Basic Information

Insect: Coenonympha arcania
Gene Symbol: -
Assembly: GCA_036785405.1
Location: CM072055.1:2797845-2818223[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 9.1 6.7e+02 1.9 3.9 1 23 200 222 200 222 0.92

2 15 0.17 12 7.4 3.6 1 20 288 307 288 309 0.93

3 15 0.048 3.6 9.1 0.2 2 23 327 349 326 349 0.92

4 15 8.9 6.6e+02 1.9 2.9 2 22 387 407 386 410 0.87

5 15 8.9 6.6e+02 1.9 0.3 1 23 442 467 442 467 0.84

6 15 5 3.7e+02 2.7 1.8 2 19 952 969 951 972 0.89

7 15 2.9 2.1e+02 3.5 3.0 2 23 1012 1034 1011 1034 0.92

8 15 0.0089 0.66 11.4 1.6 2 23 1040 1061 1040 1061 0.97

9 15 5.1 3.8e+02 2.7 4.9 2 23 1156 1177 1155 1177 0.91

10 15 0.032 2.4 9.6 0.3 2 23 1232 1253 1231 1253 0.96

11 15 1.3e-06 9.8e-05 23.4 2.2 1 23 1259 1281 1259 1281 0.99

12 15 0.0006 0.044 15.1 0.5 3 23 1288 1308 1286 1308 0.96

13 15 7.1e-05 0.0052 18.0 0.5 2 22 1315 1335 1314 1335 0.95

14 15 2 1.5e+02 4.0 0.2 1 20 1340 1359 1340 1360 0.94

15 15 0.0045 0.34 12.3 3.4 3 23 1372 1393 1371 1393 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	9.1	6.7e+02	1.9	3.9	1	23	200	222	200	222	0.92
2	15	0.17	12	7.4	3.6	1	20	288	307	288	309	0.93
3	15	0.048	3.6	9.1	0.2	2	23	327	349	326	349	0.92
4	15	8.9	6.6e+02	1.9	2.9	2	22	387	407	386	410	0.87
5	15	8.9	6.6e+02	1.9	0.3	1	23	442	467	442	467	0.84
6	15	5	3.7e+02	2.7	1.8	2	19	952	969	951	972	0.89
7	15	2.9	2.1e+02	3.5	3.0	2	23	1012	1034	1011	1034	0.92
8	15	0.0089	0.66	11.4	1.6	2	23	1040	1061	1040	1061	0.97
9	15	5.1	3.8e+02	2.7	4.9	2	23	1156	1177	1155	1177	0.91
10	15	0.032	2.4	9.6	0.3	2	23	1232	1253	1231	1253	0.96
11	15	1.3e-06	9.8e-05	23.4	2.2	1	23	1259	1281	1259	1281	0.99
12	15	0.0006	0.044	15.1	0.5	3	23	1288	1308	1286	1308	0.96
13	15	7.1e-05	0.0052	18.0	0.5	2	22	1315	1335	1314	1335	0.95
14	15	2	1.5e+02	4.0	0.2	1	20	1340	1359	1340	1360	0.94
15	15	0.0045	0.34	12.3	3.4	3	23	1372	1393	1371	1393	0.96

Sequence Information

Coding Sequence: ATGGAAGAAAATAACAGGAAAAGGAGTCGCAAGTCGAAACTGGTTGTGCGAGACTGCAGTATGGACTCCGACGATGAACTTTTAGTTATGCAGCAAGAAATAGAAGCAACATTGGTTCAGTTGAAAAATAAATCCATATTGAAGAAATTGAGCAAGCCCCAAATCACACCCAAACCTGCAGAGTCAACGCGCGCTGTCTCCGTCAAGGTAGAAGTGGAAGAGGTAGAAGATGAGGTGTTAAATGAGCAGCGCGACAGTGAGGCAGACTCCAGCGGAATCATAATAGAATCAGTGATAAGCCTTTCTGAACCGCCGCCGCTCGTACCCATCGCCGGTACGAGCCAAGCCCAAGACGAGGACAAAGAGGAATACTTCAAACTTTCTGAAGAAGCTATAAGAGTGGAATTCGATAAACTATCCAGGAGAACCACAAACCCAGCAGACAAACTAATAGAGATGCACGCTAGGAACATCTTCGGCCGAAAAAGGATACGGCAAGTGACGAACTATGTAGACCAGAGGCTGATGCAAATATTTCGTTGCAAGTGGAAAACTTGGCGCAACCCGTTCCCAGATATTCGCGAGACGCCGCTCCTGTACAAATGTCACAAGTGCAGAAAGGCGTGGTGGCATCTTTACGACTTCAGAGCGCACGTCCTGAGACACAAGAAGTATAAAACTATGGCGATCGAATTACAAACGAACTGCCACGAGAGCTATATGATAGCGTACGGGAATCGACACCTAGCGCACTCTATACTCGAAGATCCAAACCTTAACTATTCTATTCAATCTGTTTGTTGGCGATGCGGCAACGACTACTCGCACCACATGCCGTTGTATTCGCTAACGAACACCAGGTACAGATGCAGTGGGTGCTTGGAAAGGTTTTATACGTGTTCGTTGCTGTTTAATCATGAACACACTTGCACACTGTACAGGCGATCGTTAGCTGGGTCTTCATCGTCGTTTGAAAAGTCTTGCAGTTTGTGCCCCGCGAAGTATAGCACTGAGACGGAGCTATTGCAACACATGGTGCTGCGCCACAGCGTGAGGTCTGATATCCCTGAAGAGTgggtgctcaggaactgcaacCACTGCGAGTACCCCTTCCATATGCAGGTGTTCCACGACTGTCCAGGGAAGCCATATATAACATCGTGCAAGTTTTGCTCACAAAAGTTTAACTCGCACACGTTTGTGCTTATACACCTGAACGTCACCAAGCATCATTTTCCCTGTAGAATTTGCGGATCAATCCTCAGGAAGGAATGCATGGAGTTGCAGCACTTGATGAAGCACACACAGAACTACGTGATTATTTACAAATGTACATACTGTGCCGACCCTAAATATTTTCCCACGGTGAAGTCGGTCAACAACCACAAAGCCATCGCCCACAAAGGACAAGTTGAAAACAAGAATTTGGGGTCTTTTTATGATGTGACAGTGGTTCCTAAAAATAtggtgaaaaatatggaaaatCAATGGATCTTTGAAGAGGACACAAGGAACAATCTAGACAATGCCTATAAAGGTTTTTTGGCCTCGTTAGcAAACAAGGATATGGAAGTCAATTTTTTCAAACATGTGAGAACAGGTCGACCTCGCAAGTTTCCCCAAAACGAATGTCAACAAAATCAACAAGAATCTGTTATAACTATACCTGACAGTCCAGAGGGTATTGAAGAAGATGAAGTGGCAATTATTGAAGATACCCATCAAAATGACATAATTGATATAAGTATGCCTGATGATATACAAGAAATTAACATGAACTCCCAAGAATGTGAACGGGATAATATCAATGTTGACATAGCATCACTGGAACCGCTGCAAGAAAATGATTCCAATGCGTCTGATGATTTGcaagaaaataatgaaattgtCATGAAAAGTCCGGAATATAGTCAGGACATTGTTGAAATAGCATCACCGGAACCGCTGCAAGGAAATGATTCCAATGCGTCTGATGATTTGCAAGAACATAACGAAATTGGCATGGAATCACCCGAAGTTAAACAGGAAATTGTTGACATAGCATCTCCTAAACCTCTGCAAGAAAATGGCCACAACGTGCTTGATGATATGCAAGAAAATAACGAAATTGTCATGAAAACGCccgaaattaaaaaagaaaatattcatATAGTAATAGCTGAAACTCTGCATGAAAATGATTACAATGTGCCTGATGATACGcaagaaaataatgaaattgtCATGAACACGCCCGATATTAAACAGGAAATAGTTGAGATTGCATCACCTAAACCTCAGCAAGAAAATACCAAGGATAAGCTTgataatacacaaaaaaatattaatgaagAAAACATACCTGAAAAAGGGAAAAATGAAAGTATTAATCAGTTGAAGCTACAAATAAAGGAGGAAGTGGGTGAAGAAGACTTTAACAACTGCACGCAGGAGTTAGAAGAACTCATGGAATCTGATATGATAATATTGGATCCTAGGAAGTGCGATTCGATGGAGTACCAGATGGATCCGAGTACGAACCCATCCGTGACTTCAAATGAAGAGGACATGGGGACTTCGGTCGAAGTAGCGCTTGACATCGAATCCAGTCTAAAAagATTTTACAGGTGTAGTAAGTGCCCCTTCGTGGGCATCCACCAAGAGTACCGGCAGCACTTGAAGGACGAGGGTCACCACCCGATCAAGAGAACGACTACAAAAGTGTGCCTAAAGGGGCCCGGGGTCGAGCCCCTGCACAGCTCCTTCGGGGGCTTGCGCCAAACGTACCCGCAGCCCATCCGAAGCGAGGACCACCCCCCGGTCAAGAGGCCGAGGACAAAGGTGCGCCTGAAGAGGCGCGAGGAGAAGCCGCTGCACTGCTCCAAGTGCGACCACGACTTCCCGTCGCCGTACAGATACGTTAGCCACTTTAGCAAGTGCTCCTTCGAGAGTTTTCACCTCGAGTACCGGCAGCACCTGATCGACGAGGGCCACCGCCCGGTCAAGAGGCCGAGGACAAAGGTGCGCCTGAAGAGGCGCGAGGAGAAGCCGCTGCACTGCTCCAAGTGCGACCACGACTTCCCGTCGCCGTACAGATACGTTAGCCACTTTAGCAAGGTGCACAATTACAAGCCGCGGACGTGCCCCAAGTGCTACCACACGTTCCCGACCATGTACGCGCTGCACGTGCACATCATCTCGCACGTGAAGGAGAACTTCCCGCGCATATACGTCATCTCGGCCGAGGACGACGCGCAGAAGGAGCACCGCCTGCAGCTGTGCCAGGTCTGCTCCGAGCCGGTCGCCATGGCCGACTGCTTCGACCACTGGGAGCGGCACCTCGACGTCAACTGCGACCTTGCGGAGAAGACAGTCATGGCGCCGAAGCTGCGGATAGAGAGTGAAGAGTTGAAGAAGATGATACTGCTGCTGCAAGGTTTAAACCCAGACTCGCCAAATGAAAAGGCGCCAATGCATCTGCTGAAGTCCTGCGTGAAGTGCAAGAAGAACTTCGTGCGAAGGAACGAGTGCAAGCGGCACTTCATCGAGCACCTGCTGATAGACGCGGTGCAGAGCCGCCACCGGCACGGCTTCCTCAAGTGCCAGATATGCGCCGAGGAGTTTATAAACGGCGAGAGGAACGAGTGCAAGCGGCACTTCATCGAGCACCTGCTGATAGACGCGGTGCAGAGCCGCCACCGGCACGGCTTCCTCAAGTGCCAGATATGCGCCGAGGAGTTTATAAACGGCGAGAGGTATAAGCGGCACATGCGCGACCACGGCAACCTGCCGCTGTACAAGTGCAACCTGTGCGACAAGGCGTTCAGCGACTCGAGCAACTTCAGCAAGCACAAGAAGGTGCACAACCTGTCGGTGGTCATCTGCGACATCTGCAACAAGAAGTTCACCGCCAAGCGCTTCCTCGAGCAGCACATCAAGTTGCACGAGATAATGGACCCGCTGGTCTGCAACGAGTGCGGCAAGCTGTTCTACTCGGAGTCCAGCTACCGGCGACACATGCGCAAGGGCCGCGCGCAGTTCAAGTGCAAGGTGTGCTACCTCCAGTTCAACGCCGTCAAGAACATGTGGGACCACATGTGGGAGGAACACAGAATGAGGAAGTTGATCGCGGACTGTCCAATCTGCCACATGTCGTTCCGCAAGCACCAAGACGTCAAGAAGCACCTCCGCGAAGACCACGACAACCGCTACTACAAGTACAAACCCAGCAAGCAGCGTCAGAGGACTAAGAGACGACTGGCGCGCGCTGAAAGTGGGGCTGGTCTGGTGGTGGTCGCTCAAGACGAGGGAGGTAGGGAAGTGCACAAAATTGGCAACAGCACGGCGCCGAAGCAACCGAGAGAGAGACGCAAACGGTATCCCGTATTCCAACGAGTGATTGCGTTGCAGGACCCCCGGACACAAGGAACGCCTGAAACGATAACCCGTCCAGCACAGGGAACTGCCTGTCCAGTGCAGGGGTCCGCCAGTTCAGTGCAGGGGACTGCCAGTCCAGTGCAGGGGTCTGCCAGTCCAGTGCAGGGGACTGCCACTCCAGTGCAGGGGACTGCCAGTCCAgttaaaaaacaaagaaaagcgatCAAACGAGTACGTTCAATCCCCTGTGTGATTGCATTACAAGACCCCCGAACAGAACGAATGCCTGAAACAATAACCAGTCCAGCACAGGGAACTGCCAGTCCAGTACAGAGGACTGCCAGTTCAGTGCAGGGGACTGCCAGTCTAGTAAAGGGGACTGCTAGTTTAGCACAAAGGACTGCCAGTTCAGTGCAGAGAACTGCTAGTCCAGTACAGAGGACTGCCAGTTCAGTACAGAGAACTGCCAGTCCAGTGCTGGGGACTGCCAGTTCAGTGCAGGGGACTGCCAGTTCAGTGCAGGGGACTGCCAGTTCAGTACAGGGGACTGCCAGTCCAGTACAGAGGACTGCCAGTTCAGTGCAGAGAACTGCCAGTCCAGTGCAGGGGACTGCCAGTTCAGTGCAGAGGACCATTTCAGTACAGGGGACTGCAATTTCAGTACAGGGGACTGCTAGTTCAGTACAGGGGACTGTCAGTTCAGCACAAGAGACTGTGGTTAAAACTGAACCTGTGGAGTCCTAA
Protein Sequence: MEENNRKRSRKSKLVVRDCSMDSDDELLVMQQEIEATLVQLKNKSILKKLSKPQITPKPAESTRAVSVKVEVEEVEDEVLNEQRDSEADSSGIIIESVISLSEPPPLVPIAGTSQAQDEDKEEYFKLSEEAIRVEFDKLSRRTTNPADKLIEMHARNIFGRKRIRQVTNYVDQRLMQIFRCKWKTWRNPFPDIRETPLLYKCHKCRKAWWHLYDFRAHVLRHKKYKTMAIELQTNCHESYMIAYGNRHLAHSILEDPNLNYSIQSVCWRCGNDYSHHMPLYSLTNTRYRCSGCLERFYTCSLLFNHEHTCTLYRRSLAGSSSSFEKSCSLCPAKYSTETELLQHMVLRHSVRSDIPEEWVLRNCNHCEYPFHMQVFHDCPGKPYITSCKFCSQKFNSHTFVLIHLNVTKHHFPCRICGSILRKECMELQHLMKHTQNYVIIYKCTYCADPKYFPTVKSVNNHKAIAHKGQVENKNLGSFYDVTVVPKNMVKNMENQWIFEEDTRNNLDNAYKGFLASLANKDMEVNFFKHVRTGRPRKFPQNECQQNQQESVITIPDSPEGIEEDEVAIIEDTHQNDIIDISMPDDIQEINMNSQECERDNINVDIASLEPLQENDSNASDDLQENNEIVMKSPEYSQDIVEIASPEPLQGNDSNASDDLQEHNEIGMESPEVKQEIVDIASPKPLQENGHNVLDDMQENNEIVMKTPEIKKENIHIVIAETLHENDYNVPDDTQENNEIVMNTPDIKQEIVEIASPKPQQENTKDKLDNTQKNINEENIPEKGKNESINQLKLQIKEEVGEEDFNNCTQELEELMESDMIILDPRKCDSMEYQMDPSTNPSVTSNEEDMGTSVEVALDIESSLKRFYRCSKCPFVGIHQEYRQHLKDEGHHPIKRTTTKVCLKGPGVEPLHSSFGGLRQTYPQPIRSEDHPPVKRPRTKVRLKRREEKPLHCSKCDHDFPSPYRYVSHFSKCSFESFHLEYRQHLIDEGHRPVKRPRTKVRLKRREEKPLHCSKCDHDFPSPYRYVSHFSKVHNYKPRTCPKCYHTFPTMYALHVHIISHVKENFPRIYVISAEDDAQKEHRLQLCQVCSEPVAMADCFDHWERHLDVNCDLAEKTVMAPKLRIESEELKKMILLLQGLNPDSPNEKAPMHLLKSCVKCKKNFVRRNECKRHFIEHLLIDAVQSRHRHGFLKCQICAEEFINGERNECKRHFIEHLLIDAVQSRHRHGFLKCQICAEEFINGERYKRHMRDHGNLPLYKCNLCDKAFSDSSNFSKHKKVHNLSVVICDICNKKFTAKRFLEQHIKLHEIMDPLVCNECGKLFYSESSYRRHMRKGRAQFKCKVCYLQFNAVKNMWDHMWEEHRMRKLIADCPICHMSFRKHQDVKKHLREDHDNRYYKYKPSKQRQRTKRRLARAESGAGLVVVAQDEGGREVHKIGNSTAPKQPRERRKRYPVFQRVIALQDPRTQGTPETITRPAQGTACPVQGSASSVQGTASPVQGSASPVQGTATPVQGTASPVKKQRKAIKRVRSIPCVIALQDPRTERMPETITSPAQGTASPVQRTASSVQGTASLVKGTASLAQRTASSVQRTASPVQRTASSVQRTASPVLGTASSVQGTASSVQGTASSVQGTASPVQRTASSVQRTASPVQGTASSVQRTISVQGTAISVQGTASSVQGTVSSAQETVVKTEPVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -