Carc002282.1
Basic Information
- Insect
- Coenonympha arcania
- Gene Symbol
- GATA-B
- Assembly
- GCA_036785405.1
- Location
- CM072057.1:85507-95230[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-18 1.4e-14 54.2 3.5 1 34 168 200 168 202 0.97 2 2 4.2e-18 1.4e-14 54.2 2.7 1 34 235 267 235 269 0.98
Sequence Information
- Coding Sequence
- ATGCCAGCTTGTAACGTTACCGTGTGTgtcagcggcggcggcgcggtgtACGCGCGCTGCGGGTACCCGGCGGCCGGCTCGCCCTACTTCAACGGCGTGGAGCTGGCGCAGACGCAGATATGGACCTGCACCTCCAGCGCGGGTTCGCCCGGctacggcggcgcggcgctgagCGAGGAGCTGGAGGGCAGCGAGGCGGGtgaggcggcgggcggcggcggcggagccCTGCCGGCCTTCAGCGCGCGCTTCGGCGGAGCCttcgcgagcggcgcgcgccccGCGCTCTACGCGCCCGCCGTGCCCGCCAACTCCTACACCCAGGCAGACGTGTGGAGTGTGGAGAGCGGCCGGCGCGCGCAGCTGCCGCCCGCCTCCGCCTGTCTCTCCGCATGTAAGATACGCATACCTCCTACATATTTATTTAGCCCTAGTATTAATCTGTTCTACCTCAATCAGTTCGTGGAGCTGGAGGCGGAGGTGTTCACGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCATCAGCACGCCGCTGTGGCGGCGCGACGGCACCGGGCACTACCTGTGCAACGCGTGCGGGCTCTACAACAAAATGAACGGCATGAACCGCCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGccacgccgcgctcgccgcgcccgcCCCCGACCTGGGCGCCAAGCGGCCGGGCGCGCTGTGCAGCAACTGCCAGACCAGCGTGACGGCGCTGTGGCGGCGCAACGCGCAGGGCGAGACGGTGTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACGGCATCAACAGGCCGCTCGCCATGAAGAAGGACTCCATACAGACGAGAAAGCGAAAACCTAAGAGCGCAACGAACCTGAAAAATAAAGCTAATATCATCAAAAGGGAACTGCACGATTCCGTGAGCTCCAACACGGTGGTGCGTTCTCCGCTCACGTTCGGCTACTACGTgcagcagcaccagcagcagcaacatcagcagcagcaacagcagcagcaccagcagcagcaACTGTCGGTGAAGCTGGAGGAGCCGCCGCCGGCGCACGCACAGCAACTGCCGCACAGCAAGCCCTACTACGAGGAGTACCGGCGCGCCGAGCCCGCCGAGCGCCTCGACCGCCCCACCGTCGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MPACNVTVCVSGGGAVYARCGYPAAGSPYFNGVELAQTQIWTCTSSAGSPGYGGAALSEELEGSEAGEAAGGGGGALPAFSARFGGAFASGARPALYAPAVPANSYTQADVWSVESGRRAQLPPASACLSACKIRIPPTYLFSPSINLFYLNQFVELEAEVFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAALAAPAPDLGAKRPGALCSNCQTSVTALWRRNAQGETVCNACGLYFKLHGINRPLAMKKDSIQTRKRKPKSATNLKNKANIIKRELHDSVSSNTVVRSPLTFGYYVQQHQQQQHQQQQQQQHQQQQLSVKLEEPPPAHAQQLPHSKPYYEEYRRAEPAERLDRPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -