Carc007510.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- grn_1
- Assembly
- GCA_036785405.1
- Location
- CM072061.1:13416493-13421446[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.083 2.7e+02 2.1 0.1 20 27 4 10 2 18 0.66 2 2 1.5e-19 5e-16 58.8 7.5 1 35 66 99 66 100 0.97
Sequence Information
- Coding Sequence
- ATGATGTCTTACCTATGTAAAAGTTGCTTCTATACGAAGAGCAAAGAATCGACACCATTGAATAAAGTGATTGGCCGAACAAGTGTAGTGTATAACAGATACGGATTTCCGAAAGTGACCAAGAATTTGCCAGAATGCTTATCTGATGTCATACATGATTCGCTAcagagcgcggcgcggcgggcgggcaCGTCATGCGCTAACTGCAAGACCACGACGACGACGCTGTGGCGACGCAACCAGAACGGCGAGCCCGTGTGCAACGCGTGCGGACTCTACTACAAACTGCATAATGTTACTATGCTGCGTCTGAGTGCTCGAGATTGCCGTGGTATCAAGAGGCATCATCAGAGAAGGCGAGCGACTCCAACGGACCAGCAGCAGAGGGTCACTGTTGAGGCATCGTTCACGAATCGATGCAGGAGACTCCAGCCCGGTTAA
- Protein Sequence
- MMSYLCKSCFYTKSKESTPLNKVIGRTSVVYNRYGFPKVTKNLPECLSDVIHDSLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNVTMLRLSARDCRGIKRHHQRRRATPTDQQQRVTVEASFTNRCRRLQPG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -