGCGGGTCGGCGTGCGGGCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCGTGCCCGCTGTGCCCGCTGCGCCCCGACTGCGTGGACAAGTGCCCGTGCGAAAAAACCGATATCAAGAAAGACCAACGCAAGTCTTGCACCGATCCCATACCGCTTTGTGGCCAAACCTGCGGTAAGGCTCTGACTTGCGGACACCAGTGCGAGGAGCAATGCCATGAAGGGGAATGCCGCGTGTGTCCCAAAAGTTTGCTGCTGCAGTGCCGCTGCGGGCACTCCAGCCGCGAGGTGCCGTGCGTGGACCTGCCCGAGATGCTCTACAACGTGCTGTGCCAGAGGAAGTGTAATAAGAAATTGTCGTGCGGTCGCCATAGATGCCGCACGGTGTGCTGCGACGCGTCGTCTCACCGCTGCGCGGTGGTGTGCGGCCGCATGCTGTCGTGCCAGTCGCACCGCTGCGAGGAGTTCTGCCACACGGGCCACTGCGCGCCGTGCCCCACAGTCAGTTTCGACGAGCTCCGCTGCGAATGTGGCGCACAGGTGATCATGCCGCCGGTGCGCTGCGGCACCAAGCCGCCGCCGTGCAGCGCGCCGTGCACGCGCGAGCGGCGCTGCGGACACCCGCCGCACCACAGCTGCCACTCCGGGGACTGCCCGCCCTGCGTGGTGCTCACCACCAAGAGCTGCTACGGACGACACGAGGAACGCAAAACCATTCCATGCTCACAAGAGGAGTTCTCGTGCGGGCTGCCATGCGGCAAGCCGCTGCCGTGCGGGAAGCACACTTGCATCAACACTTGCCACAAGGGCGCCTGCGACACTGGCAAATGTACCCAACCGTGTATGGAAAAGCGGCCAAGTTGCGGGCACCCGTGCTCCGCGGTGTGCCACTCCAGCAGCGGCGGCACGTGCCCCAGCGGCGCGCCGTGCAAGCGCCCCGTGTGCGCCACGTGCCCCTGCGGCCGCCGCAAGGCTGAGCGCGCCTGCTGCGACAACGCGCGGGACTATGCCAAATTGATGAGCACTTTAGCTGCTTCTAAGATGCAAGAAGGTGGCACACTAGATTTGTCCGAAGTACAGCGTCCGGGATCTATGCTTAAAACATTGGAATGCGACGATGAGTGCTACGTAGAAGCCCGCAGCCGCCGCCTGGCGCTCGCGCTGCAGCTGCGCAACCCGGACGTGTCCGCCAAGCTCGCGCCGCGCTACAGCGAGCACTTGCGCACCACCGCCGTCCGCGAGCCGTCCTTCGCGCAGCAAGTGCACGACCGCCTCACCGAGCTCGTGCAGCTCGCTAAGAAGTCGAAACAGAAGACGAGAGCGCACTCGTTCCCGTCGATGAACCGCCAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGACTCGGAGCCCAACAGGAACGTGGTCGCCACGGCCGACAAGGAGAAGTCGTGGCTGCCCGCGATGAGCGTGCTGGAGGTACTGGCGCGCGAGGCGGGCAAGCGCAAGGTGCCCGGGCccgtgctgcgcgcgcccgcgctgccgccgcccgcgcaacACGCGCACAGCAGCAGTGGCGCCGCTCCCGCTAACAAATCCTCGAGTGGTTGGGCCACTTTGACATCAACGAACGCGTGGGCAGCGCGCAGTCAACCGAAACAGCCGCCCAGACATGAACCCAAACTGGAGCAGAAACGAGAAGCAAAGATAGACTACTTCGACAACCCGCCTGAAAACTAA
Protein Sequence: MSQWNNSYNYNNQYQAPNAWNGEYNAQYSNQPQYYTNPSRQYDTNRQYVSFDEFMSQMQMSSAPATNTYNNIQYQNYPNAQYNDIPSYQNGSTPQSSQAEYAYGSSTANFTNNEEVYRPNVHNQFSQVADKNNYSNEMVFKSKLTPTASEFVPKSSNTNPQCVQNQPSLESNLSNLELKELSSNYSKPSSSSNWRERPSSSQQSSNLSNLEQYSQKQYKNQDTSIHNSKHDLNSITQETTICNEPSNHNSRDNLLKEPSNSTSENQNRNLKSNSRRKDKKLESNNRRRDIKDDSQSRRQDQEDTSYRRQDNQGDSSYPRQDKVQDHSSSGNSENQEDPTNNRKHNNQEDSGYHRRENNQEEPSSRRRDNNQEDSRYQRRDNNKEDSRYRRRDNREDSSYHRRENNKEDSSYNRRDNNKEDSSYRRRDNNQEDSSYRRRDNNQDDSSYRRRDNNREDSSYRRRDNTQEYSRSNRNTNYNTQNQDQRDSSYRRRDNQEHNRFSKNSNHYTQNHNQNQYNDQNVVDDDYEGGQSKSNSKSNTESDVYRTFYNSSLPQEPQDVRHSREVSGKNRKWVGSQRLRAPERTEDEQYASSYVQYREEKQNDNVSSPMRKNRASSYQVGTNIEMTQRERLSEQLDKGTLECLVCCERVKQTDPVWYCSNCHHVLHLRCIRKWAMSSIVDTKWRCPACQNTNQDIPTEYRCLCGAVRNPEYQRGSTGAHTCGRACKRARSCPHPCMLLCHPGPCPPCQATISKQCGCGTETRSVLCSSKLPQVCGRECKRQLECGVHYCSKECHEGPCEPCTETVTQVCHCPAAKSRSVPCTAETGSCDTWSCGSACGRVLSCGAHVCRAPCHAPPCPLCPLRPDCVDKCPCEKTDIKKDQRKSCTDPIPLCGQTCGKALTCGHQCEEQCHEGECRVCPKSLLLQCRCGHSSREVPCVDLPEMLYNVLCQRKCNKKLSCGRHRCRTVCCDASSHRCAVVCGRMLSCQSHRCEEFCHTGHCAPCPTVSFDELRCECGAQVIMPPVRCGTKPPPCSAPCTRERRCGHPPHHSCHSGDCPPCVVLTTKSCYGRHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCINTCHKGACDTGKCTQPCMEKRPSCGHPCSAVCHSSSGGTCPSGAPCKRPVCATCPCGRRKAERACCDNARDYAKLMSTLAASKMQEGGTLDLSEVQRPGSMLKTLECDDECYVEARSRRLALALQLRNPDVSAKLAPRYSEHLRTTAVREPSFAQQVHDRLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDSEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRKVPGPVLRAPALPPPAQHAHSSSGAAPANKSSSGWATLTSTNAWAARSQPKQPPRHEPKLEQKREAKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -